RNA–Protein interactions for RNA: ENST00000378126.4

PCDHA6-201, Transcript of protocadherin alpha 6, humanhuman

BASIC

Gene PCDHA6, Length 3,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-201ENST00000378126 SSH2Q76I76 1423 aa17.06■□□□□ 0.32
PCDHA6-201ENST00000378126 NCLP19338 710 aaKnown RBP17.06■□□□□ 0.32
PCDHA6-201ENST00000378126 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
PCDHA6-201ENST00000378126 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
PCDHA6-201ENST00000378126 FOXD4L6Q3SYB3 417 aaPredicted RBP17.06■□□□□ 0.32
PCDHA6-201ENST00000378126 FOXD4L3Q6VB84 417 aaPredicted RBP17.06■□□□□ 0.32
PCDHA6-201ENST00000378126 DTNBO60941 627 aa17.06■□□□□ 0.32
PCDHA6-201ENST00000378126 PKP1Q13835 747 aa17.06■□□□□ 0.32
PCDHA6-201ENST00000378126 GOLGA6L3A6NEY3 463 aa17.05■□□□□ 0.32
PCDHA6-201ENST00000378126 PDE1AP54750 535 aa17.05■□□□□ 0.32
PCDHA6-201ENST00000378126 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
PCDHA6-201ENST00000378126 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
PCDHA6-201ENST00000378126 USP26Q9BXU7 913 aa17.04■□□□□ 0.32
PCDHA6-201ENST00000378126 CHPF2Q9P2E5 772 aa17.04■□□□□ 0.32
PCDHA6-201ENST00000378126 ZNF530Q6P9A1 599 aaPredicted RBP17.04■□□□□ 0.32
PCDHA6-201ENST00000378126 PRAMEF22A3QJZ6 481 aa17.04■□□□□ 0.32
PCDHA6-201ENST00000378126 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
PCDHA6-201ENST00000378126 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
PCDHA6-201ENST00000378126 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
PCDHA6-201ENST00000378126 TEFQ10587 303 aa17.03■□□□□ 0.32
PCDHA6-201ENST00000378126 ZGPATQ8N5A5 531 aaKnown RBP17.03■□□□□ 0.32
PCDHA6-201ENST00000378126 SNX21Q969T3 373 aa17.03■□□□□ 0.32
PCDHA6-201ENST00000378126 ANO2Q9NQ90 1003 aa17.03■□□□□ 0.32
PCDHA6-201ENST00000378126 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
PCDHA6-201ENST00000378126 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.32
PCDHA6-201ENST00000378126 LRRCC1Q9C099 1032 aa17.02■□□□□ 0.32
PCDHA6-201ENST00000378126 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.32
PCDHA6-201ENST00000378126 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.32
PCDHA6-201ENST00000378126 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.31
PCDHA6-201ENST00000378126 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
PCDHA6-201ENST00000378126 NBPF7P0C2Y1 421 aaPredicted RBP17.01■□□□□ 0.31
PCDHA6-201ENST00000378126 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
PCDHA6-201ENST00000378126 NRKQ7Z2Y5 1582 aa17.01■□□□□ 0.31
PCDHA6-201ENST00000378126 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
PCDHA6-201ENST00000378126 KDRP35968 1356 aa17.01■□□□□ 0.31
PCDHA6-201ENST00000378126 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
PCDHA6-201ENST00000378126 MX1P20591 662 aa17■□□□□ 0.31
PCDHA6-201ENST00000378126 OS9Q13438 667 aaPredicted RBP17■□□□□ 0.31
PCDHA6-201ENST00000378126 BTBD11A6QL63 1104 aa16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 PIP4K2AP48426 406 aaPredicted RBP16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 NEK4P51957 841 aa16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 PPP1R42Q7Z4L9 355 aa16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 SRGAP3O43295 1099 aa16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 GNAI3P08754 354 aa16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 AK9Q5TCS8 1911 aa16.99■□□□□ 0.31
PCDHA6-201ENST00000378126 PIK3C2AO00443 1686 aa16.98■□□□□ 0.31
PCDHA6-201ENST00000378126 DDX11L8A8MPP1 907 aa16.98■□□□□ 0.31
PCDHA6-201ENST00000378126 ERC2O15083 957 aa16.98■□□□□ 0.31
PCDHA6-201ENST00000378126 RAB3GAP1Q15042 981 aa16.98■□□□□ 0.31
PCDHA6-201ENST00000378126 RABEP1Q15276 862 aa16.98■□□□□ 0.31
PCDHA6-201ENST00000378126 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
PCDHA6-201ENST00000378126 PROSER3Q2NL68 480 aa16.97■□□□□ 0.31
PCDHA6-201ENST00000378126 TOPAZ1Q8N9V7 1692 aa16.97■□□□□ 0.31
PCDHA6-201ENST00000378126 IP6K1Q92551 441 aa16.97■□□□□ 0.31
PCDHA6-201ENST00000378126 SRCIN1Q9C0H9 1055 aa16.97■□□□□ 0.31
PCDHA6-201ENST00000378126 DDIT3P35638 169 aa16.97■□□□□ 0.31
PCDHA6-201ENST00000378126 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
PCDHA6-201ENST00000378126 ATP8B2P98198 1209 aa16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 CABLES1Q8TDN4 633 aa16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 IL25Q9H293 177 aa16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 REC8O95072 547 aa16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 GCP02774 474 aa16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 L1TD1Q5T7N2 865 aaKnown RBP16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.31
PCDHA6-201ENST00000378126 CWF19L2Q2TBE0 894 aaKnown RBP16.95■□□□□ 0.3
PCDHA6-201ENST00000378126 C1orf141Q5JVX7 400 aa16.95■□□□□ 0.3
PCDHA6-201ENST00000378126 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
PCDHA6-201ENST00000378126 GAS2L3Q86XJ1 694 aa16.95■□□□□ 0.3
PCDHA6-201ENST00000378126 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
PCDHA6-201ENST00000378126 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
PCDHA6-201ENST00000378126 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
PCDHA6-201ENST00000378126 ARHGAP23Q9P227 1491 aa16.94■□□□□ 0.3
PCDHA6-201ENST00000378126 ST18O60284 1047 aa16.94■□□□□ 0.3
PCDHA6-201ENST00000378126 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
PCDHA6-201ENST00000378126 PROSER2Q86WR7 435 aaPredicted RBP16.94■□□□□ 0.3
PCDHA6-201ENST00000378126 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
PCDHA6-201ENST00000378126 MYL6BP14649 208 aa16.93■□□□□ 0.3
PCDHA6-201ENST00000378126 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
PCDHA6-201ENST00000378126 SLIT1O75093 1534 aa16.93■□□□□ 0.3
PCDHA6-201ENST00000378126 FER1L4A9Z1Z3 1794 aa16.93■□□□□ 0.3
PCDHA6-201ENST00000378126 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 RGPD1P0DJD0 1748 aa16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 DNAAF4Q8WXU2 420 aa16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 ESYT1Q9BSJ8 1104 aa16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 CHRNA2Q15822 529 aa16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 SIL1Q9H173 461 aa16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 MAP3K2Q9Y2U5 619 aa16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
PCDHA6-201ENST00000378126 NALCNQ8IZF0 1738 aa16.91■□□□□ 0.3
PCDHA6-201ENST00000378126 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
PCDHA6-201ENST00000378126 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
PCDHA6-201ENST00000378126 GOLGA6L22H0YM25 854 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms