RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 LIMCH1Q9UPQ0 1083 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 CCDC69A6NI79 296 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 SERPINC1P01008 464 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 HYPKQ9NX55 129 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 SCAND2PQ9GZW5 306 aaPredicted RBP13.32□□□□□ -0.28
RPGR-203ENST00000378505 SYCP2Q9BX26 1530 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 ARHGEF12Q9NZN5 1544 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 OFD1O75665 1012 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 NAP1L1P55209 391 aaKnown RBP13.32□□□□□ -0.28
RPGR-203ENST00000378505 MPRIPQ6WCQ1 1025 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 SMARCE1Q969G3 411 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 ACEP12821 1306 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 FOXO3O43524 673 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 TTC22Q5TAA0 569 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
RPGR-203ENST00000378505 DDX11Q96FC9 970 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 CCDC43Q96MW1 224 aaKnown RBP13.31□□□□□ -0.28
RPGR-203ENST00000378505 DACH1Q9UI36 760 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 PIK3C2GO75747 1445 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
RPGR-203ENST00000378505 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 AKAP2Q9Y2D5 859 aa13.31□□□□□ -0.28
RPGR-203ENST00000378505 CTTNBP2Q8WZ74 1663 aa13.3□□□□□ -0.28
RPGR-203ENST00000378505 STARD3NLO95772 234 aa13.3□□□□□ -0.28
RPGR-203ENST00000378505 FBLN1P23142 703 aa13.3□□□□□ -0.28
RPGR-203ENST00000378505 MYD88Q99836 296 aa13.3□□□□□ -0.28
RPGR-203ENST00000378505 PTCD1O75127 700 aaKnown RBP13.3□□□□□ -0.28
RPGR-203ENST00000378505 BCL11BQ9C0K0 894 aaPredicted RBP13.3□□□□□ -0.28
RPGR-203ENST00000378505 A2MP01023 1474 aa13.3□□□□□ -0.28
RPGR-203ENST00000378505 WDR62O43379 1518 aa13.3□□□□□ -0.28
RPGR-203ENST00000378505 IDH1O75874 414 aaKnown RBP13.29□□□□□ -0.28
RPGR-203ENST00000378505 CCDC112Q8NEF3 446 aa13.29□□□□□ -0.28
RPGR-203ENST00000378505 CCDC8Q9H0W5 538 aaPredicted RBP13.29□□□□□ -0.28
RPGR-203ENST00000378505 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
RPGR-203ENST00000378505 TDO2P48775 406 aa13.29□□□□□ -0.28
RPGR-203ENST00000378505 CCDC183Q5T5S1 534 aa13.29□□□□□ -0.28
RPGR-203ENST00000378505 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
RPGR-203ENST00000378505 UBAC1Q9BSL1 405 aa13.29□□□□□ -0.28
RPGR-203ENST00000378505 RUFY1Q96T51 708 aa13.29□□□□□ -0.28
RPGR-203ENST00000378505 MAGEC2Q9UBF1 373 aaPredicted RBP13.29□□□□□ -0.28
RPGR-203ENST00000378505 TRAPPC8Q9Y2L5 1435 aa13.29□□□□□ -0.28
RPGR-203ENST00000378505 CCDC85AQ96PX6 553 aaPredicted RBP13.28□□□□□ -0.28
RPGR-203ENST00000378505 CARD14Q9BXL6 1004 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
RPGR-203ENST00000378505 C8orf34Q49A92 452 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 HSP90AB2PQ58FF8 381 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 PPP1R42Q7Z4L9 355 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 ANKRD44Q8N8A2 993 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 NOL7Q9UMY1 257 aaKnown RBP13.28□□□□□ -0.28
RPGR-203ENST00000378505 PIK3R4Q99570 1358 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
RPGR-203ENST00000378505 IFIT1P09914 478 aaKnown RBP13.28□□□□□ -0.28
RPGR-203ENST00000378505 EPS15P42566 896 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 METTL24Q5JXM2 366 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 CBFA2T2O43439 604 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 BAG4O95429 457 aaKnown RBP13.28□□□□□ -0.28
RPGR-203ENST00000378505 FILIP1Q7Z7B0 1213 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 WASF1Q92558 559 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
RPGR-203ENST00000378505 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.28
RPGR-203ENST00000378505 RBM10P98175 930 aaKnown RBP13.27□□□□□ -0.28
RPGR-203ENST00000378505 POLKQ9UBT6 870 aa13.27□□□□□ -0.28
RPGR-203ENST00000378505 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.29
RPGR-203ENST00000378505 PPFIBP1Q86W92 1011 aa13.27□□□□□ -0.29
RPGR-203ENST00000378505 AK7Q96M32 723 aa13.27□□□□□ -0.29
RPGR-203ENST00000378505 MEIS3Q99687 375 aa13.27□□□□□ -0.29
RPGR-203ENST00000378505 KIAA0556O60303 1618 aa13.27□□□□□ -0.29
RPGR-203ENST00000378505 PZPP20742 1482 aa13.27□□□□□ -0.29
RPGR-203ENST00000378505 AIDAQ96BJ3 306 aa13.27□□□□□ -0.29
RPGR-203ENST00000378505 LRP2BPQ9P2M1 347 aa13.27□□□□□ -0.29
RPGR-203ENST00000378505 MRPL50Q8N5N7 158 aaKnown RBP13.27□□□□□ -0.29
RPGR-203ENST00000378505 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.29
RPGR-203ENST00000378505 IKQ13123 557 aaPredicted RBP13.26□□□□□ -0.29
RPGR-203ENST00000378505 STK11IPQ8N1F8 1099 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 EIF2AK4Q9P2K8 1649 aaKnown RBP13.26□□□□□ -0.29
RPGR-203ENST00000378505 A0A087WZG4 1122 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 CAGE1Q8TC20 777 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 SMTNL1A8MU46 457 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 SDSP20132 328 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 SETQ01105 290 aaPredicted RBP13.26□□□□□ -0.29
RPGR-203ENST00000378505 STIM1Q13586 685 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 C8orf58Q8NAV2 365 aa13.26□□□□□ -0.29
RPGR-203ENST00000378505 RLBP1P12271 317 aa13.25□□□□□ -0.29
RPGR-203ENST00000378505 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
RPGR-203ENST00000378505 KLHL40Q2TBA0 621 aa13.25□□□□□ -0.29
RPGR-203ENST00000378505 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
RPGR-203ENST00000378505 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
RPGR-203ENST00000378505 RAI14Q9P0K7 980 aa13.25□□□□□ -0.29
RPGR-203ENST00000378505 MAP3K2Q9Y2U5 619 aa13.25□□□□□ -0.29
RPGR-203ENST00000378505 UQCRHLA0A096LP55 91 aa13.25□□□□□ -0.29
RPGR-203ENST00000378505 UQCRHP07919 91 aa13.25□□□□□ -0.29
RPGR-203ENST00000378505 CDR1P51861 262 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
RPGR-203ENST00000378505 RHPN1Q8TCX5 695 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms