RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
MKS1-203ENST00000393120 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
MKS1-203ENST00000393120 ZBTB7CA1YPR0 619 aa17.8■□□□□ 0.44
MKS1-203ENST00000393120 GNAI2P04899 355 aa17.8■□□□□ 0.44
MKS1-203ENST00000393120 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
MKS1-203ENST00000393120 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
MKS1-203ENST00000393120 TBC1D2Q9BYX2 928 aa17.8■□□□□ 0.44
MKS1-203ENST00000393120 NFKBIBQ15653 356 aa17.79■□□□□ 0.44
MKS1-203ENST00000393120 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
MKS1-203ENST00000393120 LMOD2Q6P5Q4 547 aa17.79■□□□□ 0.44
MKS1-203ENST00000393120 AXIN2Q9Y2T1 843 aa17.78■□□□□ 0.44
MKS1-203ENST00000393120 ALS2Q96Q42 1657 aa17.78■□□□□ 0.44
MKS1-203ENST00000393120 RNMTO43148 476 aaKnown RBP17.77■□□□□ 0.44
MKS1-203ENST00000393120 TEFQ10587 303 aa17.77■□□□□ 0.44
MKS1-203ENST00000393120 CDC45O75419 566 aa17.76■□□□□ 0.43
MKS1-203ENST00000393120 DEKP35659 375 aaKnown RBP17.76■□□□□ 0.43
MKS1-203ENST00000393120 C1orf141Q5JVX7 400 aa17.76■□□□□ 0.43
MKS1-203ENST00000393120 TTC22Q5TAA0 569 aa17.76■□□□□ 0.43
MKS1-203ENST00000393120 TBC1D9Q6ZT07 1266 aa17.76■□□□□ 0.43
MKS1-203ENST00000393120 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
MKS1-203ENST00000393120 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
MKS1-203ENST00000393120 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
MKS1-203ENST00000393120 ANTXR1Q9H6X2 564 aa17.76■□□□□ 0.43
MKS1-203ENST00000393120 BTBD11A6QL63 1104 aa17.75■□□□□ 0.43
MKS1-203ENST00000393120 GSPT1P15170 499 aaKnown RBP17.75■□□□□ 0.43
MKS1-203ENST00000393120 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
MKS1-203ENST00000393120 ERBB3P21860 1342 aa17.75■□□□□ 0.43
MKS1-203ENST00000393120 PLEKHG2Q9H7P9 1386 aa17.75■□□□□ 0.43
MKS1-203ENST00000393120 NECTIN2Q92692 538 aa17.74■□□□□ 0.43
MKS1-203ENST00000393120 N4BP2Q86UW6 1770 aaPredicted RBP17.74■□□□□ 0.43
MKS1-203ENST00000393120 MPRIPQ6WCQ1 1025 aa17.74■□□□□ 0.43
MKS1-203ENST00000393120 SNX21Q969T3 373 aa17.74■□□□□ 0.43
MKS1-203ENST00000393120 OSBPL3Q9H4L5 887 aa17.74■□□□□ 0.43
MKS1-203ENST00000393120 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
MKS1-203ENST00000393120 NPHP3Q7Z494 1330 aa17.73■□□□□ 0.43
MKS1-203ENST00000393120 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
MKS1-203ENST00000393120 USP44Q9H0E7 712 aa17.73■□□□□ 0.43
MKS1-203ENST00000393120 PXDNQ92626 1479 aa17.73■□□□□ 0.43
MKS1-203ENST00000393120 PHAXQ9H814 394 aaKnown RBP17.72■□□□□ 0.43
MKS1-203ENST00000393120 STRCP1A6NGW2 1772 aa17.72■□□□□ 0.43
MKS1-203ENST00000393120 ABCC6O95255 1503 aa17.71■□□□□ 0.43
MKS1-203ENST00000393120 KCNQ3O43525 872 aa17.71■□□□□ 0.43
MKS1-203ENST00000393120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.43
MKS1-203ENST00000393120 ADAMTS7Q9UKP4 1686 aa17.71■□□□□ 0.43
MKS1-203ENST00000393120 ZC3H6P61129 1189 aaKnown RBP17.7■□□□□ 0.42
MKS1-203ENST00000393120 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
MKS1-203ENST00000393120 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
MKS1-203ENST00000393120 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
MKS1-203ENST00000393120 EIF2S2P20042 333 aaKnown RBP17.69■□□□□ 0.42
MKS1-203ENST00000393120 KIF2CQ99661 725 aa17.69■□□□□ 0.42
MKS1-203ENST00000393120 CHPF2Q9P2E5 772 aa17.69■□□□□ 0.42
MKS1-203ENST00000393120 DBF4Q9UBU7 674 aaPredicted RBP17.69■□□□□ 0.42
MKS1-203ENST00000393120 TNS3Q68CZ2 1445 aa17.69■□□□□ 0.42
MKS1-203ENST00000393120 GIGYF1O75420 1035 aaPredicted RBP17.68■□□□□ 0.42
MKS1-203ENST00000393120 UBTFL1P0CB47 393 aaPredicted RBP17.68■□□□□ 0.42
MKS1-203ENST00000393120 HSCBQ8IWL3 235 aa17.68■□□□□ 0.42
MKS1-203ENST00000393120 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
MKS1-203ENST00000393120 RAPGEF4Q8WZA2 1011 aa17.68■□□□□ 0.42
MKS1-203ENST00000393120 LRRFIP2Q9Y608 721 aaKnown RBP17.68■□□□□ 0.42
MKS1-203ENST00000393120 IBTKQ9P2D0 1353 aaPredicted RBP17.68■□□□□ 0.42
MKS1-203ENST00000393120 SPATA31A3Q5VYP0 1347 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 PNMA6EA0A0J9YXQ4 647 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 SDSP20132 328 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 BEND3Q5T5X7 828 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 SSH3Q8TE77 659 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 LRRCC1Q9C099 1032 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 SALL3Q9BXA9 1300 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 COL18A1P39060 1754 aa17.67■□□□□ 0.42
MKS1-203ENST00000393120 FRAT2O75474 233 aaPredicted RBP17.66■□□□□ 0.42
MKS1-203ENST00000393120 PDE1AP54750 535 aa17.66■□□□□ 0.42
MKS1-203ENST00000393120 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
MKS1-203ENST00000393120 CPDO75976 1380 aa17.66■□□□□ 0.42
MKS1-203ENST00000393120 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
MKS1-203ENST00000393120 CASC1Q6TDU7 716 aa17.66■□□□□ 0.42
MKS1-203ENST00000393120 SPG7Q9UQ90 795 aa17.66■□□□□ 0.42
MKS1-203ENST00000393120 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
MKS1-203ENST00000393120 APBB1O00213 710 aa17.65■□□□□ 0.42
MKS1-203ENST00000393120 POLA2Q14181 598 aa17.65■□□□□ 0.42
MKS1-203ENST00000393120 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
MKS1-203ENST00000393120 DDX17Q92841 729 aaKnown RBP17.65■□□□□ 0.42
MKS1-203ENST00000393120 NLRP2Q9NX02 1062 aa17.65■□□□□ 0.42
MKS1-203ENST00000393120 SIPA1L3O60292 1781 aaPredicted RBP17.65■□□□□ 0.42
MKS1-203ENST00000393120 EXOC6BQ9Y2D4 811 aa17.64■□□□□ 0.42
MKS1-203ENST00000393120 RGPD5Q99666 1765 aa17.64■□□□□ 0.41
MKS1-203ENST00000393120 ADCY9O60503 1353 aa17.64■□□□□ 0.41
MKS1-203ENST00000393120 RAB11FIP3O75154 756 aa17.64■□□□□ 0.41
MKS1-203ENST00000393120 HYPKQ9NX55 129 aa17.64■□□□□ 0.41
MKS1-203ENST00000393120 STAP2Q9UGK3 403 aa17.64■□□□□ 0.41
MKS1-203ENST00000393120 ALDH1L1O75891 902 aa17.63■□□□□ 0.41
MKS1-203ENST00000393120 PHKG2P15735 406 aa17.63■□□□□ 0.41
MKS1-203ENST00000393120 USP26Q9BXU7 913 aa17.63■□□□□ 0.41
MKS1-203ENST00000393120 HSPA2P54652 639 aa17.62■□□□□ 0.41
MKS1-203ENST00000393120 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
MKS1-203ENST00000393120 CHMP5Q9NZZ3 219 aa17.62■□□□□ 0.41
MKS1-203ENST00000393120 AOX1Q06278 1338 aa17.62■□□□□ 0.41
MKS1-203ENST00000393120 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
MKS1-203ENST00000393120 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
MKS1-203ENST00000393120 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
MKS1-203ENST00000393120 CRYBG1Q9Y4K1 1723 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms