RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
CKAP2-202ENST00000378034 NUP188Q5SRE5 1749 aa17.48■□□□□ 0.39
CKAP2-202ENST00000378034 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
CKAP2-202ENST00000378034 PROM2Q8N271 834 aa17.48■□□□□ 0.39
CKAP2-202ENST00000378034 PALLDQ8WX93 1383 aa17.48■□□□□ 0.39
CKAP2-202ENST00000378034 CCDC146Q8IYE0 955 aa17.48■□□□□ 0.39
CKAP2-202ENST00000378034 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
CKAP2-202ENST00000378034 TEFQ10587 303 aa17.47■□□□□ 0.39
CKAP2-202ENST00000378034 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
CKAP2-202ENST00000378034 LMOD3Q0VAK6 560 aa17.46■□□□□ 0.39
CKAP2-202ENST00000378034 ATG3Q9NT62 314 aa17.46■□□□□ 0.39
CKAP2-202ENST00000378034 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
CKAP2-202ENST00000378034 RIPK4P57078 832 aa17.45■□□□□ 0.38
CKAP2-202ENST00000378034 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
CKAP2-202ENST00000378034 MCM10Q7L590 875 aa17.44■□□□□ 0.38
CKAP2-202ENST00000378034 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
CKAP2-202ENST00000378034 PAPPAQ13219 1627 aa17.44■□□□□ 0.38
CKAP2-202ENST00000378034 CCNL1Q9UK58 526 aaPredicted RBP17.44■□□□□ 0.38
CKAP2-202ENST00000378034 LOC102724428A0A0B4J2F2 783 aa17.42■□□□□ 0.38
CKAP2-202ENST00000378034 SIK1P57059 783 aa17.42■□□□□ 0.38
CKAP2-202ENST00000378034 LRRC4BQ9NT99 713 aa17.42■□□□□ 0.38
CKAP2-202ENST00000378034 APAF1O14727 1248 aa17.41■□□□□ 0.38
CKAP2-202ENST00000378034 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
CKAP2-202ENST00000378034 TAF7Q15545 349 aaPredicted RBP17.4■□□□□ 0.38
CKAP2-202ENST00000378034 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
CKAP2-202ENST00000378034 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
CKAP2-202ENST00000378034 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
CKAP2-202ENST00000378034 RRP7AQ9Y3A4 280 aaKnown RBP17.4■□□□□ 0.38
CKAP2-202ENST00000378034 C5P01031 1676 aa17.4■□□□□ 0.38
CKAP2-202ENST00000378034 TAF1LQ8IZX4 1826 aa17.4■□□□□ 0.38
CKAP2-202ENST00000378034 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.38
CKAP2-202ENST00000378034 BTBD11A6QL63 1104 aa17.39■□□□□ 0.37
CKAP2-202ENST00000378034 TTC5Q8N0Z6 440 aa17.39■□□□□ 0.37
CKAP2-202ENST00000378034 MIER1Q8N108 512 aa17.39■□□□□ 0.37
CKAP2-202ENST00000378034 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.37
CKAP2-202ENST00000378034 ATP6V1AP38606 617 aa17.39■□□□□ 0.37
CKAP2-202ENST00000378034 ZNF790Q6PG37 636 aa17.39■□□□□ 0.37
CKAP2-202ENST00000378034 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
CKAP2-202ENST00000378034 STK32BQ9NY57 414 aa17.39■□□□□ 0.37
CKAP2-202ENST00000378034 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.37
CKAP2-202ENST00000378034 SLC39A6Q13433 755 aa17.38■□□□□ 0.37
CKAP2-202ENST00000378034 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
CKAP2-202ENST00000378034 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
CKAP2-202ENST00000378034 BABAM1Q9NWV8 329 aa17.37■□□□□ 0.37
CKAP2-202ENST00000378034 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
CKAP2-202ENST00000378034 KCNQ4P56696 695 aa17.37■□□□□ 0.37
CKAP2-202ENST00000378034 SLC15A2Q16348 729 aa17.37■□□□□ 0.37
CKAP2-202ENST00000378034 AKT1S1Q96B36 256 aa17.36■□□□□ 0.37
CKAP2-202ENST00000378034 SLC4A9Q96Q91 983 aa17.36■□□□□ 0.37
CKAP2-202ENST00000378034 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
CKAP2-202ENST00000378034 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
CKAP2-202ENST00000378034 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
CKAP2-202ENST00000378034 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
CKAP2-202ENST00000378034 C4BP0C0L5 1744 aa17.35■□□□□ 0.37
CKAP2-202ENST00000378034 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
CKAP2-202ENST00000378034 ITPK1Q13572 414 aa17.35■□□□□ 0.37
CKAP2-202ENST00000378034 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
CKAP2-202ENST00000378034 QSER1Q2KHR3 1735 aa17.34■□□□□ 0.37
CKAP2-202ENST00000378034 KDM3BQ7LBC6 1761 aa17.34■□□□□ 0.37
CKAP2-202ENST00000378034 COL5A3P25940 1745 aaPredicted RBP17.34■□□□□ 0.37
CKAP2-202ENST00000378034 R3HDM1Q15032 1099 aaKnown RBP17.34■□□□□ 0.37
CKAP2-202ENST00000378034 TJP1Q07157 1748 aa17.34■□□□□ 0.37
CKAP2-202ENST00000378034 ZNF827Q17R98 1081 aa17.33■□□□□ 0.36
CKAP2-202ENST00000378034 RC3H1Q5TC82 1133 aaKnown RBP17.33■□□□□ 0.36
CKAP2-202ENST00000378034 LINC00116Q8NCU8 138 aa17.33■□□□□ 0.36
CKAP2-202ENST00000378034 ZNF496Q96IT1 587 aaPredicted RBP17.33■□□□□ 0.36
CKAP2-202ENST00000378034 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
CKAP2-202ENST00000378034 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
CKAP2-202ENST00000378034 TFCP2L1Q9NZI6 479 aa17.31■□□□□ 0.36
CKAP2-202ENST00000378034 CNTNAP4Q9C0A0 1308 aa17.31■□□□□ 0.36
CKAP2-202ENST00000378034 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
CKAP2-202ENST00000378034 KCNQ3O43525 872 aa17.31■□□□□ 0.36
CKAP2-202ENST00000378034 AK7Q96M32 723 aa17.31■□□□□ 0.36
CKAP2-202ENST00000378034 FLAD1Q8NFF5 587 aa17.3■□□□□ 0.36
CKAP2-202ENST00000378034 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
CKAP2-202ENST00000378034 TSPYL4Q9UJ04 414 aa17.3■□□□□ 0.36
CKAP2-202ENST00000378034 CHL1O00533 1208 aa17.29■□□□□ 0.36
CKAP2-202ENST00000378034 DNAJC10Q8IXB1 793 aa17.29■□□□□ 0.36
CKAP2-202ENST00000378034 CFAP44Q96MT7 982 aa17.29■□□□□ 0.36
CKAP2-202ENST00000378034 TUBGCP6Q96RT7 1819 aa17.29■□□□□ 0.36
CKAP2-202ENST00000378034 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
CKAP2-202ENST00000378034 WWC1Q8IX03 1113 aa17.29■□□□□ 0.36
CKAP2-202ENST00000378034 UBR3Q6ZT12 1888 aa17.28■□□□□ 0.36
CKAP2-202ENST00000378034 STARD3NLO95772 234 aa17.28■□□□□ 0.36
CKAP2-202ENST00000378034 CYP19A1P11511 503 aaPredicted RBP17.28■□□□□ 0.36
CKAP2-202ENST00000378034 IFT57Q9NWB7 429 aa17.28■□□□□ 0.36
CKAP2-202ENST00000378034 CASZ1Q86V15 1759 aa17.28■□□□□ 0.36
CKAP2-202ENST00000378034 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
CKAP2-202ENST00000378034 GNAI1P63096 354 aa17.28■□□□□ 0.36
CKAP2-202ENST00000378034 IL16Q14005 1332 aa17.27■□□□□ 0.36
CKAP2-202ENST00000378034 ZNF853P0CG23 659 aa17.27■□□□□ 0.36
CKAP2-202ENST00000378034 SSFA2P28290 1259 aa17.27■□□□□ 0.36
CKAP2-202ENST00000378034 CRKLP46109 303 aaKnown RBP17.27■□□□□ 0.36
CKAP2-202ENST00000378034 PNPLA7Q6ZV29 1317 aa17.26■□□□□ 0.35
CKAP2-202ENST00000378034 GNPATO15228 680 aa17.26■□□□□ 0.35
CKAP2-202ENST00000378034 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
CKAP2-202ENST00000378034 CCDC87Q9NVE4 849 aa17.26■□□□□ 0.35
CKAP2-202ENST00000378034 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
CKAP2-202ENST00000378034 MYH14Q7Z406 1995 aaKnown RBP17.26■□□□□ 0.35
CKAP2-202ENST00000378034 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms