RNA–Protein interactions for RNA: ENST00000391918.6

CALM3-202, Transcript of calmodulin 3, humanhuman

TSL 2 BASIC

Gene CALM3, Length 702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-202ENST00000391918 IL16Q14005 1332 aa25.85■■□□□ 1.73
CALM3-202ENST00000391918 GOLGA2Q08379 1002 aa25.84■■□□□ 1.73
CALM3-202ENST00000391918 SIPA1L3O60292 1781 aaPredicted RBP25.84■■□□□ 1.73
CALM3-202ENST00000391918 BTBD11A6QL63 1104 aa25.83■■□□□ 1.73
CALM3-202ENST00000391918 GNAI1P63096 354 aa25.83■■□□□ 1.73
CALM3-202ENST00000391918 IFT57Q9NWB7 429 aa25.83■■□□□ 1.73
CALM3-202ENST00000391918 SBF2Q86WG5 1849 aa25.83■■□□□ 1.73
CALM3-202ENST00000391918 KCNQ2O43526 872 aa25.82■■□□□ 1.72
CALM3-202ENST00000391918 PIGBQ92521 554 aa25.82■■□□□ 1.72
CALM3-202ENST00000391918 CFAP44Q96MT7 982 aa25.82■■□□□ 1.72
CALM3-202ENST00000391918 TSPYL4Q9UJ04 414 aa25.82■■□□□ 1.72
CALM3-202ENST00000391918 BCL11BQ9C0K0 894 aaPredicted RBP25.81■■□□□ 1.72
CALM3-202ENST00000391918 BABAM1Q9NWV8 329 aa25.81■■□□□ 1.72
CALM3-202ENST00000391918 TRIM37O94972 964 aa25.8■■□□□ 1.72
CALM3-202ENST00000391918 TTC5Q8N0Z6 440 aa25.8■■□□□ 1.72
CALM3-202ENST00000391918 MYH16Q9H6N6 1097 aa25.8■■□□□ 1.72
CALM3-202ENST00000391918 KAT6BQ8WYB5 2073 aa25.79■■□□□ 1.72
CALM3-202ENST00000391918 E9PSI1 815 aa25.79■■□□□ 1.72
CALM3-202ENST00000391918 MIS18AQ9NYP9 233 aa25.78■■□□□ 1.72
CALM3-202ENST00000391918 CHL1O00533 1208 aa25.77■■□□□ 1.72
CALM3-202ENST00000391918 BTAF1O14981 1849 aa25.77■■□□□ 1.72
CALM3-202ENST00000391918 ZNF853P0CG23 659 aa25.76■■□□□ 1.71
CALM3-202ENST00000391918 PAPPAQ13219 1627 aa25.76■■□□□ 1.71
CALM3-202ENST00000391918 KDM3BQ7LBC6 1761 aa25.75■■□□□ 1.71
CALM3-202ENST00000391918 ZNF790Q6PG37 636 aa25.75■■□□□ 1.71
CALM3-202ENST00000391918 SMARCC1Q92922 1105 aaPredicted RBP25.75■■□□□ 1.71
CALM3-202ENST00000391918 MBIPQ9NS73 344 aa25.75■■□□□ 1.71
CALM3-202ENST00000391918 SLC39A6Q13433 755 aa25.74■■□□□ 1.71
CALM3-202ENST00000391918 TSR2Q969E8 191 aaKnown RBP25.74■■□□□ 1.71
CALM3-202ENST00000391918 ASAP1Q9ULH1 1129 aa25.74■■□□□ 1.71
CALM3-202ENST00000391918 SLFN5Q08AF3 891 aa25.73■■□□□ 1.71
CALM3-202ENST00000391918 PTF1AQ7RTS3 328 aa25.73■■□□□ 1.71
CALM3-202ENST00000391918 CDCA7LQ96GN5 454 aa25.73■■□□□ 1.71
CALM3-202ENST00000391918 ATG3Q9NT62 314 aa25.73■■□□□ 1.71
CALM3-202ENST00000391918 FANCIQ9NVI1 1328 aa25.72■■□□□ 1.71
CALM3-202ENST00000391918 SF3B2Q13435 895 aaKnown RBP25.72■■□□□ 1.71
CALM3-202ENST00000391918 SPINK5Q9NQ38 1064 aaPredicted RBP25.72■■□□□ 1.71
CALM3-202ENST00000391918 PALLDQ8WX93 1383 aa25.71■■□□□ 1.71
CALM3-202ENST00000391918 FMNL2Q96PY5 1086 aa25.7■■□□□ 1.7
CALM3-202ENST00000391918 TNS1Q9HBL0 1735 aaKnown RBP25.7■■□□□ 1.7
CALM3-202ENST00000391918 KCNQ3O43525 872 aa25.69■■□□□ 1.7
CALM3-202ENST00000391918 PTCD1O75127 700 aaKnown RBP25.69■■□□□ 1.7
CALM3-202ENST00000391918 APBA3O96018 575 aa25.69■■□□□ 1.7
CALM3-202ENST00000391918 RBM42Q9BTD8 480 aaKnown RBP25.69■■□□□ 1.7
CALM3-202ENST00000391918 UBR2Q8IWV8 1755 aa25.69■■□□□ 1.7
CALM3-202ENST00000391918 EP400Q96L91 3159 aa25.68■■□□□ 1.7
CALM3-202ENST00000391918 KCPQ6ZWJ8 1503 aa25.68■■□□□ 1.7
CALM3-202ENST00000391918 EIF4A1P60842 406 aaKnown RBP25.66■■□□□ 1.7
CALM3-202ENST00000391918 CCDC125Q86Z20 511 aa25.66■■□□□ 1.7
CALM3-202ENST00000391918 ZNF496Q96IT1 587 aaPredicted RBP25.66■■□□□ 1.7
CALM3-202ENST00000391918 DUSP27Q5VZP5 1158 aa25.64■■□□□ 1.7
CALM3-202ENST00000391918 TRMT2AQ8IZ69 625 aaKnown RBP25.64■■□□□ 1.7
CALM3-202ENST00000391918 HEG1Q9ULI3 1381 aa25.64■■□□□ 1.69
CALM3-202ENST00000391918 LOC102724428A0A0B4J2F2 783 aa25.63■■□□□ 1.69
CALM3-202ENST00000391918 SIK1P57059 783 aa25.63■■□□□ 1.69
CALM3-202ENST00000391918 ILDR2Q71H61 639 aa25.63■■□□□ 1.69
CALM3-202ENST00000391918 SNRPA1P09661 255 aaKnown RBP25.62■■□□□ 1.69
CALM3-202ENST00000391918 BAG6P46379 1132 aa25.62■■□□□ 1.69
CALM3-202ENST00000391918 EXOSC9Q06265 439 aaKnown RBP25.62■■□□□ 1.69
CALM3-202ENST00000391918 VSIG10Q8N0Z9 540 aa25.62■■□□□ 1.69
CALM3-202ENST00000391918 LY75O60449 1722 aa25.61■■□□□ 1.69
CALM3-202ENST00000391918 PLSCR1O15162 318 aa25.61■■□□□ 1.69
CALM3-202ENST00000391918 CCNL1Q9UK58 526 aaPredicted RBP25.61■■□□□ 1.69
CALM3-202ENST00000391918 RGPD3A6NKT7 1758 aaPredicted RBP25.6■■□□□ 1.69
CALM3-202ENST00000391918 RGPD4Q7Z3J3 1758 aa25.6■■□□□ 1.69
CALM3-202ENST00000391918 ATP6V1AP38606 617 aa25.6■■□□□ 1.69
CALM3-202ENST00000391918 SOS1Q07889 1333 aaPredicted RBP25.6■■□□□ 1.69
CALM3-202ENST00000391918 HOXB7P09629 217 aa25.59■■□□□ 1.69
CALM3-202ENST00000391918 KRT24Q2M2I5 525 aa25.59■■□□□ 1.69
CALM3-202ENST00000391918 TWISTNBQ3B726 338 aaPredicted RBP25.59■■□□□ 1.69
CALM3-202ENST00000391918 C8orf58Q8NAV2 365 aa25.59■■□□□ 1.69
CALM3-202ENST00000391918 TEX13AQ9BXU3 409 aaPredicted RBP25.59■■□□□ 1.69
CALM3-202ENST00000391918 ZNF831Q5JPB2 1677 aa25.58■■□□□ 1.69
CALM3-202ENST00000391918 ELL2O00472 640 aaPredicted RBP25.58■■□□□ 1.69
CALM3-202ENST00000391918 GIGYF1O75420 1035 aaPredicted RBP25.58■■□□□ 1.69
CALM3-202ENST00000391918 SLC27A3Q5K4L6 730 aa25.58■■□□□ 1.69
CALM3-202ENST00000391918 CHMP4AQ9BY43 222 aa25.58■■□□□ 1.69
CALM3-202ENST00000391918 HMGB2P26583 209 aaKnown RBP25.57■■□□□ 1.68
CALM3-202ENST00000391918 C5P01031 1676 aa25.56■■□□□ 1.68
CALM3-202ENST00000391918 LAMB4A4D0S4 1761 aa25.56■■□□□ 1.68
CALM3-202ENST00000391918 CICQ96RK0 1608 aaPredicted RBP25.55■■□□□ 1.68
CALM3-202ENST00000391918 TJP1Q07157 1748 aa25.55■■□□□ 1.68
CALM3-202ENST00000391918 STARD3NLO95772 234 aa25.55■■□□□ 1.68
CALM3-202ENST00000391918 TXNRD1Q16881 649 aa25.55■■□□□ 1.68
CALM3-202ENST00000391918 DNAJC10Q8IXB1 793 aa25.55■■□□□ 1.68
CALM3-202ENST00000391918 TSPYL6Q8N831 410 aa25.55■■□□□ 1.68
CALM3-202ENST00000391918 UPF1Q92900 1129 aaKnown RBP eCLIP25.55■■□□□ 1.687e-21■■■■■ 28.6
CALM3-202ENST00000391918 SLC4A9Q96Q91 983 aa25.55■■□□□ 1.68
CALM3-202ENST00000391918 CT47B1P0C2W7 299 aaPredicted RBP25.54■■□□□ 1.68
CALM3-202ENST00000391918 EN1Q05925 392 aaPredicted RBP25.54■■□□□ 1.68
CALM3-202ENST00000391918 PRAMEF22A3QJZ6 481 aa25.53■■□□□ 1.68
CALM3-202ENST00000391918 EIF2S2P20042 333 aaKnown RBP25.53■■□□□ 1.68
CALM3-202ENST00000391918 HDGFL1Q5TGJ6 251 aa25.53■■□□□ 1.68
CALM3-202ENST00000391918 KCNQ4P56696 695 aa25.52■■□□□ 1.68
CALM3-202ENST00000391918 ITPK1Q13572 414 aa25.52■■□□□ 1.68
CALM3-202ENST00000391918 VAMP4O75379 141 aa25.51■■□□□ 1.67
CALM3-202ENST00000391918 DEFB132Q7Z7B7 95 aa25.51■■□□□ 1.67
CALM3-202ENST00000391918 USP16Q9Y5T5 823 aa25.51■■□□□ 1.67
CALM3-202ENST00000391918 EZH2Q15910 746 aaKnown RBP25.5■■□□□ 1.67
CALM3-202ENST00000391918 CCDC30Q5VVM6 783 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms