RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 CNPY4Q8N129 248 aa17.33■□□□□ 0.37
VSIR-201ENST00000394957 CNTROBQ8N137 903 aa17.33■□□□□ 0.37
VSIR-201ENST00000394957 RNF214Q8ND24 703 aa17.33■□□□□ 0.37
VSIR-201ENST00000394957 MYL6BP14649 208 aa17.33■□□□□ 0.37
VSIR-201ENST00000394957 TERF1P54274 439 aa17.33■□□□□ 0.37
VSIR-201ENST00000394957 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.37
VSIR-201ENST00000394957 SECISBP2LQ93073 1101 aaKnown RBP17.33■□□□□ 0.37
VSIR-201ENST00000394957 C8orf37Q96NL8 207 aa17.33■□□□□ 0.36
VSIR-201ENST00000394957 FMNL2Q96PY5 1086 aa17.33■□□□□ 0.36
VSIR-201ENST00000394957 CCDC173Q0VFZ6 552 aa17.32■□□□□ 0.36
VSIR-201ENST00000394957 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
VSIR-201ENST00000394957 ERC1Q8IUD2 1116 aa17.32■□□□□ 0.36
VSIR-201ENST00000394957 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
VSIR-201ENST00000394957 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
VSIR-201ENST00000394957 PLCD4Q9BRC7 762 aa17.32■□□□□ 0.36
VSIR-201ENST00000394957 ARHGEF10O15013 1369 aa17.32■□□□□ 0.36
VSIR-201ENST00000394957 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
VSIR-201ENST00000394957 HMGN5P82970 282 aaKnown RBP17.32■□□□□ 0.36
VSIR-201ENST00000394957 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
VSIR-201ENST00000394957 CCDC94Q9BW85 323 aaPredicted RBP17.32■□□□□ 0.36
VSIR-201ENST00000394957 DUSP27Q5VZP5 1158 aa17.31■□□□□ 0.36
VSIR-201ENST00000394957 DMTNQ08495 405 aa17.31■□□□□ 0.36
VSIR-201ENST00000394957 CCDC73Q6ZRK6 1079 aa17.31■□□□□ 0.36
VSIR-201ENST00000394957 ERICH2A1L162 156 aa17.31■□□□□ 0.36
VSIR-201ENST00000394957 TRAK2O60296 914 aa17.31■□□□□ 0.36
VSIR-201ENST00000394957 MVPQ14764 893 aaKnown RBP17.31■□□□□ 0.36
VSIR-201ENST00000394957 ZSCAN30Q86W11 494 aa17.31■□□□□ 0.36
VSIR-201ENST00000394957 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 TPM1P09493 284 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 SASS6Q6UVJ0 657 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 CALCOCO1Q9P1Z2 691 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 A0A1W2PP64 1363 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 PLEKHG3A1L390 1219 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 ORAI2Q96SN7 254 aa17.3■□□□□ 0.36
VSIR-201ENST00000394957 SLFN5Q08AF3 891 aa17.29■□□□□ 0.36
VSIR-201ENST00000394957 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
VSIR-201ENST00000394957 ABCC3O15438 1527 aa17.29■□□□□ 0.36
VSIR-201ENST00000394957 PIK3R4Q99570 1358 aa17.29■□□□□ 0.36
VSIR-201ENST00000394957 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
VSIR-201ENST00000394957 TRIM34Q9BYJ4 488 aa17.29■□□□□ 0.36
VSIR-201ENST00000394957 KDM4AO75164 1064 aa17.29■□□□□ 0.36
VSIR-201ENST00000394957 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
VSIR-201ENST00000394957 CEP89Q96ST8 783 aa17.29■□□□□ 0.36
VSIR-201ENST00000394957 DDB1Q16531 1140 aa17.29■□□□□ 0.36
VSIR-201ENST00000394957 CDCA7Q9BWT1 371 aaPredicted RBP17.29■□□□□ 0.36
VSIR-201ENST00000394957 PTPRTO14522 1441 aa17.28■□□□□ 0.36
VSIR-201ENST00000394957 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
VSIR-201ENST00000394957 COL17A1Q9UMD9 1497 aaPredicted RBP17.28■□□□□ 0.36
VSIR-201ENST00000394957 ZPR1O75312 459 aa17.28■□□□□ 0.36
VSIR-201ENST00000394957 CAVIN1Q6NZI2 390 aaKnown RBP17.28■□□□□ 0.36
VSIR-201ENST00000394957 IL2RBP14784 551 aa17.28■□□□□ 0.36
VSIR-201ENST00000394957 LARP1Q6PKG0 1096 aaKnown RBP17.28■□□□□ 0.36
VSIR-201ENST00000394957 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
VSIR-201ENST00000394957 POLKQ9UBT6 870 aa17.28■□□□□ 0.36
VSIR-201ENST00000394957 SAFBQ15424 915 aaKnown RBP eCLIP17.27■□□□□ 0.36
VSIR-201ENST00000394957 IP6K1Q92551 441 aa17.27■□□□□ 0.36
VSIR-201ENST00000394957 TIGD1Q96MW7 591 aa17.27■□□□□ 0.36
VSIR-201ENST00000394957 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.27■□□□□ 0.36
VSIR-201ENST00000394957 SIL1Q9H173 461 aa17.27■□□□□ 0.36
VSIR-201ENST00000394957 PSMA5P28066 241 aa17.27■□□□□ 0.35
VSIR-201ENST00000394957 DCTN1Q14203 1278 aa17.27■□□□□ 0.35
VSIR-201ENST00000394957 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.35
VSIR-201ENST00000394957 SDF4Q9BRK5 362 aa17.27■□□□□ 0.35
VSIR-201ENST00000394957 CNNM1Q9NRU3 951 aa17.27■□□□□ 0.35
VSIR-201ENST00000394957 RABEP1Q15276 862 aa17.26■□□□□ 0.35
VSIR-201ENST00000394957 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
VSIR-201ENST00000394957 PCMTD1Q96MG8 357 aaPredicted RBP17.26■□□□□ 0.35
VSIR-201ENST00000394957 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
VSIR-201ENST00000394957 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
VSIR-201ENST00000394957 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
VSIR-201ENST00000394957 GNL3LQ9NVN8 582 aaKnown RBP17.26■□□□□ 0.35
VSIR-201ENST00000394957 MTMR7Q9Y216 660 aa17.26■□□□□ 0.35
VSIR-201ENST00000394957 TMEM94Q12767 1356 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 NASPP49321 788 aaPredicted RBP17.25■□□□□ 0.35
VSIR-201ENST00000394957 CCDC57Q2TAC2 916 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 CBX1P83916 185 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 IL16Q14005 1332 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 ATP2B1P20020 1258 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 EIF4A2Q14240 407 aaKnown RBP17.25■□□□□ 0.35
VSIR-201ENST00000394957 SKAP1Q86WV1 359 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
VSIR-201ENST00000394957 POLR3AO14802 1390 aaPredicted RBP17.24■□□□□ 0.35
VSIR-201ENST00000394957 SBNO2Q9Y2G9 1366 aa17.24■□□□□ 0.35
VSIR-201ENST00000394957 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
VSIR-201ENST00000394957 AKAP4Q5JQC9 854 aa17.24■□□□□ 0.35
VSIR-201ENST00000394957 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
VSIR-201ENST00000394957 MIS18AQ9NYP9 233 aa17.24■□□□□ 0.35
VSIR-201ENST00000394957 FIBPO43427 364 aa17.24■□□□□ 0.35
VSIR-201ENST00000394957 IPO7O95373 1038 aaKnown RBP17.24■□□□□ 0.35
VSIR-201ENST00000394957 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
VSIR-201ENST00000394957 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
VSIR-201ENST00000394957 MYOM2P54296 1465 aa17.24■□□□□ 0.35
VSIR-201ENST00000394957 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
VSIR-201ENST00000394957 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
VSIR-201ENST00000394957 ANKRD20A12PQ8NF67 263 aa17.23■□□□□ 0.35
VSIR-201ENST00000394957 PPP1R1BQ9UD71 204 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms