RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
PSEN1-204ENST00000394164 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
PSEN1-204ENST00000394164 BMP2KLQ5H9B9 411 aa12.19□□□□□ -0.46
PSEN1-204ENST00000394164 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
PSEN1-204ENST00000394164 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
PSEN1-204ENST00000394164 PTCH1Q13635 1447 aa12.19□□□□□ -0.46
PSEN1-204ENST00000394164 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
PSEN1-204ENST00000394164 ZSCAN23Q3MJ62 389 aa12.19□□□□□ -0.46
PSEN1-204ENST00000394164 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
PSEN1-204ENST00000394164 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
PSEN1-204ENST00000394164 PLEKHM2Q8IWE5 1019 aa12.19□□□□□ -0.46
PSEN1-204ENST00000394164 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
PSEN1-204ENST00000394164 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
PSEN1-204ENST00000394164 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
PSEN1-204ENST00000394164 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
PSEN1-204ENST00000394164 CEP85Q6P2H3 762 aa12.18□□□□□ -0.46
PSEN1-204ENST00000394164 TBX22Q9Y458 520 aa12.18□□□□□ -0.46
PSEN1-204ENST00000394164 C3P01024 1663 aa12.18□□□□□ -0.46
PSEN1-204ENST00000394164 DYNC1I1O14576 645 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 MON2Q7Z3U7 1717 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 RGPD8O14715 1765 aaPredicted RBP12.17□□□□□ -0.46
PSEN1-204ENST00000394164 PIK3R4Q99570 1358 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 ANXA1P04083 346 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 HOXC9P31274 260 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 DMTNQ08495 405 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 PKP1Q13835 747 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 STK31Q9BXU1 1019 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
PSEN1-204ENST00000394164 SPDYE4A6NLX3 237 aa12.16□□□□□ -0.46
PSEN1-204ENST00000394164 KLHL40Q2TBA0 621 aa12.16□□□□□ -0.46
PSEN1-204ENST00000394164 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 LRRC59Q96AG4 307 aaKnown RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 FLT4P35916 1363 aa12.16□□□□□ -0.46
PSEN1-204ENST00000394164 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 CCDC94Q9BW85 323 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 DCTPP1Q9H773 170 aa12.16□□□□□ -0.46
PSEN1-204ENST00000394164 ZKSCAN5Q9Y2L8 839 aa12.16□□□□□ -0.46
PSEN1-204ENST00000394164 K7ELQ4 463 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 ZNF500O60304 480 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 PSME1Q06323 249 aa12.16□□□□□ -0.46
PSEN1-204ENST00000394164 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
PSEN1-204ENST00000394164 IL17REQ8NFR9 667 aa12.16□□□□□ -0.46
PSEN1-204ENST00000394164 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-204ENST00000394164 NCOA3Q9Y6Q9 1424 aa12.15□□□□□ -0.46
PSEN1-204ENST00000394164 TERF1P54274 439 aa12.15□□□□□ -0.46
PSEN1-204ENST00000394164 ANKRD44Q8N8A2 993 aa12.15□□□□□ -0.46
PSEN1-204ENST00000394164 CEP170BQ9Y4F5 1589 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-204ENST00000394164 SYCE3A1L190 88 aa12.15□□□□□ -0.46
PSEN1-204ENST00000394164 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
PSEN1-204ENST00000394164 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-204ENST00000394164 C17orf53Q8N3J3 647 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-204ENST00000394164 SNX21Q969T3 373 aa12.15□□□□□ -0.46
PSEN1-204ENST00000394164 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-204ENST00000394164 AKAP12Q02952 1782 aa12.15□□□□□ -0.46
PSEN1-204ENST00000394164 CDC45O75419 566 aa12.14□□□□□ -0.47
PSEN1-204ENST00000394164 KIF2CQ99661 725 aa12.14□□□□□ -0.47
PSEN1-204ENST00000394164 PHAXQ9H814 394 aaKnown RBP12.14□□□□□ -0.47
PSEN1-204ENST00000394164 CRB1P82279 1406 aa12.14□□□□□ -0.47
PSEN1-204ENST00000394164 SBNO1A3KN83 1393 aa12.14□□□□□ -0.47
PSEN1-204ENST00000394164 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
PSEN1-204ENST00000394164 RBM25P49756 843 aaKnown RBP12.14□□□□□ -0.47
PSEN1-204ENST00000394164 LGR6Q9HBX8 967 aa12.14□□□□□ -0.47
PSEN1-204ENST00000394164 TTC21AQ8NDW8 1320 aa12.14□□□□□ -0.47
PSEN1-204ENST00000394164 SDSP20132 328 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 FLIIQ13045 1269 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 VGLL3A8MV65 326 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 KCNQ3O43525 872 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 NOL8Q76FK4 1167 aaKnown RBP12.13□□□□□ -0.47
PSEN1-204ENST00000394164 RGS12O14924 1447 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 TTC22Q5TAA0 569 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 ORAI2Q96SN7 254 aa12.13□□□□□ -0.47
PSEN1-204ENST00000394164 PNMA6EA0A0J9YXQ4 647 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 PTMSP20962 102 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 CSPP1Q1MSJ5 1256 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 FOXD4L6Q3SYB3 417 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-204ENST00000394164 NBPF6Q5VWK0 638 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 FOXD4L3Q6VB84 417 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-204ENST00000394164 MPRIPQ6WCQ1 1025 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 NBPF4Q96M43 638 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 USP31Q70CQ4 1352 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 IGSF1Q8N6C5 1336 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 MAP4K4O95819 1239 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-204ENST00000394164 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-204ENST00000394164 ATP2B3Q16720 1220 aa12.12□□□□□ -0.47
PSEN1-204ENST00000394164 MTERF4Q7Z6M4 381 aaKnown RBP12.12□□□□□ -0.47
PSEN1-204ENST00000394164 ZBTB22O15209 634 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 HAP1P54257 671 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-204ENST00000394164 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-204ENST00000394164 RILPL2Q969X0 211 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
PSEN1-204ENST00000394164 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
PSEN1-204ENST00000394164 PTPRCP08575 1304 aa12.11□□□□□ -0.47
PSEN1-204ENST00000394164 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms