RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 WWC1Q8IX03 1113 aa17.71■□□□□ 0.43
PTN-202ENST00000393083 PROM2Q8N271 834 aa17.71■□□□□ 0.43
PTN-202ENST00000393083 LGR6Q9HBX8 967 aa17.71■□□□□ 0.43
PTN-202ENST00000393083 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
PTN-202ENST00000393083 CCDC27Q2M243 656 aa17.7■□□□□ 0.42
PTN-202ENST00000393083 ITGB4P16144 1822 aa17.7■□□□□ 0.42
PTN-202ENST00000393083 MAP3K5Q99683 1374 aa17.7■□□□□ 0.42
PTN-202ENST00000393083 ADAMTS7Q9UKP4 1686 aa17.7■□□□□ 0.42
PTN-202ENST00000393083 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
PTN-202ENST00000393083 RNMTO43148 476 aaKnown RBP17.7■□□□□ 0.42
PTN-202ENST00000393083 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
PTN-202ENST00000393083 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
PTN-202ENST00000393083 IL17REQ8NFR9 667 aa17.69■□□□□ 0.42
PTN-202ENST00000393083 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
PTN-202ENST00000393083 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
PTN-202ENST00000393083 SLFN5Q08AF3 891 aa17.68■□□□□ 0.42
PTN-202ENST00000393083 E9PSI1 815 aa17.67■□□□□ 0.42
PTN-202ENST00000393083 CABP4P57796 275 aa17.67■□□□□ 0.42
PTN-202ENST00000393083 TXNRD1Q16881 649 aa17.67■□□□□ 0.42
PTN-202ENST00000393083 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
PTN-202ENST00000393083 RREB1Q92766 1687 aa17.67■□□□□ 0.42
PTN-202ENST00000393083 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
PTN-202ENST00000393083 NFATC2IPQ8NCF5 419 aa17.66■□□□□ 0.42
PTN-202ENST00000393083 MRC1P22897 1456 aa17.66■□□□□ 0.42
PTN-202ENST00000393083 RIPK4P57078 832 aa17.66■□□□□ 0.42
PTN-202ENST00000393083 WDR63Q8IWG1 891 aa17.66■□□□□ 0.42
PTN-202ENST00000393083 SLC52A2Q9HAB3 445 aa17.66■□□□□ 0.42
PTN-202ENST00000393083 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
PTN-202ENST00000393083 ASAP1Q9ULH1 1129 aa17.66■□□□□ 0.42
PTN-202ENST00000393083 CEMIPQ8WUJ3 1361 aa17.66■□□□□ 0.42
PTN-202ENST00000393083 HTATSF1O43719 755 aaKnown RBP17.65■□□□□ 0.42
PTN-202ENST00000393083 ATG3Q9NT62 314 aa17.65■□□□□ 0.42
PTN-202ENST00000393083 PALLDQ8WX93 1383 aa17.64■□□□□ 0.41
PTN-202ENST00000393083 FKBP8Q14318 412 aa17.64■□□□□ 0.41
PTN-202ENST00000393083 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.41
PTN-202ENST00000393083 SMARCC1Q92922 1105 aaPredicted RBP17.64■□□□□ 0.41
PTN-202ENST00000393083 LRRC4BQ9NT99 713 aa17.64■□□□□ 0.41
PTN-202ENST00000393083 TRIM35Q9UPQ4 493 aa17.64■□□□□ 0.41
PTN-202ENST00000393083 LY75O60449 1722 aa17.63■□□□□ 0.41
PTN-202ENST00000393083 RCAN3Q9UKA8 241 aa17.63■□□□□ 0.41
PTN-202ENST00000393083 NUP188Q5SRE5 1749 aa17.63■□□□□ 0.41
PTN-202ENST00000393083 SLC27A3Q5K4L6 730 aa17.62■□□□□ 0.41
PTN-202ENST00000393083 MCM10Q7L590 875 aa17.62■□□□□ 0.41
PTN-202ENST00000393083 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
PTN-202ENST00000393083 VIRMAQ69YN4 1812 aaKnown RBP17.62■□□□□ 0.41
PTN-202ENST00000393083 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
PTN-202ENST00000393083 KCNQ4P56696 695 aa17.61■□□□□ 0.41
PTN-202ENST00000393083 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
PTN-202ENST00000393083 TEFQ10587 303 aa17.6■□□□□ 0.41
PTN-202ENST00000393083 CCNL1Q9UK58 526 aaPredicted RBP17.6■□□□□ 0.41
PTN-202ENST00000393083 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
PTN-202ENST00000393083 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
PTN-202ENST00000393083 SIPA1L3O60292 1781 aaPredicted RBP17.58■□□□□ 0.41
PTN-202ENST00000393083 LOC102724428A0A0B4J2F2 783 aa17.58■□□□□ 0.41
PTN-202ENST00000393083 SIK1P57059 783 aa17.58■□□□□ 0.41
PTN-202ENST00000393083 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.41
PTN-202ENST00000393083 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.41
PTN-202ENST00000393083 ANO8Q9HCE9 1232 aaPredicted RBP17.58■□□□□ 0.41
PTN-202ENST00000393083 IL16Q14005 1332 aa17.58■□□□□ 0.41
PTN-202ENST00000393083 PAPPAQ13219 1627 aa17.58■□□□□ 0.41
PTN-202ENST00000393083 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
PTN-202ENST00000393083 THUMPD2Q9BTF0 503 aaKnown RBP17.57■□□□□ 0.4
PTN-202ENST00000393083 RRP1P56182 461 aaKnown RBP17.56■□□□□ 0.4
PTN-202ENST00000393083 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
PTN-202ENST00000393083 CALD1Q05682 793 aaKnown RBP17.55■□□□□ 0.4
PTN-202ENST00000393083 ITPK1Q13572 414 aa17.55■□□□□ 0.4
PTN-202ENST00000393083 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
PTN-202ENST00000393083 KCPQ6ZWJ8 1503 aa17.54■□□□□ 0.4
PTN-202ENST00000393083 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
PTN-202ENST00000393083 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
PTN-202ENST00000393083 ATP6V1AP38606 617 aa17.54■□□□□ 0.4
PTN-202ENST00000393083 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
PTN-202ENST00000393083 ZNF827Q17R98 1081 aa17.54■□□□□ 0.4
PTN-202ENST00000393083 ZNF790Q6PG37 636 aa17.54■□□□□ 0.4
PTN-202ENST00000393083 AKT1S1Q96B36 256 aa17.54■□□□□ 0.4
PTN-202ENST00000393083 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
PTN-202ENST00000393083 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
PTN-202ENST00000393083 SLC15A2Q16348 729 aa17.53■□□□□ 0.4
PTN-202ENST00000393083 ZNF831Q5JPB2 1677 aa17.53■□□□□ 0.4
PTN-202ENST00000393083 KCNQ3O43525 872 aa17.53■□□□□ 0.4
PTN-202ENST00000393083 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
PTN-202ENST00000393083 TSR2Q969E8 191 aaKnown RBP17.53■□□□□ 0.4
PTN-202ENST00000393083 STK32BQ9NY57 414 aa17.53■□□□□ 0.4
PTN-202ENST00000393083 PSDA5PKW4 1024 aaPredicted RBP17.52■□□□□ 0.39
PTN-202ENST00000393083 UBR2Q8IWV8 1755 aa17.51■□□□□ 0.39
PTN-202ENST00000393083 C5P01031 1676 aa17.51■□□□□ 0.39
PTN-202ENST00000393083 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
PTN-202ENST00000393083 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
PTN-202ENST00000393083 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
PTN-202ENST00000393083 HMGB2P26583 209 aaKnown RBP17.5■□□□□ 0.39
PTN-202ENST00000393083 TTC5Q8N0Z6 440 aa17.5■□□□□ 0.39
PTN-202ENST00000393083 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
PTN-202ENST00000393083 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
PTN-202ENST00000393083 LAS1LQ9Y4W2 734 aaKnown RBP17.49■□□□□ 0.39
PTN-202ENST00000393083 CICQ96RK0 1608 aaPredicted RBP17.49■□□□□ 0.39
PTN-202ENST00000393083 GNAI1P63096 354 aa17.49■□□□□ 0.39
PTN-202ENST00000393083 ERICH6BQ5W0A0 696 aa17.49■□□□□ 0.39
PTN-202ENST00000393083 C4BP0C0L5 1744 aa17.48■□□□□ 0.39
PTN-202ENST00000393083 TJP1Q07157 1748 aa17.48■□□□□ 0.39
PTN-202ENST00000393083 DNAJC10Q8IXB1 793 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms