RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 PALLDQ8WX93 1383 aa26.4■■□□□ 1.82
CDPF1-202ENST00000381037 LRRC4BQ9NT99 713 aa26.4■■□□□ 1.82
CDPF1-202ENST00000381037 LY75O60449 1722 aa26.4■■□□□ 1.82
CDPF1-202ENST00000381037 CCER2I3L3R5 266 aa26.39■■□□□ 1.82
CDPF1-202ENST00000381037 MCM10Q7L590 875 aa26.39■■□□□ 1.82
CDPF1-202ENST00000381037 SMARCC1Q92922 1105 aaPredicted RBP26.39■■□□□ 1.82
CDPF1-202ENST00000381037 DCTN1Q14203 1278 aa26.39■■□□□ 1.81
CDPF1-202ENST00000381037 DLG5Q8TDM6 1919 aa26.38■■□□□ 1.81
CDPF1-202ENST00000381037 RTF1Q92541 710 aaKnown RBP26.38■■□□□ 1.81
CDPF1-202ENST00000381037 RIPK4P57078 832 aa26.37■■□□□ 1.81
CDPF1-202ENST00000381037 SLC27A3Q5K4L6 730 aa26.37■■□□□ 1.81
CDPF1-202ENST00000381037 NUP188Q5SRE5 1749 aa26.37■■□□□ 1.81
CDPF1-202ENST00000381037 MIER1Q8N108 512 aa26.36■■□□□ 1.81
CDPF1-202ENST00000381037 TEFQ10587 303 aa26.36■■□□□ 1.81
CDPF1-202ENST00000381037 RRP7AQ9Y3A4 280 aaKnown RBP26.36■■□□□ 1.81
CDPF1-202ENST00000381037 SIPA1L3O60292 1781 aaPredicted RBP26.35■■□□□ 1.81
CDPF1-202ENST00000381037 APAF1O14727 1248 aa26.34■■□□□ 1.81
CDPF1-202ENST00000381037 KCNQ4P56696 695 aa26.34■■□□□ 1.81
CDPF1-202ENST00000381037 SLC4A9Q96Q91 983 aa26.33■■□□□ 1.81
CDPF1-202ENST00000381037 TRIM35Q9UPQ4 493 aa26.33■■□□□ 1.81
CDPF1-202ENST00000381037 LOC102724428A0A0B4J2F2 783 aa26.32■■□□□ 1.8
CDPF1-202ENST00000381037 SIK1P57059 783 aa26.32■■□□□ 1.8
CDPF1-202ENST00000381037 CCNL1Q9UK58 526 aaPredicted RBP26.32■■□□□ 1.8
CDPF1-202ENST00000381037 PAPPAQ13219 1627 aa26.32■■□□□ 1.8
CDPF1-202ENST00000381037 SLC39A6Q13433 755 aa26.31■■□□□ 1.8
CDPF1-202ENST00000381037 NEUROD2Q15784 382 aa26.31■■□□□ 1.8
CDPF1-202ENST00000381037 FAM9BQ8IZU0 186 aa26.31■■□□□ 1.8
CDPF1-202ENST00000381037 THUMPD2Q9BTF0 503 aaKnown RBP26.31■■□□□ 1.8
CDPF1-202ENST00000381037 ANO8Q9HCE9 1232 aaPredicted RBP26.3■■□□□ 1.8
CDPF1-202ENST00000381037 LMOD3Q0VAK6 560 aa26.28■■□□□ 1.8
CDPF1-202ENST00000381037 TAF7Q15545 349 aaPredicted RBP26.28■■□□□ 1.8
CDPF1-202ENST00000381037 ZNF790Q6PG37 636 aa26.28■■□□□ 1.8
CDPF1-202ENST00000381037 KCPQ6ZWJ8 1503 aa26.27■■□□□ 1.8
CDPF1-202ENST00000381037 PTCD1O75127 700 aaKnown RBP26.27■■□□□ 1.8
CDPF1-202ENST00000381037 ITPK1Q13572 414 aa26.27■■□□□ 1.8
CDPF1-202ENST00000381037 ZNF831Q5JPB2 1677 aa26.27■■□□□ 1.8
CDPF1-202ENST00000381037 BTBD11A6QL63 1104 aa26.26■■□□□ 1.79
CDPF1-202ENST00000381037 ATP6V1AP38606 617 aa26.25■■□□□ 1.79
CDPF1-202ENST00000381037 NBPF14Q5TI25 921 aa26.25■■□□□ 1.79
CDPF1-202ENST00000381037 AKT1S1Q96B36 256 aa26.25■■□□□ 1.79
CDPF1-202ENST00000381037 RBM42Q9BTD8 480 aaKnown RBP26.25■■□□□ 1.79
CDPF1-202ENST00000381037 KCNQ3O43525 872 aa26.25■■□□□ 1.79
CDPF1-202ENST00000381037 NCBP3Q53F19 620 aaKnown RBP26.25■■□□□ 1.79
CDPF1-202ENST00000381037 UBR2Q8IWV8 1755 aa26.24■■□□□ 1.79
CDPF1-202ENST00000381037 SLC15A2Q16348 729 aa26.24■■□□□ 1.79
CDPF1-202ENST00000381037 ZNF827Q17R98 1081 aa26.24■■□□□ 1.79
CDPF1-202ENST00000381037 TAF1LQ8IZX4 1826 aa26.23■■□□□ 1.79
CDPF1-202ENST00000381037 LINC00116Q8NCU8 138 aa26.22■■□□□ 1.79
CDPF1-202ENST00000381037 ZNF496Q96IT1 587 aaPredicted RBP26.22■■□□□ 1.79
CDPF1-202ENST00000381037 MIS18AQ9NYP9 233 aa26.22■■□□□ 1.79
CDPF1-202ENST00000381037 C5P01031 1676 aa26.22■■□□□ 1.79
CDPF1-202ENST00000381037 R3HDM1Q15032 1099 aaKnown RBP26.21■■□□□ 1.79
CDPF1-202ENST00000381037 CCDC27Q2M243 656 aa26.21■■□□□ 1.79
CDPF1-202ENST00000381037 TTC5Q8N0Z6 440 aa26.21■■□□□ 1.79
CDPF1-202ENST00000381037 CICQ96RK0 1608 aaPredicted RBP26.21■■□□□ 1.79
CDPF1-202ENST00000381037 VSIG10Q8N0Z9 540 aa26.21■■□□□ 1.79
CDPF1-202ENST00000381037 HMGB2P26583 209 aaKnown RBP26.2■■□□□ 1.78
CDPF1-202ENST00000381037 STK32BQ9NY57 414 aa26.2■■□□□ 1.78
CDPF1-202ENST00000381037 SENP3-EIF4A1A0A087X0R7 540 aa26.19■■□□□ 1.78
CDPF1-202ENST00000381037 PSDA5PKW4 1024 aaPredicted RBP26.18■■□□□ 1.78
CDPF1-202ENST00000381037 BABAM1Q9NWV8 329 aa26.18■■□□□ 1.78
CDPF1-202ENST00000381037 HEG1Q9ULI3 1381 aa26.18■■□□□ 1.78
CDPF1-202ENST00000381037 C4BP0C0L5 1744 aa26.17■■□□□ 1.78
CDPF1-202ENST00000381037 TJP1Q07157 1748 aa26.17■■□□□ 1.78
CDPF1-202ENST00000381037 FMNL2Q96PY5 1086 aa26.17■■□□□ 1.78
CDPF1-202ENST00000381037 KDM3BQ7LBC6 1761 aa26.16■■□□□ 1.78
CDPF1-202ENST00000381037 COL5A3P25940 1745 aaPredicted RBP26.16■■□□□ 1.78
CDPF1-202ENST00000381037 CHL1O00533 1208 aa26.16■■□□□ 1.78
CDPF1-202ENST00000381037 WWC1Q8IX03 1113 aa26.16■■□□□ 1.78
CDPF1-202ENST00000381037 DNAJC10Q8IXB1 793 aa26.16■■□□□ 1.78
CDPF1-202ENST00000381037 RC3H1Q5TC82 1133 aaKnown RBP26.14■■□□□ 1.78
CDPF1-202ENST00000381037 SRCAPQ6ZRS2 3230 aa26.14■■□□□ 1.78
CDPF1-202ENST00000381037 ZNF853P0CG23 659 aa26.14■■□□□ 1.77
CDPF1-202ENST00000381037 AMIGO3Q86WK7 504 aa26.14■■□□□ 1.77
CDPF1-202ENST00000381037 CNTNAP4Q9C0A0 1308 aa26.13■■□□□ 1.77
CDPF1-202ENST00000381037 CYP19A1P11511 503 aaPredicted RBP26.13■■□□□ 1.77
CDPF1-202ENST00000381037 EIF4A1P60842 406 aaKnown RBP26.13■■□□□ 1.77
CDPF1-202ENST00000381037 CFAP44Q96MT7 982 aa26.13■■□□□ 1.77
CDPF1-202ENST00000381037 PDGFDQ9GZP0 370 aaPredicted RBP26.13■■□□□ 1.77
CDPF1-202ENST00000381037 TSPYL4Q9UJ04 414 aa26.13■■□□□ 1.77
CDPF1-202ENST00000381037 NGEFQ8N5V2 710 aa26.12■■□□□ 1.77
CDPF1-202ENST00000381037 TFCP2L1Q9NZI6 479 aa26.12■■□□□ 1.77
CDPF1-202ENST00000381037 PNPLA7Q6ZV29 1317 aa26.12■■□□□ 1.77
CDPF1-202ENST00000381037 MYH14Q7Z406 1995 aaKnown RBP26.11■■□□□ 1.77
CDPF1-202ENST00000381037 CRKLP46109 303 aaKnown RBP26.1■■□□□ 1.77
CDPF1-202ENST00000381037 CALD1Q05682 793 aaKnown RBP26.1■■□□□ 1.77
CDPF1-202ENST00000381037 INTS5Q6P9B9 1019 aaKnown RBP26.1■■□□□ 1.77
CDPF1-202ENST00000381037 QSER1Q2KHR3 1735 aa26.1■■□□□ 1.77
CDPF1-202ENST00000381037 PRAMEF22A3QJZ6 481 aa26.1■■□□□ 1.77
CDPF1-202ENST00000381037 AK7Q96M32 723 aa26.1■■□□□ 1.77
CDPF1-202ENST00000381037 TEX13AQ9BXU3 409 aaPredicted RBP26.1■■□□□ 1.77
CDPF1-202ENST00000381037 IFT57Q9NWB7 429 aa26.1■■□□□ 1.77
CDPF1-202ENST00000381037 TUBGCP6Q96RT7 1819 aa26.09■■□□□ 1.77
CDPF1-202ENST00000381037 SNRPA1P09661 255 aaKnown RBP26.09■■□□□ 1.77
CDPF1-202ENST00000381037 SALL2Q9Y467 1007 aaPredicted RBP26.08■■□□□ 1.77
CDPF1-202ENST00000381037 UBR3Q6ZT12 1888 aa26.08■■□□□ 1.77
CDPF1-202ENST00000381037 CASZ1Q86V15 1759 aa26.08■■□□□ 1.77
CDPF1-202ENST00000381037 GNPATO15228 680 aa26.07■■□□□ 1.76
CDPF1-202ENST00000381037 GIGYF1O75420 1035 aaPredicted RBP26.07■■□□□ 1.76
CDPF1-202ENST00000381037 SMIM5Q71RC9 77 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms