RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 CCDC174Q6PII3 467 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 CADPS2Q86UW7 1296 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 RAB3IL1Q8TBN0 382 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 KIAA1524Q8TCG1 905 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 PRPF31Q8WWY3 499 aaKnown RBP4.64□□□□□ -1.67
UBR3-202ENST00000392632 SMTNL1A8MU46 457 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 KIF5BP33176 963 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 ME1P48163 572 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 AMPD3Q01432 767 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 BIRC2Q13490 618 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 HOOK2Q96ED9 719 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 LNPKQ9C0E8 428 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 GBP3Q9H0R5 595 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 PPP6R1Q9UPN7 881 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 PRC1O43663 620 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 MRPS9P82933 396 aaKnown RBP4.64□□□□□ -1.67
UBR3-202ENST00000392632 SPA17Q15506 151 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 TWISTNBQ3B726 338 aaPredicted RBP4.64□□□□□ -1.67
UBR3-202ENST00000392632 PPP1R42Q7Z4L9 355 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 ZGPATQ8N5A5 531 aaKnown RBP4.64□□□□□ -1.67
UBR3-202ENST00000392632 FMNL2Q96PY5 1086 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 DDX23Q9BUQ8 820 aaKnown RBP4.64□□□□□ -1.67
UBR3-202ENST00000392632 SPATA24Q86W54 205 aa4.64□□□□□ -1.67
UBR3-202ENST00000392632 GCOM1H8Y6P7 765 aaPredicted RBP4.63□□□□□ -1.67
UBR3-202ENST00000392632 MYZAPP0CAP1 466 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 CCDC192P0DO97 292 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 RFC4P35249 363 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 IFIT5Q13325 482 aaKnown RBP4.63□□□□□ -1.67
UBR3-202ENST00000392632 SMC1AQ14683 1233 aaKnown RBP4.63□□□□□ -1.67
UBR3-202ENST00000392632 ERMNQ8TAM6 284 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 NAPBQ9H115 298 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 TTC12Q9H892 705 aaPredicted RBP4.63□□□□□ -1.67
UBR3-202ENST00000392632 ATAD2Q6PL18 1390 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 USP47Q96K76 1375 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 CCDC194A0A1B0GVG4 234 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 CASTP20810 708 aaKnown RBP4.63□□□□□ -1.67
UBR3-202ENST00000392632 PRKAR2BP31323 418 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 WDR33Q9C0J8 1336 aaKnown RBP4.63□□□□□ -1.67
UBR3-202ENST00000392632 PLEKHH2Q8IVE3 1493 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 CCDC66A2RUB6 948 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 UBAP1LF5GYI3 381 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 NEK4P51957 841 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 MSANTD4Q8NCY6 345 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 IL27Q8NEV9 243 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 ZNF622Q969S3 477 aaKnown RBP eCLIP4.63□□□□□ -1.671e-6■■□□□ 11.7
UBR3-202ENST00000392632 CABP2Q9NPB3 220 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.63□□□□□ -1.67
UBR3-202ENST00000392632 V9GYY5 206 aaPredicted RBP4.63□□□□□ -1.67
UBR3-202ENST00000392632 BTBD11A6QL63 1104 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 ADAMTS2O95450 1211 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 TNNI2P48788 182 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 PDE4BQ07343 736 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 SULT6B1Q6IMI4 303 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 CACNA2D4Q7Z3S7 1137 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 KIAA1328Q86T90 577 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 C22orf23Q9BZE7 217 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 IMPG2Q9BZV3 1241 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 CCDC61Q9Y6R9 512 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 CNTLNQ9NXG0 1405 aa4.63□□□□□ -1.67
UBR3-202ENST00000392632 FSD2A1L4K1 749 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 SLC4A2P04920 1241 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 MCM3P25205 808 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 RRP1P56182 461 aaKnown RBP4.62□□□□□ -1.67
UBR3-202ENST00000392632 CCDC148Q8NFR7 591 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 RTEL1-TNFRSF6BF6WH68 1400 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 GRM1Q13255 1194 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 TTF1Q15361 905 aaPredicted RBP4.62□□□□□ -1.67
UBR3-202ENST00000392632 ARHGAP29Q52LW3 1261 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 CALML4Q96GE6 196 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 RSPH6AQ9H0K4 717 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 TCP11L1Q9NUJ3 509 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 NOD1Q9Y239 953 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 LRRFIP2Q9Y608 721 aaKnown RBP4.62□□□□□ -1.67
UBR3-202ENST00000392632 UQCRHLA0A096LP55 91 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 KIF2AO00139 706 aaPredicted RBP4.62□□□□□ -1.67
UBR3-202ENST00000392632 NDC80O14777 642 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 USO1O60763 962 aaKnown RBP4.62□□□□□ -1.67
UBR3-202ENST00000392632 NFE2L2Q16236 605 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 SKIDA1Q1XH10 827 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 CCDC83Q8IWF9 413 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 PRAM1Q96QH2 718 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 EYA3Q99504 573 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 TRMT112Q9UI30 125 aaKnown RBP4.62□□□□□ -1.67
UBR3-202ENST00000392632 NBPF7P0C2Y1 421 aaPredicted RBP4.62□□□□□ -1.67
UBR3-202ENST00000392632 MYL6BP14649 208 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 PAFAH1B1P43034 410 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 GNAQP50148 359 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 ZC3H6P61129 1189 aaKnown RBP4.62□□□□□ -1.67
UBR3-202ENST00000392632 DYDC1Q8WWB3 177 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 CFAP57Q96MR6 1250 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 HAUS2Q9NVX0 235 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 FHOD3Q2V2M9 1422 aa4.62□□□□□ -1.67
UBR3-202ENST00000392632 UQCRHP07919 91 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 PRKCSHP14314 528 aaPredicted RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 PDE4AP27815 886 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 PDE6BP35913 854 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 CBX1P83916 185 aa4.61□□□□□ -1.67
UBR3-202ENST00000392632 MAP2K1Q02750 393 aaPredicted RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 LARP1BQ659C4 914 aaKnown RBP4.61□□□□□ -1.67
UBR3-202ENST00000392632 CATIPQ7Z7H3 387 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms