RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ASAP1Q9ULH1 1129 aa24.73■■□□□ 1.55
SSU72-203ENST00000378725 RGPD3A6NKT7 1758 aaPredicted RBP24.72■■□□□ 1.55
SSU72-203ENST00000378725 RGPD4Q7Z3J3 1758 aa24.72■■□□□ 1.55
SSU72-203ENST00000378725 KAT6BQ8WYB5 2073 aa24.71■■□□□ 1.55
SSU72-203ENST00000378725 APAF1O14727 1248 aa24.71■■□□□ 1.55
SSU72-203ENST00000378725 DCTN1Q14203 1278 aa24.71■■□□□ 1.55
SSU72-203ENST00000378725 PALLDQ8WX93 1383 aa24.7■■□□□ 1.55
SSU72-203ENST00000378725 TEFQ10587 303 aa24.7■■□□□ 1.54
SSU72-203ENST00000378725 SLC27A3Q5K4L6 730 aa24.7■■□□□ 1.54
SSU72-203ENST00000378725 FAM9BQ8IZU0 186 aa24.7■■□□□ 1.54
SSU72-203ENST00000378725 RRP7AQ9Y3A4 280 aaKnown RBP24.7■■□□□ 1.54
SSU72-203ENST00000378725 LMOD3Q0VAK6 560 aa24.69■■□□□ 1.54
SSU72-203ENST00000378725 TRIM35Q9UPQ4 493 aa24.68■■□□□ 1.54
SSU72-203ENST00000378725 NEUROD2Q15784 382 aa24.67■■□□□ 1.54
SSU72-203ENST00000378725 LRRC4BQ9NT99 713 aa24.67■■□□□ 1.54
SSU72-203ENST00000378725 NCBP3Q53F19 620 aaKnown RBP24.65■■□□□ 1.54
SSU72-203ENST00000378725 RREB1Q92766 1687 aa24.65■■□□□ 1.54
SSU72-203ENST00000378725 DLG5Q8TDM6 1919 aa24.65■■□□□ 1.54
SSU72-203ENST00000378725 LY75O60449 1722 aa24.64■■□□□ 1.54
SSU72-203ENST00000378725 LOC102724428A0A0B4J2F2 783 aa24.64■■□□□ 1.54
SSU72-203ENST00000378725 SIK1P57059 783 aa24.64■■□□□ 1.54
SSU72-203ENST00000378725 SLC39A6Q13433 755 aa24.64■■□□□ 1.54
SSU72-203ENST00000378725 TAF7Q15545 349 aaPredicted RBP24.64■■□□□ 1.54
SSU72-203ENST00000378725 THUMPD2Q9BTF0 503 aaKnown RBP24.64■■□□□ 1.54
SSU72-203ENST00000378725 CCNL1Q9UK58 526 aaPredicted RBP24.64■■□□□ 1.54
SSU72-203ENST00000378725 BTBD11A6QL63 1104 aa24.63■■□□□ 1.53
SSU72-203ENST00000378725 VIRMAQ69YN4 1812 aaKnown RBP24.63■■□□□ 1.53
SSU72-203ENST00000378725 KCNQ4P56696 695 aa24.62■■□□□ 1.53
SSU72-203ENST00000378725 HMGB2P26583 209 aaKnown RBP24.61■■□□□ 1.53
SSU72-203ENST00000378725 ZNF790Q6PG37 636 aa24.61■■□□□ 1.53
SSU72-203ENST00000378725 SLC4A9Q96Q91 983 aa24.61■■□□□ 1.53
SSU72-203ENST00000378725 SIPA1L3O60292 1781 aaPredicted RBP24.61■■□□□ 1.53
SSU72-203ENST00000378725 CCDC27Q2M243 656 aa24.6■■□□□ 1.53
SSU72-203ENST00000378725 NBPF14Q5TI25 921 aa24.6■■□□□ 1.53
SSU72-203ENST00000378725 RBM42Q9BTD8 480 aaKnown RBP24.6■■□□□ 1.53
SSU72-203ENST00000378725 NUP188Q5SRE5 1749 aa24.59■■□□□ 1.53
SSU72-203ENST00000378725 PTCD1O75127 700 aaKnown RBP24.59■■□□□ 1.53
SSU72-203ENST00000378725 PAPPAQ13219 1627 aa24.58■■□□□ 1.53
SSU72-203ENST00000378725 ATP6V1AP38606 617 aa24.58■■□□□ 1.53
SSU72-203ENST00000378725 TTC5Q8N0Z6 440 aa24.58■■□□□ 1.53
SSU72-203ENST00000378725 BABAM1Q9NWV8 329 aa24.58■■□□□ 1.53
SSU72-203ENST00000378725 KCNQ3O43525 872 aa24.57■■□□□ 1.52
SSU72-203ENST00000378725 ITPK1Q13572 414 aa24.57■■□□□ 1.52
SSU72-203ENST00000378725 KCPQ6ZWJ8 1503 aa24.56■■□□□ 1.52
SSU72-203ENST00000378725 VSIG10Q8N0Z9 540 aa24.56■■□□□ 1.52
SSU72-203ENST00000378725 NGEFQ8N5V2 710 aa24.56■■□□□ 1.52
SSU72-203ENST00000378725 AKT1S1Q96B36 256 aa24.56■■□□□ 1.52
SSU72-203ENST00000378725 ANO8Q9HCE9 1232 aaPredicted RBP24.56■■□□□ 1.52
SSU72-203ENST00000378725 MIS18AQ9NYP9 233 aa24.56■■□□□ 1.52
SSU72-203ENST00000378725 ZNF496Q96IT1 587 aaPredicted RBP24.55■■□□□ 1.52
SSU72-203ENST00000378725 ZNF831Q5JPB2 1677 aa24.55■■□□□ 1.52
SSU72-203ENST00000378725 SLC15A2Q16348 729 aa24.54■■□□□ 1.52
SSU72-203ENST00000378725 WWC1Q8IX03 1113 aa24.54■■□□□ 1.52
SSU72-203ENST00000378725 SENP3-EIF4A1A0A087X0R7 540 aa24.53■■□□□ 1.52
SSU72-203ENST00000378725 CHL1O00533 1208 aa24.53■■□□□ 1.52
SSU72-203ENST00000378725 LINC00116Q8NCU8 138 aa24.53■■□□□ 1.52
SSU72-203ENST00000378725 FMNL2Q96PY5 1086 aa24.53■■□□□ 1.52
SSU72-203ENST00000378725 STK32BQ9NY57 414 aa24.53■■□□□ 1.52
SSU72-203ENST00000378725 CALD1Q05682 793 aaKnown RBP24.52■■□□□ 1.52
SSU72-203ENST00000378725 ZNF827Q17R98 1081 aa24.52■■□□□ 1.52
SSU72-203ENST00000378725 ZNF853P0CG23 659 aa24.51■■□□□ 1.51
SSU72-203ENST00000378725 CFAP44Q96MT7 982 aa24.51■■□□□ 1.51
SSU72-203ENST00000378725 UBR2Q8IWV8 1755 aa24.51■■□□□ 1.51
SSU72-203ENST00000378725 HEG1Q9ULI3 1381 aa24.51■■□□□ 1.51
SSU72-203ENST00000378725 TSPYL4Q9UJ04 414 aa24.5■■□□□ 1.51
SSU72-203ENST00000378725 EIF4A1P60842 406 aaKnown RBP24.49■■□□□ 1.51
SSU72-203ENST00000378725 R3HDM1Q15032 1099 aaKnown RBP24.49■■□□□ 1.51
SSU72-203ENST00000378725 RC3H1Q5TC82 1133 aaKnown RBP24.49■■□□□ 1.51
SSU72-203ENST00000378725 DNAJC10Q8IXB1 793 aa24.49■■□□□ 1.51
SSU72-203ENST00000378725 CICQ96RK0 1608 aaPredicted RBP24.49■■□□□ 1.51
SSU72-203ENST00000378725 C5P01031 1676 aa24.48■■□□□ 1.51
SSU72-203ENST00000378725 TEX13AQ9BXU3 409 aaPredicted RBP24.48■■□□□ 1.51
SSU72-203ENST00000378725 IFT57Q9NWB7 429 aa24.48■■□□□ 1.51
SSU72-203ENST00000378725 SALL2Q9Y467 1007 aaPredicted RBP24.48■■□□□ 1.51
SSU72-203ENST00000378725 CYP19A1P11511 503 aaPredicted RBP24.47■■□□□ 1.51
SSU72-203ENST00000378725 WDR63Q8IWG1 891 aa24.47■■□□□ 1.51
SSU72-203ENST00000378725 TAF1LQ8IZX4 1826 aa24.47■■□□□ 1.51
SSU72-203ENST00000378725 IL16Q14005 1332 aa24.46■■□□□ 1.51
SSU72-203ENST00000378725 CNTNAP4Q9C0A0 1308 aa24.46■■□□□ 1.51
SSU72-203ENST00000378725 SNRPA1P09661 255 aaKnown RBP24.46■■□□□ 1.51
SSU72-203ENST00000378725 LAS1LQ9Y4W2 734 aaKnown RBP24.46■■□□□ 1.51
SSU72-203ENST00000378725 KDM3BQ7LBC6 1761 aa24.46■■□□□ 1.51
SSU72-203ENST00000378725 C4BP0C0L5 1744 aa24.45■■□□□ 1.5
SSU72-203ENST00000378725 PSDA5PKW4 1024 aaPredicted RBP24.45■■□□□ 1.5
SSU72-203ENST00000378725 GNAI1P63096 354 aa24.45■■□□□ 1.5
SSU72-203ENST00000378725 TFCP2L1Q9NZI6 479 aa24.45■■□□□ 1.5
SSU72-203ENST00000378725 TJP1Q07157 1748 aa24.44■■□□□ 1.5
SSU72-203ENST00000378725 GIGYF1O75420 1035 aaPredicted RBP24.44■■□□□ 1.5
SSU72-203ENST00000378725 CRKLP46109 303 aaKnown RBP24.44■■□□□ 1.5
SSU72-203ENST00000378725 AK7Q96M32 723 aa24.44■■□□□ 1.5
SSU72-203ENST00000378725 ZNF521Q96K83 1311 aa24.43■■□□□ 1.5
SSU72-203ENST00000378725 STARD3NLO95772 234 aa24.43■■□□□ 1.5
SSU72-203ENST00000378725 INTS5Q6P9B9 1019 aaKnown RBP24.43■■□□□ 1.5
SSU72-203ENST00000378725 MBIPQ9NS73 344 aa24.43■■□□□ 1.5
SSU72-203ENST00000378725 USP16Q9Y5T5 823 aa24.43■■□□□ 1.5
SSU72-203ENST00000378725 PRAMEF22A3QJZ6 481 aa24.42■■□□□ 1.5
SSU72-203ENST00000378725 COL5A3P25940 1745 aaPredicted RBP24.41■■□□□ 1.5
SSU72-203ENST00000378725 PNPLA7Q6ZV29 1317 aa24.41■■□□□ 1.5
SSU72-203ENST00000378725 RPS6KA4O75676 772 aa24.41■■□□□ 1.5
SSU72-203ENST00000378725 AMIGO3Q86WK7 504 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms