RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 MEIS3Q99687 375 aa23.23■■□□□ 1.31
SIL1-202ENST00000394817 CCDC30Q5VVM6 783 aa23.23■■□□□ 1.31
SIL1-202ENST00000394817 NBPF6Q5VWK0 638 aa23.23■■□□□ 1.31
SIL1-202ENST00000394817 NBPF4Q96M43 638 aa23.23■■□□□ 1.31
SIL1-202ENST00000394817 TNS3Q68CZ2 1445 aa23.22■■□□□ 1.31
SIL1-202ENST00000394817 TBC1D2Q9BYX2 928 aa23.21■■□□□ 1.31
SIL1-202ENST00000394817 PXDNLA1KZ92 1463 aa23.21■■□□□ 1.31
SIL1-202ENST00000394817 CRYBG1Q9Y4K1 1723 aa23.2■■□□□ 1.31
SIL1-202ENST00000394817 LRRC59Q96AG4 307 aaKnown RBP23.2■■□□□ 1.3
SIL1-202ENST00000394817 RBM25P49756 843 aaKnown RBP23.19■■□□□ 1.3
SIL1-202ENST00000394817 ZC3H6P61129 1189 aaKnown RBP23.19■■□□□ 1.3
SIL1-202ENST00000394817 FLIIQ13045 1269 aa23.19■■□□□ 1.3
SIL1-202ENST00000394817 F6X3S4 739 aa23.18■■□□□ 1.3
SIL1-202ENST00000394817 CABLES1Q8TDN4 633 aa23.18■■□□□ 1.3
SIL1-202ENST00000394817 SLAIN2Q9P270 581 aa23.18■■□□□ 1.3
SIL1-202ENST00000394817 AXIN2Q9Y2T1 843 aa23.18■■□□□ 1.3
SIL1-202ENST00000394817 SLC4A10Q6U841 1118 aa23.17■■□□□ 1.3
SIL1-202ENST00000394817 PLEKHM2Q8IWE5 1019 aa23.17■■□□□ 1.3
SIL1-202ENST00000394817 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
SIL1-202ENST00000394817 ANKRD24Q8TF21 1146 aa23.16■■□□□ 1.3
SIL1-202ENST00000394817 ANTXR1Q9H6X2 564 aa23.16■■□□□ 1.3
SIL1-202ENST00000394817 OVOS2A0A0G2JMS6 1433 aa23.15■■□□□ 1.3
SIL1-202ENST00000394817 HMMRO75330 724 aa23.15■■□□□ 1.3
SIL1-202ENST00000394817 TBC1D9Q6ZT07 1266 aa23.15■■□□□ 1.3
SIL1-202ENST00000394817 FKBP5Q13451 457 aaPredicted RBP23.14■■□□□ 1.3
SIL1-202ENST00000394817 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.3
SIL1-202ENST00000394817 COL18A1P39060 1754 aa23.14■■□□□ 1.29
SIL1-202ENST00000394817 GSPT1P15170 499 aaKnown RBP23.14■■□□□ 1.29
SIL1-202ENST00000394817 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
SIL1-202ENST00000394817 ADAMTS7Q9UKP4 1686 aa23.13■■□□□ 1.29
SIL1-202ENST00000394817 CDC45O75419 566 aa23.12■■□□□ 1.29
SIL1-202ENST00000394817 TTC22Q5TAA0 569 aa23.12■■□□□ 1.29
SIL1-202ENST00000394817 GNAI2P04899 355 aa23.12■■□□□ 1.29
SIL1-202ENST00000394817 HOXB7P09629 217 aa23.12■■□□□ 1.29
SIL1-202ENST00000394817 AMOTQ4VCS5 1084 aa23.12■■□□□ 1.29
SIL1-202ENST00000394817 SLKQ9H2G2 1235 aaPredicted RBP23.12■■□□□ 1.29
SIL1-202ENST00000394817 PLEKHO1Q53GL0 409 aaPredicted RBP23.11■■□□□ 1.29
SIL1-202ENST00000394817 HDGFL1Q5TGJ6 251 aa23.11■■□□□ 1.29
SIL1-202ENST00000394817 GNAI3P08754 354 aa23.1■■□□□ 1.29
SIL1-202ENST00000394817 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
SIL1-202ENST00000394817 NECTIN2Q92692 538 aa23.1■■□□□ 1.29
SIL1-202ENST00000394817 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
SIL1-202ENST00000394817 TUBGCP6Q96RT7 1819 aa23.1■■□□□ 1.29
SIL1-202ENST00000394817 EIF4A1P60842 406 aaKnown RBP23.1■■□□□ 1.29
SIL1-202ENST00000394817 EIF5BO60841 1220 aaKnown RBP23.09■■□□□ 1.29
SIL1-202ENST00000394817 FRAT2O75474 233 aaPredicted RBP23.09■■□□□ 1.29
SIL1-202ENST00000394817 ERBB3P21860 1342 aa23.08■■□□□ 1.29
SIL1-202ENST00000394817 SOS2Q07890 1332 aaPredicted RBP23.08■■□□□ 1.29
SIL1-202ENST00000394817 C16orf71Q8IYS4 520 aaPredicted RBP23.08■■□□□ 1.28
SIL1-202ENST00000394817 NHSL1Q5SYE7 1610 aa23.07■■□□□ 1.28
SIL1-202ENST00000394817 CHRNA2Q15822 529 aa23.07■■□□□ 1.28
SIL1-202ENST00000394817 SNX21Q969T3 373 aa23.07■■□□□ 1.28
SIL1-202ENST00000394817 CHMP4AQ9BY43 222 aa23.07■■□□□ 1.28
SIL1-202ENST00000394817 TEFQ10587 303 aa23.06■■□□□ 1.28
SIL1-202ENST00000394817 HSCBQ8IWL3 235 aa23.06■■□□□ 1.28
SIL1-202ENST00000394817 OTUD7AQ8TE49 926 aaPredicted RBP23.06■■□□□ 1.28
SIL1-202ENST00000394817 SMARCA5O60264 1052 aaPredicted RBP23.05■■□□□ 1.28
SIL1-202ENST00000394817 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
SIL1-202ENST00000394817 C1orf141Q5JVX7 400 aa23.04■■□□□ 1.28
SIL1-202ENST00000394817 KIF2CQ99661 725 aa23.04■■□□□ 1.28
SIL1-202ENST00000394817 ABCC6O95255 1503 aa23.04■■□□□ 1.28
SIL1-202ENST00000394817 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
SIL1-202ENST00000394817 BTBD11A6QL63 1104 aa23.03■■□□□ 1.28
SIL1-202ENST00000394817 MPRIPQ6WCQ1 1025 aa23.03■■□□□ 1.28
SIL1-202ENST00000394817 PHAXQ9H814 394 aaKnown RBP23.03■■□□□ 1.28
SIL1-202ENST00000394817 SCN11AQ9UI33 1791 aa23.03■■□□□ 1.28
SIL1-202ENST00000394817 OSBPL3Q9H4L5 887 aa23.02■■□□□ 1.28
SIL1-202ENST00000394817 CPDO75976 1380 aa23.02■■□□□ 1.28
SIL1-202ENST00000394817 APBB1O00213 710 aa23.02■■□□□ 1.28
SIL1-202ENST00000394817 ATP8B2P98198 1209 aa23.02■■□□□ 1.28
SIL1-202ENST00000394817 USP44Q9H0E7 712 aa23.01■■□□□ 1.27
SIL1-202ENST00000394817 KCNQ3O43525 872 aa23■■□□□ 1.27
SIL1-202ENST00000394817 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
SIL1-202ENST00000394817 IBTKQ9P2D0 1353 aaPredicted RBP23■■□□□ 1.27
SIL1-202ENST00000394817 PNMA6EA0A0J9YXQ4 647 aa23■■□□□ 1.27
SIL1-202ENST00000394817 SDSP20132 328 aa23■■□□□ 1.27
SIL1-202ENST00000394817 CHPF2Q9P2E5 772 aa23■■□□□ 1.27
SIL1-202ENST00000394817 HEG1Q9ULI3 1381 aa22.99■■□□□ 1.27
SIL1-202ENST00000394817 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
SIL1-202ENST00000394817 LRRFIP2Q9Y608 721 aaKnown RBP22.99■■□□□ 1.27
SIL1-202ENST00000394817 SALL3Q9BXA9 1300 aa22.99■■□□□ 1.27
SIL1-202ENST00000394817 LTBP4Q8N2S1 1624 aa22.99■■□□□ 1.27
SIL1-202ENST00000394817 UBTFL1P0CB47 393 aaPredicted RBP22.98■■□□□ 1.27
SIL1-202ENST00000394817 GSE1Q14687 1217 aa22.98■■□□□ 1.27
SIL1-202ENST00000394817 EXOC6BQ9Y2D4 811 aa22.98■■□□□ 1.27
SIL1-202ENST00000394817 CSB-PGBD3P0DP91 1061 aa22.97■■□□□ 1.27
SIL1-202ENST00000394817 PDE1AP54750 535 aa22.97■■□□□ 1.27
SIL1-202ENST00000394817 LRRCC1Q9C099 1032 aa22.97■■□□□ 1.27
SIL1-202ENST00000394817 SRCIN1Q9C0H9 1055 aa22.97■■□□□ 1.27
SIL1-202ENST00000394817 BCL11AQ9H165 835 aa22.97■■□□□ 1.27
SIL1-202ENST00000394817 CHMP5Q9NZZ3 219 aa22.97■■□□□ 1.27
SIL1-202ENST00000394817 ROBO1Q9Y6N7 1651 aa22.96■■□□□ 1.27
SIL1-202ENST00000394817 PLEKHG2Q9H7P9 1386 aa22.96■■□□□ 1.27
SIL1-202ENST00000394817 CASC1Q6TDU7 716 aa22.96■■□□□ 1.27
SIL1-202ENST00000394817 SPRYD3Q8NCJ5 442 aa22.96■■□□□ 1.27
SIL1-202ENST00000394817 MEGF6O75095 1541 aa22.95■■□□□ 1.26
SIL1-202ENST00000394817 PKD1L3Q7Z443 1732 aa22.95■■□□□ 1.26
SIL1-202ENST00000394817 SSH3Q8TE77 659 aa22.94■■□□□ 1.26
SIL1-202ENST00000394817 DNAAF4Q8WXU2 420 aa22.94■■□□□ 1.26
SIL1-202ENST00000394817 PRDM11Q9NQV5 511 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms