RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 POLR3DP05423 398 aaPredicted RBP22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 PRPF40BQ6NWY9 871 aaKnown RBP22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 MINDY4BA8MYZ0 360 aa22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 IFIT1P09914 478 aaKnown RBP22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 FAM193AP78312 1265 aa22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 EFCAB5A4FU69 1503 aa22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 TAF4BQ92750 862 aa22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 CFAP100Q494V2 611 aa22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 CCDC83Q8IWF9 413 aa22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 MYD88Q99836 296 aa22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 FERMT3Q86UX7 667 aa22.23■■□□□ 1.15
TBC1D4-201ENST00000377625 DAPK1P53355 1430 aa22.22■■□□□ 1.15
TBC1D4-201ENST00000377625 BOLA2Q9H3K6 86 aa22.22■■□□□ 1.15
TBC1D4-201ENST00000377625 MKNK2Q9HBH9 465 aa22.22■■□□□ 1.15
TBC1D4-201ENST00000377625 SMARCA5O60264 1052 aaPredicted RBP22.21■■□□□ 1.15
TBC1D4-201ENST00000377625 CAMK4Q16566 473 aa22.21■■□□□ 1.15
TBC1D4-201ENST00000377625 SSR1P43307 286 aaKnown RBP22.21■■□□□ 1.15
TBC1D4-201ENST00000377625 ARHGAP29Q52LW3 1261 aa22.21■■□□□ 1.15
TBC1D4-201ENST00000377625 CRACR2BQ8N4Y2 399 aaPredicted RBP22.21■■□□□ 1.15
TBC1D4-201ENST00000377625 ZPR1O75312 459 aa22.21■■□□□ 1.15
TBC1D4-201ENST00000377625 NEBLO76041 1014 aa22.21■■□□□ 1.15
TBC1D4-201ENST00000377625 PLCD4Q9BRC7 762 aa22.2■■□□□ 1.15
TBC1D4-201ENST00000377625 GOLGA6L7A0A1B0GV03 622 aa22.2■■□□□ 1.14
TBC1D4-201ENST00000377625 PPP1R12BO60237 982 aaPredicted RBP22.2■■□□□ 1.14
TBC1D4-201ENST00000377625 CCDC184Q52MB2 194 aa22.2■■□□□ 1.14
TBC1D4-201ENST00000377625 ZNF397Q8NF99 534 aaPredicted RBP22.2■■□□□ 1.14
TBC1D4-201ENST00000377625 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
TBC1D4-201ENST00000377625 NAPBQ9H115 298 aa22.2■■□□□ 1.14
TBC1D4-201ENST00000377625 TNIP1Q15025 636 aa22.19■■□□□ 1.14
TBC1D4-201ENST00000377625 JAKMIP3Q5VZ66 844 aa22.19■■□□□ 1.14
TBC1D4-201ENST00000377625 TAF7Q15545 349 aaPredicted RBP22.19■■□□□ 1.14
TBC1D4-201ENST00000377625 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
TBC1D4-201ENST00000377625 IBSPP21815 317 aaPredicted RBP22.19■■□□□ 1.14
TBC1D4-201ENST00000377625 EZRP15311 586 aaKnown RBP22.18■■□□□ 1.14
TBC1D4-201ENST00000377625 SYCE3A1L190 88 aa22.18■■□□□ 1.14
TBC1D4-201ENST00000377625 ANKIB1Q9P2G1 1089 aa22.18■■□□□ 1.14
TBC1D4-201ENST00000377625 HECW1Q76N89 1606 aa22.18■■□□□ 1.14
TBC1D4-201ENST00000377625 POTEJP0CG39 1038 aa22.18■■□□□ 1.14
TBC1D4-201ENST00000377625 USHBP1Q8N6Y0 703 aa22.17■■□□□ 1.14
TBC1D4-201ENST00000377625 CCDC196A0A1B0GTZ2 297 aa22.17■■□□□ 1.14
TBC1D4-201ENST00000377625 GBP2P32456 591 aaPredicted RBP22.17■■□□□ 1.14
TBC1D4-201ENST00000377625 DZIP1Q86YF9 867 aaKnown RBP22.17■■□□□ 1.14
TBC1D4-201ENST00000377625 UQCRHLA0A096LP55 91 aa22.17■■□□□ 1.14
TBC1D4-201ENST00000377625 UQCRHP07919 91 aa22.17■■□□□ 1.14
TBC1D4-201ENST00000377625 IFIT5Q13325 482 aaKnown RBP22.17■■□□□ 1.14
TBC1D4-201ENST00000377625 AMOTQ4VCS5 1084 aa22.17■■□□□ 1.14
TBC1D4-201ENST00000377625 IFT140Q96RY7 1462 aa22.16■■□□□ 1.14
TBC1D4-201ENST00000377625 MAP3K12Q12852 859 aa22.16■■□□□ 1.14
TBC1D4-201ENST00000377625 ALDH1L2Q3SY69 923 aa22.16■■□□□ 1.14
TBC1D4-201ENST00000377625 CTCFLQ8NI51 663 aaPredicted RBP22.16■■□□□ 1.14
TBC1D4-201ENST00000377625 MRC2Q9UBG0 1479 aa22.16■■□□□ 1.14
TBC1D4-201ENST00000377625 CCDC148Q8NFR7 591 aa22.16■■□□□ 1.14
TBC1D4-201ENST00000377625 TRIM21P19474 475 aaKnown RBP22.15■■□□□ 1.14
TBC1D4-201ENST00000377625 SSH1Q8WYL5 1049 aa22.15■■□□□ 1.14
TBC1D4-201ENST00000377625 CCDC102AQ96A19 550 aa22.15■■□□□ 1.14
TBC1D4-201ENST00000377625 C8orf76Q96K31 380 aa22.14■■□□□ 1.13
TBC1D4-201ENST00000377625 KLHL10Q6JEL2 608 aa22.14■■□□□ 1.13
TBC1D4-201ENST00000377625 RANBP6O60518 1105 aaKnown RBP22.14■■□□□ 1.13
TBC1D4-201ENST00000377625 SPA17Q15506 151 aa22.14■■□□□ 1.13
TBC1D4-201ENST00000377625 CCDC8Q9H0W5 538 aaPredicted RBP22.14■■□□□ 1.13
TBC1D4-201ENST00000377625 TRMT112Q9UI30 125 aaKnown RBP22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 SLC5A1P13866 664 aa22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 TSG101Q99816 390 aa22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 CETN2P41208 172 aa22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 FKBP15Q5T1M5 1219 aa22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 MPRIPQ6WCQ1 1025 aa22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 SCAND2PQ9GZW5 306 aaPredicted RBP22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 HSP90AB3PQ58FF7 597 aa22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 NME9Q86XW9 330 aa22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 ZNF444Q8N0Y2 327 aaPredicted RBP22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 SH2B1Q9NRF2 756 aaPredicted RBP22.13■■□□□ 1.13
TBC1D4-201ENST00000377625 HMGB1P09429 215 aaKnown RBP22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 SFPQP23246 707 aaKnown RBP eCLIP22.12■■□□□ 1.133e-6■■□□□ 12
TBC1D4-201ENST00000377625 SCLT1Q96NL6 688 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 F6X3S4 739 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 RARSP54136 660 aaKnown RBP22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 IQCA1Q86XH1 822 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 CCDC82Q8N4S0 544 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 UBXN4Q92575 508 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 ANO10Q9NW15 660 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 SLC12A7Q9Y666 1083 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 CCDC96Q2M329 555 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 TAF3Q5VWG9 929 aa22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 PHAXQ9H814 394 aaKnown RBP22.12■■□□□ 1.13
TBC1D4-201ENST00000377625 ZNF213O14771 459 aa22.11■■□□□ 1.13
TBC1D4-201ENST00000377625 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
TBC1D4-201ENST00000377625 UBA5Q9GZZ9 404 aa22.11■■□□□ 1.13
TBC1D4-201ENST00000377625 PPP4R3AQ6IN85 833 aa22.11■■□□□ 1.13
TBC1D4-201ENST00000377625 IL27Q8NEV9 243 aa22.11■■□□□ 1.13
TBC1D4-201ENST00000377625 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
TBC1D4-201ENST00000377625 GUCY1B3Q02153 619 aa22.11■■□□□ 1.13
TBC1D4-201ENST00000377625 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
TBC1D4-201ENST00000377625 ESPNB1AK53 854 aa22.1■■□□□ 1.13
TBC1D4-201ENST00000377625 CACNA2D4Q7Z3S7 1137 aa22.1■■□□□ 1.13
TBC1D4-201ENST00000377625 CHMP4BP1P59074 171 aa22.1■■□□□ 1.13
TBC1D4-201ENST00000377625 RAB34Q9BZG1 259 aa22.1■■□□□ 1.13
TBC1D4-201ENST00000377625 ANKRD18BA2A2Z9 1011 aa22.09■■□□□ 1.13
TBC1D4-201ENST00000377625 RNF41Q9H4P4 317 aaPredicted RBP22.08■■□□□ 1.13
TBC1D4-201ENST00000377625 HYPKQ9NX55 129 aa22.08■■□□□ 1.13
TBC1D4-201ENST00000377625 ZSCAN12O43309 604 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms