RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 UBR1Q8IWV7 1749 aa7.74□□□□□ -1.17
TSPAN8-202ENST00000393330 KCNQ2O43526 872 aa7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 GPBP1L1Q9HC44 474 aaPredicted RBP7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 C6orf229H3BNL8 230 aa7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 NBPF8Q3BBV2 869 aa7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 NBPF14Q5TI25 921 aa7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 UNC5CLQ8IV45 518 aa7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 ANKLE1Q8NAG6 615 aa7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 USB1Q9BQ65 265 aaKnown RBP7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 PCDHGC3Q9UN70 934 aa7.73□□□□□ -1.17
TSPAN8-202ENST00000393330 GPATCH8Q9UKJ3 1502 aaKnown RBP7.72□□□□□ -1.17
TSPAN8-202ENST00000393330 CEP350Q5VT06 3117 aa7.72□□□□□ -1.17
TSPAN8-202ENST00000393330 DCCP43146 1447 aa7.72□□□□□ -1.17
TSPAN8-202ENST00000393330 ASXL1Q8IXJ9 1541 aa7.72□□□□□ -1.17
TSPAN8-202ENST00000393330 UBE2Q2Q8WVN8 375 aa7.72□□□□□ -1.17
TSPAN8-202ENST00000393330 CAMSAP2Q08AD1 1489 aa7.71□□□□□ -1.17
TSPAN8-202ENST00000393330 MAST1Q9Y2H9 1570 aa7.71□□□□□ -1.18
TSPAN8-202ENST00000393330 SLC19A1P41440 591 aa7.71□□□□□ -1.18
TSPAN8-202ENST00000393330 TRIM26Q12899 539 aaPredicted RBP7.71□□□□□ -1.18
TSPAN8-202ENST00000393330 DIXDC1Q155Q3 683 aa7.71□□□□□ -1.18
TSPAN8-202ENST00000393330 KDM4CQ9H3R0 1056 aa7.71□□□□□ -1.18
TSPAN8-202ENST00000393330 MSS51Q4VC12 460 aa7.7□□□□□ -1.18
TSPAN8-202ENST00000393330 FCF1Q9Y324 198 aaKnown RBP7.7□□□□□ -1.18
TSPAN8-202ENST00000393330 V9GY48 417 aaPredicted RBP7.7□□□□□ -1.18
TSPAN8-202ENST00000393330 FAM83GA6ND36 823 aa7.69□□□□□ -1.18
TSPAN8-202ENST00000393330 HSPA6P17066 643 aa7.69□□□□□ -1.18
TSPAN8-202ENST00000393330 PLA2G2CQ5R387 149 aa7.69□□□□□ -1.18
TSPAN8-202ENST00000393330 RIC3Q7Z5B4 369 aa7.69□□□□□ -1.18
TSPAN8-202ENST00000393330 IRX2Q9BZI1 471 aaPredicted RBP7.69□□□□□ -1.18
TSPAN8-202ENST00000393330 DISP2A7MBM2 1401 aa7.69□□□□□ -1.18
TSPAN8-202ENST00000393330 IDI1Q13907 227 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 EZH2Q15910 746 aaKnown RBP7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 CSPP1Q1MSJ5 1256 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 RSBN1LQ6PCB5 846 aaPredicted RBP7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 LIAT1Q6ZQX7 453 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 DDX17Q92841 729 aaKnown RBP7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 EMID1Q96A84 441 aaPredicted RBP7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 PCDHB15Q9Y5E8 787 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 SOS2Q07890 1332 aaPredicted RBP7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 PARD3Q8TEW0 1356 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 CCNB3Q8WWL7 1395 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 PIK3R4Q99570 1358 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 SPHKAPQ2M3C7 1700 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 EFCAB6Q5THR3 1501 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 PLEKHG1Q9ULL1 1385 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 NEUROD2Q15784 382 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 ARHGAP31Q2M1Z3 1444 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 CCDC18Q5T9S5 1454 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 RETREG3Q86VR2 466 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 CAMKK2Q96RR4 588 aa7.68□□□□□ -1.18
TSPAN8-202ENST00000393330 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 MBD5Q9P267 1494 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 MST1RQ04912 1400 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 TSPY4P0CV99 314 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 TSPY10P0CW01 314 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 MTMR2Q13614 643 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 VPS72Q15906 364 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 MYSM1Q5VVJ2 828 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 TNS4Q8IZW8 715 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 FAM117AQ9C073 453 aa7.67□□□□□ -1.18
TSPAN8-202ENST00000393330 CDC42BPAQ5VT25 1732 aa7.66□□□□□ -1.18
TSPAN8-202ENST00000393330 SPTLC1O15269 473 aa7.66□□□□□ -1.18
TSPAN8-202ENST00000393330 MMP16P51512 607 aa7.66□□□□□ -1.18
TSPAN8-202ENST00000393330 CCDC24Q8N4L8 307 aa7.66□□□□□ -1.18
TSPAN8-202ENST00000393330 POLR3EQ9NVU0 708 aa7.66□□□□□ -1.18
TSPAN8-202ENST00000393330 RPRD2Q5VT52 1461 aaKnown RBP7.65□□□□□ -1.18
TSPAN8-202ENST00000393330 MTUS2Q5JR59 1369 aa7.65□□□□□ -1.18
TSPAN8-202ENST00000393330 SPRYD7Q5W111 196 aa7.65□□□□□ -1.18
TSPAN8-202ENST00000393330 SLC52A1Q9NWF4 448 aa7.65□□□□□ -1.18
TSPAN8-202ENST00000393330 LIMD1Q9UGP4 676 aa7.65□□□□□ -1.18
TSPAN8-202ENST00000393330 AMOTL2Q9Y2J4 779 aa7.65□□□□□ -1.18
TSPAN8-202ENST00000393330 ZNF644Q9H582 1327 aaPredicted RBP7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 ZBTB24O43167 697 aaPredicted RBP7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 DXOO77932 396 aaKnown RBP7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 JUNDP17535 347 aa7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 GJA5P36382 358 aa7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 COL13A1Q5TAT6 717 aaPredicted RBP7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 PRR7Q8TB68 274 aa7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 RSPH6AQ9H0K4 717 aa7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 CCDC9Q9Y3X0 531 aaKnown RBP7.64□□□□□ -1.19
TSPAN8-202ENST00000393330 GFRA3O60609 400 aa7.63□□□□□ -1.19
TSPAN8-202ENST00000393330 CABLES1Q8TDN4 633 aa7.63□□□□□ -1.19
TSPAN8-202ENST00000393330 DDRGK1Q96HY6 314 aa7.63□□□□□ -1.19
TSPAN8-202ENST00000393330 CHD2O14647 1828 aaKnown RBP7.63□□□□□ -1.19
TSPAN8-202ENST00000393330 SPDYE5A6NIY4 337 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 ZNF697Q5TEC3 545 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 ZNF598Q86UK7 904 aaKnown RBP7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 ZBTB3Q9H5J0 574 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 MYOM2P54296 1465 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 GLI3P10071 1580 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 SLIT2O94813 1529 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 CD2BP2O95400 341 aaKnown RBP7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 APBA3O96018 575 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 RPIAP49247 311 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 CLK2P49760 499 aaKnown RBP7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 SYT17Q9BSW7 474 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 PDZRN3Q9UPQ7 1066 aa7.62□□□□□ -1.19
TSPAN8-202ENST00000393330 PLEKHG3A1L390 1219 aa7.61□□□□□ -1.19
TSPAN8-202ENST00000393330 QPCTQ16769 361 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms