RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 IL25Q9H293 177 aa21.94■■□□□ 1.1
GNE-201ENST00000377902 BRD1O95696 1058 aa21.94■■□□□ 1.1
GNE-201ENST00000377902 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
GNE-201ENST00000377902 HS1BP3Q53T59 392 aa21.94■■□□□ 1.1
GNE-201ENST00000377902 ZNF500O60304 480 aaPredicted RBP21.93■■□□□ 1.1
GNE-201ENST00000377902 GADD45BO75293 160 aaPredicted RBP21.93■■□□□ 1.1
GNE-201ENST00000377902 ZKSCAN5Q9Y2L8 839 aa21.93■■□□□ 1.1
GNE-201ENST00000377902 GNAI2P04899 355 aa21.92■■□□□ 1.1
GNE-201ENST00000377902 PDCL3Q9H2J4 239 aa21.92■■□□□ 1.1
GNE-201ENST00000377902 FAM13BQ9NYF5 915 aa21.92■■□□□ 1.1
GNE-201ENST00000377902 TTC21BQ7Z4L5 1316 aa21.92■■□□□ 1.1
GNE-201ENST00000377902 SALL3Q9BXA9 1300 aa21.92■■□□□ 1.1
GNE-201ENST00000377902 MX1P20591 662 aa21.92■■□□□ 1.1
GNE-201ENST00000377902 MAP3K19Q56UN5 1328 aa21.91■■□□□ 1.1
GNE-201ENST00000377902 MON2Q7Z3U7 1717 aa21.91■■□□□ 1.1
GNE-201ENST00000377902 CHMLP26374 656 aa21.91■■□□□ 1.1
GNE-201ENST00000377902 LRRCC1Q9C099 1032 aa21.91■■□□□ 1.1
GNE-201ENST00000377902 C3P01024 1663 aa21.91■■□□□ 1.1
GNE-201ENST00000377902 ACEP12821 1306 aa21.9■■□□□ 1.1
GNE-201ENST00000377902 CCT4P50991 539 aaKnown RBP21.9■■□□□ 1.1
GNE-201ENST00000377902 CUL4AQ13619 759 aa21.9■■□□□ 1.1
GNE-201ENST00000377902 PKNOX2Q96KN3 472 aa21.9■■□□□ 1.1
GNE-201ENST00000377902 MAP4K4O95819 1239 aaPredicted RBP21.89■■□□□ 1.09
GNE-201ENST00000377902 NRXN3Q9Y4C0 1643 aa21.89■■□□□ 1.09
GNE-201ENST00000377902 DTNBO60941 627 aa21.89■■□□□ 1.09
GNE-201ENST00000377902 LARP6Q9BRS8 491 aaKnown RBP21.89■■□□□ 1.09
GNE-201ENST00000377902 IL1RAPL2Q9NP60 686 aa21.89■■□□□ 1.09
GNE-201ENST00000377902 RIMS1Q86UR5 1692 aaKnown RBP21.88■■□□□ 1.09
GNE-201ENST00000377902 FKBP5Q13451 457 aaPredicted RBP21.88■■□□□ 1.09
GNE-201ENST00000377902 RTF1Q92541 710 aaKnown RBP21.88■■□□□ 1.09
GNE-201ENST00000377902 UQCRHLA0A096LP55 91 aa21.88■■□□□ 1.09
GNE-201ENST00000377902 UQCRHP07919 91 aa21.88■■□□□ 1.09
GNE-201ENST00000377902 ARID3AQ99856 593 aa21.88■■□□□ 1.09
GNE-201ENST00000377902 MBD3O95983 291 aa21.87■■□□□ 1.09
GNE-201ENST00000377902 PEAK1Q9H792 1746 aa21.87■■□□□ 1.09
GNE-201ENST00000377902 LRRFIP2Q9Y608 721 aaKnown RBP21.87■■□□□ 1.09
GNE-201ENST00000377902 NRKQ7Z2Y5 1582 aa21.86■■□□□ 1.09
GNE-201ENST00000377902 FLIIQ13045 1269 aa21.86■■□□□ 1.09
GNE-201ENST00000377902 MCCP23508 829 aa21.85■■□□□ 1.09
GNE-201ENST00000377902 USP48Q86UV5 1035 aa21.85■■□□□ 1.09
GNE-201ENST00000377902 NUTM1Q86Y26 1132 aa21.85■■□□□ 1.09
GNE-201ENST00000377902 TSPY26PQ9H489 355 aa21.85■■□□□ 1.09
GNE-201ENST00000377902 MCM2P49736 904 aa21.85■■□□□ 1.09
GNE-201ENST00000377902 AKAP12Q02952 1782 aa21.85■■□□□ 1.09
GNE-201ENST00000377902 ROBO2Q9HCK4 1378 aa21.84■■□□□ 1.09
GNE-201ENST00000377902 ATP8B2P98198 1209 aa21.84■■□□□ 1.09
GNE-201ENST00000377902 STK31Q9BXU1 1019 aa21.84■■□□□ 1.09
GNE-201ENST00000377902 CCDC39Q9UFE4 941 aa21.84■■□□□ 1.09
GNE-201ENST00000377902 ZNF830Q96NB3 372 aaPredicted RBP21.84■■□□□ 1.09
GNE-201ENST00000377902 ITSN1Q15811 1721 aa21.83■■□□□ 1.09
GNE-201ENST00000377902 PTMAP06454 111 aaKnown RBP21.83■■□□□ 1.08
GNE-201ENST00000377902 OVOS2A0A0J9YW53 1432 aa21.82■■□□□ 1.08
GNE-201ENST00000377902 OVOS2Q6IE36 1432 aa21.82■■□□□ 1.08
GNE-201ENST00000377902 TERF1P54274 439 aa21.82■■□□□ 1.08
GNE-201ENST00000377902 INTS4Q96HW7 963 aaKnown RBP21.82■■□□□ 1.08
GNE-201ENST00000377902 TCHHQ07283 1943 aa21.81■■□□□ 1.08
GNE-201ENST00000377902 JARID2Q92833 1246 aaPredicted RBP21.81■■□□□ 1.08
GNE-201ENST00000377902 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.81■■□□□ 1.08
GNE-201ENST00000377902 ANAPC15P60006 121 aa21.8■■□□□ 1.08
GNE-201ENST00000377902 EYA1Q99502 592 aa21.8■■□□□ 1.08
GNE-201ENST00000377902 SRCIN1Q9C0H9 1055 aa21.8■■□□□ 1.08
GNE-201ENST00000377902 TUBGCP6Q96RT7 1819 aa21.79■■□□□ 1.08
GNE-201ENST00000377902 GNAI3P08754 354 aa21.79■■□□□ 1.08
GNE-201ENST00000377902 USP44Q9H0E7 712 aa21.79■■□□□ 1.08
GNE-201ENST00000377902 CNPY2Q9Y2B0 182 aa21.79■■□□□ 1.08
GNE-201ENST00000377902 STAP2Q9UGK3 403 aa21.79■■□□□ 1.08
GNE-201ENST00000377902 SPATA31D1Q6ZQQ2 1576 aa21.79■■□□□ 1.08
GNE-201ENST00000377902 FAM69CQ0P6D2 419 aa21.78■■□□□ 1.08
GNE-201ENST00000377902 USP25Q9UHP3 1055 aa21.78■■□□□ 1.08
GNE-201ENST00000377902 RGPD1P0DJD0 1748 aa21.78■■□□□ 1.08
GNE-201ENST00000377902 CPA1P15085 419 aa21.77■■□□□ 1.08
GNE-201ENST00000377902 RPAP1Q9BWH6 1393 aaPredicted RBP21.77■■□□□ 1.08
GNE-201ENST00000377902 MCM5P33992 734 aa21.77■■□□□ 1.08
GNE-201ENST00000377902 HSPA4P34932 840 aa21.77■■□□□ 1.08
GNE-201ENST00000377902 C17orf53Q8N3J3 647 aaPredicted RBP21.77■■□□□ 1.08
GNE-201ENST00000377902 PHAXQ9H814 394 aaKnown RBP21.77■■□□□ 1.08
GNE-201ENST00000377902 CSPP1Q1MSJ5 1256 aa21.76■■□□□ 1.07
GNE-201ENST00000377902 CCDC30Q5VVM6 783 aa21.76■■□□□ 1.07
GNE-201ENST00000377902 USP6P35125 1406 aa21.76■■□□□ 1.07
GNE-201ENST00000377902 CYB5RLQ6IPT4 315 aa21.76■■□□□ 1.07
GNE-201ENST00000377902 RASEFQ8IZ41 740 aa21.76■■□□□ 1.07
GNE-201ENST00000377902 SYAP1Q96A49 352 aaPredicted RBP21.76■■□□□ 1.07
GNE-201ENST00000377902 CEP170BQ9Y4F5 1589 aaPredicted RBP21.75■■□□□ 1.07
GNE-201ENST00000377902 WDR33Q9C0J8 1336 aaKnown RBP21.75■■□□□ 1.07
GNE-201ENST00000377902 SURF6O75683 361 aaKnown RBP21.75■■□□□ 1.07
GNE-201ENST00000377902 AMPHP49418 695 aa21.75■■□□□ 1.07
GNE-201ENST00000377902 UBTFL1P0CB47 393 aaPredicted RBP21.74■■□□□ 1.07
GNE-201ENST00000377902 TSC1Q92574 1164 aa21.74■■□□□ 1.07
GNE-201ENST00000377902 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
GNE-201ENST00000377902 PLEKHG3A1L390 1219 aa21.74■■□□□ 1.07
GNE-201ENST00000377902 HCLS1P14317 486 aaPredicted RBP21.74■■□□□ 1.07
GNE-201ENST00000377902 PPP1R42Q7Z4L9 355 aa21.74■■□□□ 1.07
GNE-201ENST00000377902 SIRT1Q96EB6 747 aa21.74■■□□□ 1.07
GNE-201ENST00000377902 SNX14Q9Y5W7 946 aa21.74■■□□□ 1.07
GNE-201ENST00000377902 TECPR2O15040 1411 aa21.73■■□□□ 1.07
GNE-201ENST00000377902 NUTM2GQ5VZR2 741 aa21.73■■□□□ 1.07
GNE-201ENST00000377902 TTC12Q9H892 705 aaPredicted RBP21.73■■□□□ 1.07
GNE-201ENST00000377902 USP31Q70CQ4 1352 aa21.73■■□□□ 1.07
GNE-201ENST00000377902 AK2P54819 239 aa21.73■■□□□ 1.07
GNE-201ENST00000377902 SASS6Q6UVJ0 657 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms