RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 FLIIQ13045 1269 aa24.07■■□□□ 1.44
SHROOM1-202ENST00000378676 MAP3K5Q99683 1374 aa24.07■■□□□ 1.44
SHROOM1-202ENST00000378676 HTATSF1O43719 755 aaKnown RBP24.07■■□□□ 1.44
SHROOM1-202ENST00000378676 EXOC6BQ9Y2D4 811 aa24.07■■□□□ 1.44
SHROOM1-202ENST00000378676 GNAI2P04899 355 aa24.06■■□□□ 1.44
SHROOM1-202ENST00000378676 LTV1Q96GA3 475 aaPredicted RBP24.06■■□□□ 1.44
SHROOM1-202ENST00000378676 PDE1AP54750 535 aa24.05■■□□□ 1.44
SHROOM1-202ENST00000378676 FKBP5Q13451 457 aaPredicted RBP24.05■■□□□ 1.44
SHROOM1-202ENST00000378676 IL17REQ8NFR9 667 aa24.05■■□□□ 1.44
SHROOM1-202ENST00000378676 OSBPL3Q9H4L5 887 aa24.05■■□□□ 1.44
SHROOM1-202ENST00000378676 RGPD2P0DJD1 1756 aa24.04■■□□□ 1.44
SHROOM1-202ENST00000378676 CASC1Q6TDU7 716 aa24.04■■□□□ 1.44
SHROOM1-202ENST00000378676 SALL3Q9BXA9 1300 aa24.04■■□□□ 1.44
SHROOM1-202ENST00000378676 CCDC30Q5VVM6 783 aa24.03■■□□□ 1.44
SHROOM1-202ENST00000378676 TSHZ3Q63HK5 1081 aa24.03■■□□□ 1.44
SHROOM1-202ENST00000378676 USHBP1Q8N6Y0 703 aa24.03■■□□□ 1.44
SHROOM1-202ENST00000378676 ZNF142P52746 1687 aaPredicted RBP24.02■■□□□ 1.44
SHROOM1-202ENST00000378676 PNMA6EA0A0J9YXQ4 647 aa24.02■■□□□ 1.44
SHROOM1-202ENST00000378676 ABTB2Q8N961 1025 aa24.02■■□□□ 1.44
SHROOM1-202ENST00000378676 RRAGDQ9NQL2 400 aaPredicted RBP24.02■■□□□ 1.44
SHROOM1-202ENST00000378676 CHD2O14647 1828 aaKnown RBP24.01■■□□□ 1.43
SHROOM1-202ENST00000378676 PXDNLA1KZ92 1463 aa24.01■■□□□ 1.43
SHROOM1-202ENST00000378676 MRE11P49959 708 aa24.01■■□□□ 1.43
SHROOM1-202ENST00000378676 GRPEL1Q9HAV7 217 aa24■■□□□ 1.43
SHROOM1-202ENST00000378676 KDM3BQ7LBC6 1761 aa24■■□□□ 1.43
SHROOM1-202ENST00000378676 ERC2O15083 957 aa24■■□□□ 1.43
SHROOM1-202ENST00000378676 REC8O95072 547 aa23.99■■□□□ 1.43
SHROOM1-202ENST00000378676 GNAI3P08754 354 aa23.99■■□□□ 1.43
SHROOM1-202ENST00000378676 CLEC17AQ6ZS10 378 aa23.99■■□□□ 1.43
SHROOM1-202ENST00000378676 GAS2L3Q86XJ1 694 aa23.99■■□□□ 1.43
SHROOM1-202ENST00000378676 NFAT5O94916 1531 aa23.98■■□□□ 1.43
SHROOM1-202ENST00000378676 BAG4O95429 457 aaKnown RBP23.98■■□□□ 1.43
SHROOM1-202ENST00000378676 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
SHROOM1-202ENST00000378676 IBTKQ9P2D0 1353 aaPredicted RBP23.98■■□□□ 1.43
SHROOM1-202ENST00000378676 ATP8B2P98198 1209 aa23.98■■□□□ 1.43
SHROOM1-202ENST00000378676 TAF7Q15545 349 aaPredicted RBP23.98■■□□□ 1.43
SHROOM1-202ENST00000378676 LRRCC1Q9C099 1032 aa23.98■■□□□ 1.43
SHROOM1-202ENST00000378676 LRRFIP2Q9Y608 721 aaKnown RBP23.98■■□□□ 1.43
SHROOM1-202ENST00000378676 SKOR2Q2VWA4 1001 aaPredicted RBP23.97■■□□□ 1.43
SHROOM1-202ENST00000378676 C14orf37Q86TY3 774 aa23.97■■□□□ 1.43
SHROOM1-202ENST00000378676 PTMSP20962 102 aa23.96■■□□□ 1.43
SHROOM1-202ENST00000378676 PKP1Q13835 747 aa23.96■■□□□ 1.43
SHROOM1-202ENST00000378676 CYP2E1P05181 493 aaPredicted RBP23.95■■□□□ 1.43
SHROOM1-202ENST00000378676 MX1P20591 662 aa23.95■■□□□ 1.42
SHROOM1-202ENST00000378676 SOS1Q07889 1333 aaPredicted RBP23.94■■□□□ 1.42
SHROOM1-202ENST00000378676 ST18O60284 1047 aa23.94■■□□□ 1.42
SHROOM1-202ENST00000378676 ZGPATQ8N5A5 531 aaKnown RBP23.94■■□□□ 1.42
SHROOM1-202ENST00000378676 PHAXQ9H814 394 aaKnown RBP23.94■■□□□ 1.42
SHROOM1-202ENST00000378676 LMO7Q8WWI1 1683 aa23.94■■□□□ 1.42
SHROOM1-202ENST00000378676 USP44Q9H0E7 712 aa23.94■■□□□ 1.42
SHROOM1-202ENST00000378676 ISY1Q9ULR0 285 aaKnown RBP23.94■■□□□ 1.42
SHROOM1-202ENST00000378676 HDGFL1Q5TGJ6 251 aa23.93■■□□□ 1.42
SHROOM1-202ENST00000378676 BABAM1Q9NWV8 329 aa23.93■■□□□ 1.42
SHROOM1-202ENST00000378676 PHF8Q9UPP1 1060 aa23.93■■□□□ 1.42
SHROOM1-202ENST00000378676 CEMIPQ8WUJ3 1361 aa23.92■■□□□ 1.42
SHROOM1-202ENST00000378676 ESYT1Q9BSJ8 1104 aa23.92■■□□□ 1.42
SHROOM1-202ENST00000378676 ANKLE2Q86XL3 938 aa23.92■■□□□ 1.42
SHROOM1-202ENST00000378676 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
SHROOM1-202ENST00000378676 NUCB2P80303 420 aa23.91■■□□□ 1.42
SHROOM1-202ENST00000378676 GOLGA6L22H0YM25 854 aa23.91■■□□□ 1.42
SHROOM1-202ENST00000378676 PHRF1Q9P1Y6 1649 aaKnown RBP23.9■■□□□ 1.42
SHROOM1-202ENST00000378676 UBTFL1P0CB47 393 aaPredicted RBP23.89■■□□□ 1.42
SHROOM1-202ENST00000378676 NBPF6Q5VWK0 638 aa23.89■■□□□ 1.42
SHROOM1-202ENST00000378676 NBPF4Q96M43 638 aa23.89■■□□□ 1.42
SHROOM1-202ENST00000378676 MCTP1Q6DN14 999 aa23.89■■□□□ 1.41
SHROOM1-202ENST00000378676 UNC5CLQ8IV45 518 aa23.89■■□□□ 1.41
SHROOM1-202ENST00000378676 IP6K1Q92551 441 aa23.89■■□□□ 1.41
SHROOM1-202ENST00000378676 RILPL2Q969X0 211 aa23.88■■□□□ 1.41
SHROOM1-202ENST00000378676 STAP2Q9UGK3 403 aa23.88■■□□□ 1.41
SHROOM1-202ENST00000378676 PALD1Q9ULE6 856 aa23.88■■□□□ 1.41
SHROOM1-202ENST00000378676 CHMLP26374 656 aa23.88■■□□□ 1.41
SHROOM1-202ENST00000378676 KLHL40Q2TBA0 621 aa23.88■■□□□ 1.41
SHROOM1-202ENST00000378676 LGR6Q9HBX8 967 aa23.88■■□□□ 1.41
SHROOM1-202ENST00000378676 TRIM6-TRIM34B2RNG4 842 aa23.87■■□□□ 1.41
SHROOM1-202ENST00000378676 ZDHHC9Q9Y397 364 aa23.87■■□□□ 1.41
SHROOM1-202ENST00000378676 DDX49Q9Y6V7 483 aaKnown RBP23.87■■□□□ 1.41
SHROOM1-202ENST00000378676 CWC22Q9HCG8 908 aaKnown RBP23.87■■□□□ 1.41
SHROOM1-202ENST00000378676 IL1RAPL2Q9NP60 686 aa23.87■■□□□ 1.41
SHROOM1-202ENST00000378676 EIF2S2P20042 333 aaKnown RBP23.86■■□□□ 1.41
SHROOM1-202ENST00000378676 SSH3Q8TE77 659 aa23.86■■□□□ 1.41
SHROOM1-202ENST00000378676 EIF4A1P60842 406 aaKnown RBP23.86■■□□□ 1.41
SHROOM1-202ENST00000378676 ZBTB7CA1YPR0 619 aa23.85■■□□□ 1.41
SHROOM1-202ENST00000378676 KCNQ3O43525 872 aa23.85■■□□□ 1.41
SHROOM1-202ENST00000378676 NEK4P51957 841 aa23.85■■□□□ 1.41
SHROOM1-202ENST00000378676 LMBRD1Q9NUN5 540 aa23.84■■□□□ 1.41
SHROOM1-202ENST00000378676 CHPF2Q9P2E5 772 aa23.84■■□□□ 1.41
SHROOM1-202ENST00000378676 PPP1R42Q7Z4L9 355 aa23.84■■□□□ 1.41
SHROOM1-202ENST00000378676 NUTM1Q86Y26 1132 aa23.84■■□□□ 1.41
SHROOM1-202ENST00000378676 SRCIN1Q9C0H9 1055 aa23.84■■□□□ 1.41
SHROOM1-202ENST00000378676 IL25Q9H293 177 aa23.84■■□□□ 1.41
SHROOM1-202ENST00000378676 ANO2Q9NQ90 1003 aa23.84■■□□□ 1.41
SHROOM1-202ENST00000378676 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.41
SHROOM1-202ENST00000378676 PXDNQ92626 1479 aa23.83■■□□□ 1.41
SHROOM1-202ENST00000378676 POLA2Q14181 598 aa23.83■■□□□ 1.4
SHROOM1-202ENST00000378676 TMX3Q96JJ7 454 aa23.83■■□□□ 1.4
SHROOM1-202ENST00000378676 AOX1Q06278 1338 aa23.82■■□□□ 1.4
SHROOM1-202ENST00000378676 CHAMP1Q96JM3 812 aa23.82■■□□□ 1.4
SHROOM1-202ENST00000378676 CRYBG1Q9Y4K1 1723 aa23.82■■□□□ 1.4
SHROOM1-202ENST00000378676 ADGRL3Q9HAR2 1447 aa23.81■■□□□ 1.4
SHROOM1-202ENST00000378676 ANXA1P04083 346 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms