RNA–Protein interactions for RNA: ENST00000379613.7

TFAP2A-203, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TFAP2A, Length 3,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-203ENST00000379613 ZSCAN23Q3MJ62 389 aa13.26□□□□□ -0.29
TFAP2A-203ENST00000379613 MX1P20591 662 aa13.25□□□□□ -0.29
TFAP2A-203ENST00000379613 RGS12O14924 1447 aa13.25□□□□□ -0.29
TFAP2A-203ENST00000379613 ANP32BQ92688 251 aaKnown RBP13.25□□□□□ -0.29
TFAP2A-203ENST00000379613 SETD1BQ9UPS6 1966 aaKnown RBP13.25□□□□□ -0.29
TFAP2A-203ENST00000379613 AATKQ6ZMQ8 1374 aa13.25□□□□□ -0.29
TFAP2A-203ENST00000379613 CLCN1P35523 988 aa13.24□□□□□ -0.29
TFAP2A-203ENST00000379613 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
TFAP2A-203ENST00000379613 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
TFAP2A-203ENST00000379613 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
TFAP2A-203ENST00000379613 CDK12Q9NYV4 1490 aaPredicted RBP13.24□□□□□ -0.29
TFAP2A-203ENST00000379613 OS9Q13438 667 aaPredicted RBP13.24□□□□□ -0.29
TFAP2A-203ENST00000379613 LRRC59Q96AG4 307 aaKnown RBP13.24□□□□□ -0.29
TFAP2A-203ENST00000379613 NBPF7P0C2Y1 421 aaPredicted RBP13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 UBTFL1P0CB47 393 aaPredicted RBP13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 NUCB2P80303 420 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 KLHL40Q2TBA0 621 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 PTPRCP08575 1304 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 PPP1R42Q7Z4L9 355 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 ESYT1Q9BSJ8 1104 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 USP44Q9H0E7 712 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 TMEM63CQ9P1W3 806 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 KNDC1Q76NI1 1749 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 PLCB2Q00722 1185 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 EID1Q9Y6B2 187 aa13.23□□□□□ -0.29
TFAP2A-203ENST00000379613 SRGAP3O43295 1099 aa13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 CWC27Q6UX04 472 aaKnown RBP13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 KIF20BQ96Q89 1820 aa13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 CHMLP26374 656 aa13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 TNRQ92752 1358 aa13.22□□□□□ -0.29
TFAP2A-203ENST00000379613 GADD45BO75293 160 aaPredicted RBP13.21□□□□□ -0.29
TFAP2A-203ENST00000379613 HAP1P54257 671 aaPredicted RBP13.21□□□□□ -0.29
TFAP2A-203ENST00000379613 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.29
TFAP2A-203ENST00000379613 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.29
TFAP2A-203ENST00000379613 PI4KAP2A4QPH2 592 aa13.21□□□□□ -0.3
TFAP2A-203ENST00000379613 KCNA6P17658 529 aa13.21□□□□□ -0.3
TFAP2A-203ENST00000379613 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.3
TFAP2A-203ENST00000379613 PI4KAP1Q8N8J0 262 aa13.21□□□□□ -0.3
TFAP2A-203ENST00000379613 PA2G4Q9UQ80 394 aaKnown RBP13.21□□□□□ -0.3
TFAP2A-203ENST00000379613 CRB1P82279 1406 aa13.21□□□□□ -0.3
TFAP2A-203ENST00000379613 PLEKHG3A1L390 1219 aa13.2□□□□□ -0.3
TFAP2A-203ENST00000379613 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
TFAP2A-203ENST00000379613 CHPF2Q9P2E5 772 aa13.2□□□□□ -0.3
TFAP2A-203ENST00000379613 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
TFAP2A-203ENST00000379613 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
TFAP2A-203ENST00000379613 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
TFAP2A-203ENST00000379613 HOXC9P31274 260 aa13.19□□□□□ -0.3
TFAP2A-203ENST00000379613 KIF13AQ9H1H9 1805 aa13.19□□□□□ -0.3
TFAP2A-203ENST00000379613 GNAI3P08754 354 aa13.19□□□□□ -0.3
TFAP2A-203ENST00000379613 TCEANC2Q96MN5 208 aa13.19□□□□□ -0.3
TFAP2A-203ENST00000379613 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 MSNP26038 577 aaKnown RBP13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 USP6P35125 1406 aa13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 ZNF830Q96NB3 372 aaPredicted RBP13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 NBPF6Q5VWK0 638 aa13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 NBPF4Q96M43 638 aa13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 SIL1Q9H173 461 aa13.18□□□□□ -0.3
TFAP2A-203ENST00000379613 CYP2E1P05181 493 aaPredicted RBP13.17□□□□□ -0.3
TFAP2A-203ENST00000379613 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
TFAP2A-203ENST00000379613 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
TFAP2A-203ENST00000379613 ANKRD26Q9UPS8 1709 aa13.17□□□□□ -0.3
TFAP2A-203ENST00000379613 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
TFAP2A-203ENST00000379613 KIAA1211Q6ZU35 1233 aa13.17□□□□□ -0.3
TFAP2A-203ENST00000379613 MCCP23508 829 aa13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 ESCO1Q5FWF5 840 aa13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 RHPN1Q8TCX5 695 aa13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
TFAP2A-203ENST00000379613 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
TFAP2A-203ENST00000379613 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
TFAP2A-203ENST00000379613 FLT4P35916 1363 aa13.15□□□□□ -0.3
TFAP2A-203ENST00000379613 CCDC173Q0VFZ6 552 aa13.15□□□□□ -0.3
TFAP2A-203ENST00000379613 FIBPO43427 364 aa13.15□□□□□ -0.31
TFAP2A-203ENST00000379613 TEFQ10587 303 aa13.15□□□□□ -0.31
TFAP2A-203ENST00000379613 HSP90AA2PQ14568 343 aaPredicted RBP13.15□□□□□ -0.31
TFAP2A-203ENST00000379613 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.31
TFAP2A-203ENST00000379613 NDUFB9Q9Y6M9 179 aa13.15□□□□□ -0.31
TFAP2A-203ENST00000379613 PPFIA3O75145 1194 aa13.14□□□□□ -0.31
TFAP2A-203ENST00000379613 USP48Q86UV5 1035 aa13.14□□□□□ -0.31
TFAP2A-203ENST00000379613 CCDC8Q9H0W5 538 aaPredicted RBP13.14□□□□□ -0.31
TFAP2A-203ENST00000379613 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
TFAP2A-203ENST00000379613 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
TFAP2A-203ENST00000379613 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.14□□□□□ -0.31
TFAP2A-203ENST00000379613 ADAMTS13Q76LX8 1427 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms