RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ADAMTS8Q9UP79 889 aa25.15■■□□□ 1.62
PDLIM7-204ENST00000393546 HTATSF1O43719 755 aaKnown RBP25.14■■□□□ 1.62
PDLIM7-204ENST00000393546 TEFQ10587 303 aa25.14■■□□□ 1.62
PDLIM7-204ENST00000393546 ANO8Q9HCE9 1232 aaPredicted RBP25.14■■□□□ 1.62
PDLIM7-204ENST00000393546 LOC102724428A0A0B4J2F2 783 aa25.13■■□□□ 1.61
PDLIM7-204ENST00000393546 SIK1P57059 783 aa25.13■■□□□ 1.61
PDLIM7-204ENST00000393546 NFE2L2Q16236 605 aa25.13■■□□□ 1.61
PDLIM7-204ENST00000393546 SLC15A2Q16348 729 aa25.13■■□□□ 1.61
PDLIM7-204ENST00000393546 VIRMAQ69YN4 1812 aaKnown RBP25.13■■□□□ 1.61
PDLIM7-204ENST00000393546 CCDC184Q52MB2 194 aa25.12■■□□□ 1.61
PDLIM7-204ENST00000393546 ADAMTS7Q9UKP4 1686 aa25.11■■□□□ 1.61
PDLIM7-204ENST00000393546 RUNDC1Q96C34 613 aa25.11■■□□□ 1.61
PDLIM7-204ENST00000393546 RBM42Q9BTD8 480 aaKnown RBP25.11■■□□□ 1.61
PDLIM7-204ENST00000393546 MRS2Q9HD23 443 aa25.1■■□□□ 1.61
PDLIM7-204ENST00000393546 MRC1P22897 1456 aa25.09■■□□□ 1.61
PDLIM7-204ENST00000393546 ATP6V1AP38606 617 aa25.09■■□□□ 1.61
PDLIM7-204ENST00000393546 MCM10Q7L590 875 aa25.09■■□□□ 1.61
PDLIM7-204ENST00000393546 CCDC146Q8IYE0 955 aa25.09■■□□□ 1.61
PDLIM7-204ENST00000393546 CEMIPQ8WUJ3 1361 aa25.08■■□□□ 1.61
PDLIM7-204ENST00000393546 AKT1S1Q96B36 256 aa25.08■■□□□ 1.61
PDLIM7-204ENST00000393546 PTCD1O75127 700 aaKnown RBP25.07■■□□□ 1.6
PDLIM7-204ENST00000393546 DCTN1Q14203 1278 aa25.07■■□□□ 1.6
PDLIM7-204ENST00000393546 TMPOP42166 694 aaKnown RBP25.06■■□□□ 1.6
PDLIM7-204ENST00000393546 RIPK4P57078 832 aa25.06■■□□□ 1.6
PDLIM7-204ENST00000393546 SLC39A6Q13433 755 aa25.06■■□□□ 1.6
PDLIM7-204ENST00000393546 ZNF827Q17R98 1081 aa25.06■■□□□ 1.6
PDLIM7-204ENST00000393546 PAPPAQ13219 1627 aa25.05■■□□□ 1.6
PDLIM7-204ENST00000393546 TFCP2L1Q9NZI6 479 aa25.05■■□□□ 1.6
PDLIM7-204ENST00000393546 TTC5Q8N0Z6 440 aa25.04■■□□□ 1.6
PDLIM7-204ENST00000393546 PNISRQ8TF01 805 aaKnown RBP25.04■■□□□ 1.6
PDLIM7-204ENST00000393546 DLG5Q8TDM6 1919 aa25.04■■□□□ 1.6
PDLIM7-204ENST00000393546 BTBD11A6QL63 1104 aa25.03■■□□□ 1.6
PDLIM7-204ENST00000393546 ITPK1Q13572 414 aa25.03■■□□□ 1.6
PDLIM7-204ENST00000393546 SLC4A9Q96Q91 983 aa25.03■■□□□ 1.6
PDLIM7-204ENST00000393546 LMOD3Q0VAK6 560 aa25.02■■□□□ 1.6
PDLIM7-204ENST00000393546 TAF1LQ8IZX4 1826 aa25.02■■□□□ 1.6
PDLIM7-204ENST00000393546 C5P01031 1676 aa25.01■■□□□ 1.59
PDLIM7-204ENST00000393546 TAF7Q15545 349 aaPredicted RBP25.01■■□□□ 1.59
PDLIM7-204ENST00000393546 NEUROD2Q15784 382 aa25.01■■□□□ 1.59
PDLIM7-204ENST00000393546 ZNF790Q6PG37 636 aa25.01■■□□□ 1.59
PDLIM7-204ENST00000393546 LINC00116Q8NCU8 138 aa25.01■■□□□ 1.59
PDLIM7-204ENST00000393546 AK7Q96M32 723 aa25.01■■□□□ 1.59
PDLIM7-204ENST00000393546 RRP7AQ9Y3A4 280 aaKnown RBP25.01■■□□□ 1.59
PDLIM7-204ENST00000393546 SIPA1L3O60292 1781 aaPredicted RBP24.99■■□□□ 1.59
PDLIM7-204ENST00000393546 ZNF831Q5JPB2 1677 aa24.98■■□□□ 1.59
PDLIM7-204ENST00000393546 VSIG10Q8N0Z9 540 aa24.97■■□□□ 1.59
PDLIM7-204ENST00000393546 FLAD1Q8NFF5 587 aa24.97■■□□□ 1.59
PDLIM7-204ENST00000393546 PDGFDQ9GZP0 370 aaPredicted RBP24.97■■□□□ 1.59
PDLIM7-204ENST00000393546 C4BP0C0L5 1744 aa24.96■■□□□ 1.59
PDLIM7-204ENST00000393546 APAF1O14727 1248 aa24.96■■□□□ 1.59
PDLIM7-204ENST00000393546 RC3H1Q5TC82 1133 aaKnown RBP24.96■■□□□ 1.59
PDLIM7-204ENST00000393546 THUMPD2Q9BTF0 503 aaKnown RBP24.96■■□□□ 1.59
PDLIM7-204ENST00000393546 PNPLA7Q6ZV29 1317 aa24.95■■□□□ 1.58
PDLIM7-204ENST00000393546 DIEXFQ68CQ4 756 aaKnown RBP24.95■■□□□ 1.58
PDLIM7-204ENST00000393546 ZNF496Q96IT1 587 aaPredicted RBP24.95■■□□□ 1.58
PDLIM7-204ENST00000393546 FMNL2Q96PY5 1086 aa24.95■■□□□ 1.58
PDLIM7-204ENST00000393546 MSH5O43196 834 aa24.94■■□□□ 1.58
PDLIM7-204ENST00000393546 KCNQ3O43525 872 aa24.94■■□□□ 1.58
PDLIM7-204ENST00000393546 DNAJC10Q8IXB1 793 aa24.94■■□□□ 1.58
PDLIM7-204ENST00000393546 KCPQ6ZWJ8 1503 aa24.94■■□□□ 1.58
PDLIM7-204ENST00000393546 GNPATO15228 680 aa24.93■■□□□ 1.58
PDLIM7-204ENST00000393546 SPON1Q9HCB6 807 aa24.93■■□□□ 1.58
PDLIM7-204ENST00000393546 MIS18AQ9NYP9 233 aa24.93■■□□□ 1.58
PDLIM7-204ENST00000393546 QSER1Q2KHR3 1735 aa24.92■■□□□ 1.58
PDLIM7-204ENST00000393546 CNTNAP4Q9C0A0 1308 aa24.92■■□□□ 1.58
PDLIM7-204ENST00000393546 ZBTB7AO95365 584 aa24.92■■□□□ 1.58
PDLIM7-204ENST00000393546 COL23A1Q86Y22 540 aaPredicted RBP24.92■■□□□ 1.58
PDLIM7-204ENST00000393546 SLC16A10Q8TF71 515 aa24.92■■□□□ 1.58
PDLIM7-204ENST00000393546 TEX13AQ9BXU3 409 aaPredicted RBP24.92■■□□□ 1.58
PDLIM7-204ENST00000393546 TRIM35Q9UPQ4 493 aa24.92■■□□□ 1.58
PDLIM7-204ENST00000393546 CASZ1Q86V15 1759 aa24.91■■□□□ 1.58
PDLIM7-204ENST00000393546 UBR2Q8IWV8 1755 aa24.91■■□□□ 1.58
PDLIM7-204ENST00000393546 SSFA2P28290 1259 aa24.91■■□□□ 1.58
PDLIM7-204ENST00000393546 FAM9BQ8IZU0 186 aa24.91■■□□□ 1.58
PDLIM7-204ENST00000393546 RTCBQ9Y3I0 505 aaKnown RBP24.91■■□□□ 1.58
PDLIM7-204ENST00000393546 HEG1Q9ULI3 1381 aa24.91■■□□□ 1.58
PDLIM7-204ENST00000393546 CRKLP46109 303 aaKnown RBP24.9■■□□□ 1.58
PDLIM7-204ENST00000393546 MTFR1LQ9H019 292 aa24.9■■□□□ 1.58
PDLIM7-204ENST00000393546 TUBGCP6Q96RT7 1819 aa24.9■■□□□ 1.58
PDLIM7-204ENST00000393546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.89■■□□□ 1.58
PDLIM7-204ENST00000393546 RPS6KA4O75676 772 aa24.89■■□□□ 1.58
PDLIM7-204ENST00000393546 PHF14O94880 888 aa24.89■■□□□ 1.58
PDLIM7-204ENST00000393546 STARD3NLO95772 234 aa24.89■■□□□ 1.58
PDLIM7-204ENST00000393546 CYP19A1P11511 503 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-204ENST00000393546 ATF5Q9Y2D1 282 aaPredicted RBP24.89■■□□□ 1.58
PDLIM7-204ENST00000393546 COL5A3P25940 1745 aaPredicted RBP24.89■■□□□ 1.57
PDLIM7-204ENST00000393546 CCER2I3L3R5 266 aa24.88■■□□□ 1.57
PDLIM7-204ENST00000393546 BABAM1Q9NWV8 329 aa24.88■■□□□ 1.57
PDLIM7-204ENST00000393546 TJP1Q07157 1748 aa24.88■■□□□ 1.57
PDLIM7-204ENST00000393546 CICQ96RK0 1608 aaPredicted RBP24.87■■□□□ 1.57
PDLIM7-204ENST00000393546 TRAPPC3LQ5T215 181 aa24.87■■□□□ 1.57
PDLIM7-204ENST00000393546 SMIM5Q71RC9 77 aa24.87■■□□□ 1.57
PDLIM7-204ENST00000393546 CCDC87Q9NVE4 849 aa24.87■■□□□ 1.57
PDLIM7-204ENST00000393546 TSPYL4Q9UJ04 414 aa24.87■■□□□ 1.57
PDLIM7-204ENST00000393546 UBR3Q6ZT12 1888 aa24.87■■□□□ 1.57
PDLIM7-204ENST00000393546 SNRPA1P09661 255 aaKnown RBP24.86■■□□□ 1.57
PDLIM7-204ENST00000393546 INTS5Q6P9B9 1019 aaKnown RBP24.86■■□□□ 1.57
PDLIM7-204ENST00000393546 AMIGO3Q86WK7 504 aa24.86■■□□□ 1.57
PDLIM7-204ENST00000393546 MYH14Q7Z406 1995 aaKnown RBP24.85■■□□□ 1.57
PDLIM7-204ENST00000393546 ADRA2BP18089 450 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms