RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ANP32BQ92688 251 aaKnown RBP19.2■□□□□ 0.66
PTBP1-204ENST00000394601 CDC45O75419 566 aa19.19■□□□□ 0.66
PTBP1-204ENST00000394601 HTATSF1O43719 755 aaKnown RBP19.18■□□□□ 0.66
PTBP1-204ENST00000394601 TSPYL4Q9UJ04 414 aa19.18■□□□□ 0.66
PTBP1-204ENST00000394601 PHRF1Q9P1Y6 1649 aaKnown RBP19.18■□□□□ 0.66
PTBP1-204ENST00000394601 F6X3S4 739 aa19.18■□□□□ 0.66
PTBP1-204ENST00000394601 IL17REQ8NFR9 667 aa19.17■□□□□ 0.66
PTBP1-204ENST00000394601 RGPD2P0DJD1 1756 aa19.17■□□□□ 0.66
PTBP1-204ENST00000394601 SMARCA5O60264 1052 aaPredicted RBP19.17■□□□□ 0.66
PTBP1-204ENST00000394601 GAS2L2Q8NHY3 880 aa19.16■□□□□ 0.66
PTBP1-204ENST00000394601 SALL3Q9BXA9 1300 aa19.16■□□□□ 0.66
PTBP1-204ENST00000394601 FSD2A1L4K1 749 aa19.16■□□□□ 0.66
PTBP1-204ENST00000394601 HSP90AB1P08238 724 aaKnown RBP19.16■□□□□ 0.66
PTBP1-204ENST00000394601 AMPHP49418 695 aa19.16■□□□□ 0.66
PTBP1-204ENST00000394601 ZNF142P52746 1687 aaPredicted RBP19.16■□□□□ 0.66
PTBP1-204ENST00000394601 NLRP6P59044 892 aa19.16■□□□□ 0.66
PTBP1-204ENST00000394601 KDM3BQ7LBC6 1761 aa19.15■□□□□ 0.66
PTBP1-204ENST00000394601 USP26Q9BXU7 913 aa19.15■□□□□ 0.66
PTBP1-204ENST00000394601 SDSP20132 328 aa19.14■□□□□ 0.66
PTBP1-204ENST00000394601 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.65
PTBP1-204ENST00000394601 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
PTBP1-204ENST00000394601 RAB3GAP1Q15042 981 aa19.14■□□□□ 0.65
PTBP1-204ENST00000394601 PDCL3Q9H2J4 239 aa19.14■□□□□ 0.65
PTBP1-204ENST00000394601 RTF1Q92541 710 aaKnown RBP19.13■□□□□ 0.65
PTBP1-204ENST00000394601 OSBPL3Q9H4L5 887 aa19.13■□□□□ 0.65
PTBP1-204ENST00000394601 GNAT3A8MTJ3 354 aa19.13■□□□□ 0.65
PTBP1-204ENST00000394601 CEMIPQ8WUJ3 1361 aa19.12■□□□□ 0.65
PTBP1-204ENST00000394601 MAP3K5Q99683 1374 aa19.12■□□□□ 0.65
PTBP1-204ENST00000394601 TNPO1Q92973 898 aaKnown RBP19.12■□□□□ 0.65
PTBP1-204ENST00000394601 CCT4P50991 539 aaKnown RBP19.12■□□□□ 0.65
PTBP1-204ENST00000394601 K7ELQ4 463 aaPredicted RBP19.12■□□□□ 0.65
PTBP1-204ENST00000394601 CIZ1Q9ULV3 898 aaPredicted RBP19.12■□□□□ 0.65
PTBP1-204ENST00000394601 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
PTBP1-204ENST00000394601 LMO7Q8WWI1 1683 aa19.11■□□□□ 0.65
PTBP1-204ENST00000394601 PXDNLA1KZ92 1463 aa19.11■□□□□ 0.65
PTBP1-204ENST00000394601 FLIIQ13045 1269 aa19.1■□□□□ 0.65
PTBP1-204ENST00000394601 FOXD4L5Q5VV16 416 aaPredicted RBP19.1■□□□□ 0.65
PTBP1-204ENST00000394601 FOXD4L4Q8WXT5 416 aaPredicted RBP19.1■□□□□ 0.65
PTBP1-204ENST00000394601 AK9Q5TCS8 1911 aa19.09■□□□□ 0.65
PTBP1-204ENST00000394601 ABTB2Q8N961 1025 aa19.09■□□□□ 0.65
PTBP1-204ENST00000394601 DNTTIP2Q5QJE6 756 aaKnown RBP19.09■□□□□ 0.65
PTBP1-204ENST00000394601 BABAM1Q9NWV8 329 aa19.09■□□□□ 0.65
PTBP1-204ENST00000394601 NASPP49321 788 aaPredicted RBP19.08■□□□□ 0.65
PTBP1-204ENST00000394601 PNMA6EA0A0J9YXQ4 647 aa19.07■□□□□ 0.64
PTBP1-204ENST00000394601 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
PTBP1-204ENST00000394601 SLC4A10Q6U841 1118 aa19.07■□□□□ 0.64
PTBP1-204ENST00000394601 CLEC17AQ6ZS10 378 aa19.07■□□□□ 0.64
PTBP1-204ENST00000394601 DDX49Q9Y6V7 483 aaKnown RBP19.07■□□□□ 0.64
PTBP1-204ENST00000394601 SOS1Q07889 1333 aaPredicted RBP19.07■□□□□ 0.64
PTBP1-204ENST00000394601 NCAPD2Q15021 1401 aa19.07■□□□□ 0.64
PTBP1-204ENST00000394601 PDE1AP54750 535 aa19.07■□□□□ 0.64
PTBP1-204ENST00000394601 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
PTBP1-204ENST00000394601 TPM2P07951 284 aa19.06■□□□□ 0.64
PTBP1-204ENST00000394601 TAF7Q15545 349 aaPredicted RBP19.06■□□□□ 0.64
PTBP1-204ENST00000394601 USHBP1Q8N6Y0 703 aa19.06■□□□□ 0.64
PTBP1-204ENST00000394601 GNAI2P04899 355 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 CCDC30Q5VVM6 783 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 JARID2Q92833 1246 aaPredicted RBP19.05■□□□□ 0.64
PTBP1-204ENST00000394601 SETD1BQ9UPS6 1966 aaKnown RBP19.05■□□□□ 0.64
PTBP1-204ENST00000394601 APBB1O00213 710 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 IP6K1Q92551 441 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 TSC1Q92574 1164 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 IBTKQ9P2D0 1353 aaPredicted RBP19.05■□□□□ 0.64
PTBP1-204ENST00000394601 FAM177BA6PVY3 158 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 NBPF6Q5VWK0 638 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 NBPF4Q96M43 638 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 USP44Q9H0E7 712 aa19.05■□□□□ 0.64
PTBP1-204ENST00000394601 PHF8Q9UPP1 1060 aa19.04■□□□□ 0.64
PTBP1-204ENST00000394601 UQCRHLA0A096LP55 91 aa19.04■□□□□ 0.64
PTBP1-204ENST00000394601 DDX11L8A8MPP1 907 aa19.04■□□□□ 0.64
PTBP1-204ENST00000394601 UQCRHP07919 91 aa19.04■□□□□ 0.64
PTBP1-204ENST00000394601 ATP8B2P98198 1209 aa19.04■□□□□ 0.64
PTBP1-204ENST00000394601 RABEP1Q15276 862 aa19.04■□□□□ 0.64
PTBP1-204ENST00000394601 EXOC6BQ9Y2D4 811 aa19.03■□□□□ 0.64
PTBP1-204ENST00000394601 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
PTBP1-204ENST00000394601 SIPA1L3O60292 1781 aaPredicted RBP19.03■□□□□ 0.64
PTBP1-204ENST00000394601 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
PTBP1-204ENST00000394601 SLIT3O75094 1523 aa19.03■□□□□ 0.64
PTBP1-204ENST00000394601 TRPM3Q9HCF6 1732 aaPredicted RBP19.03■□□□□ 0.64
PTBP1-204ENST00000394601 IGSF3O75054 1194 aa19.03■□□□□ 0.64
PTBP1-204ENST00000394601 CYP2E1P05181 493 aaPredicted RBP19.03■□□□□ 0.64
PTBP1-204ENST00000394601 NECTIN2Q92692 538 aa19.03■□□□□ 0.64
PTBP1-204ENST00000394601 RBM33Q96EV2 1170 aaKnown RBP19.03■□□□□ 0.64
PTBP1-204ENST00000394601 HMMRO75330 724 aa19.02■□□□□ 0.64
PTBP1-204ENST00000394601 FOXD4L6Q3SYB3 417 aaPredicted RBP19.02■□□□□ 0.64
PTBP1-204ENST00000394601 FOXD4L3Q6VB84 417 aaPredicted RBP19.02■□□□□ 0.64
PTBP1-204ENST00000394601 RNF214Q8ND24 703 aa19.02■□□□□ 0.64
PTBP1-204ENST00000394601 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.64
PTBP1-204ENST00000394601 STK31Q9BXU1 1019 aa19.02■□□□□ 0.64
PTBP1-204ENST00000394601 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
PTBP1-204ENST00000394601 PHAXQ9H814 394 aaKnown RBP19.01■□□□□ 0.63
PTBP1-204ENST00000394601 LGR6Q9HBX8 967 aa19.01■□□□□ 0.63
PTBP1-204ENST00000394601 ADAMTSL3P82987 1691 aa19.01■□□□□ 0.63
PTBP1-204ENST00000394601 TSHZ3Q63HK5 1081 aa19.01■□□□□ 0.63
PTBP1-204ENST00000394601 ADAMTS7Q9UKP4 1686 aa19.01■□□□□ 0.63
PTBP1-204ENST00000394601 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
PTBP1-204ENST00000394601 SSFA2P28290 1259 aa19■□□□□ 0.63
PTBP1-204ENST00000394601 EIF4A1P60842 406 aaKnown RBP19■□□□□ 0.63
PTBP1-204ENST00000394601 STAP2Q9UGK3 403 aa19■□□□□ 0.63
PTBP1-204ENST00000394601 PXDNQ92626 1479 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms