RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 ZDHHC9Q9Y397 364 aa15.96■□□□□ 0.15
LINC01993-201ENST00000374945 SETD1BQ9UPS6 1966 aaKnown RBP15.96■□□□□ 0.15
LINC01993-201ENST00000374945 SASS6Q6UVJ0 657 aa15.96■□□□□ 0.15
LINC01993-201ENST00000374945 MTERF4Q7Z6M4 381 aaKnown RBP15.96■□□□□ 0.15
LINC01993-201ENST00000374945 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
LINC01993-201ENST00000374945 TMEM63CQ9P1W3 806 aa15.95■□□□□ 0.14
LINC01993-201ENST00000374945 LMOD2Q6P5Q4 547 aa15.95■□□□□ 0.14
LINC01993-201ENST00000374945 LRSAM1Q6UWE0 723 aa15.95■□□□□ 0.14
LINC01993-201ENST00000374945 PRPF40AO75400 957 aaKnown RBP15.95■□□□□ 0.14
LINC01993-201ENST00000374945 USHBP1Q8N6Y0 703 aa15.95■□□□□ 0.14
LINC01993-201ENST00000374945 C8orf58Q8NAV2 365 aa15.94■□□□□ 0.14
LINC01993-201ENST00000374945 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
LINC01993-201ENST00000374945 DLG5Q8TDM6 1919 aa15.94■□□□□ 0.14
LINC01993-201ENST00000374945 ZGPATQ8N5A5 531 aaKnown RBP15.94■□□□□ 0.14
LINC01993-201ENST00000374945 USP26Q9BXU7 913 aa15.94■□□□□ 0.14
LINC01993-201ENST00000374945 CCDC39Q9UFE4 941 aa15.94■□□□□ 0.14
LINC01993-201ENST00000374945 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
LINC01993-201ENST00000374945 PLEKHM2Q8IWE5 1019 aa15.93■□□□□ 0.14
LINC01993-201ENST00000374945 MRPL50Q8N5N7 158 aaKnown RBP15.93■□□□□ 0.14
LINC01993-201ENST00000374945 ADAMTSL3P82987 1691 aa15.93■□□□□ 0.14
LINC01993-201ENST00000374945 ABCC4O15439 1325 aa15.93■□□□□ 0.14
LINC01993-201ENST00000374945 CHAMP1Q96JM3 812 aa15.92■□□□□ 0.14
LINC01993-201ENST00000374945 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
LINC01993-201ENST00000374945 NALCNQ8IZF0 1738 aa15.92■□□□□ 0.14
LINC01993-201ENST00000374945 PIK3C2AO00443 1686 aa15.92■□□□□ 0.14
LINC01993-201ENST00000374945 SYCE3A1L190 88 aa15.92■□□□□ 0.14
LINC01993-201ENST00000374945 HSPA2P54652 639 aa15.92■□□□□ 0.14
LINC01993-201ENST00000374945 EYA1Q99502 592 aa15.92■□□□□ 0.14
LINC01993-201ENST00000374945 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
LINC01993-201ENST00000374945 ZNF428Q96B54 188 aa15.91■□□□□ 0.14
LINC01993-201ENST00000374945 TTC21AQ8NDW8 1320 aa15.91■□□□□ 0.14
LINC01993-201ENST00000374945 USP31Q70CQ4 1352 aa15.91■□□□□ 0.14
LINC01993-201ENST00000374945 TTC22Q5TAA0 569 aa15.91■□□□□ 0.14
LINC01993-201ENST00000374945 ARID3AQ99856 593 aa15.91■□□□□ 0.14
LINC01993-201ENST00000374945 VAMP4O75379 141 aa15.9■□□□□ 0.14
LINC01993-201ENST00000374945 PSME1Q06323 249 aa15.9■□□□□ 0.14
LINC01993-201ENST00000374945 CHMP4BQ9H444 224 aaKnown RBP15.9■□□□□ 0.14
LINC01993-201ENST00000374945 MTHFSDQ2M296 383 aaKnown RBP15.9■□□□□ 0.14
LINC01993-201ENST00000374945 DDX17Q92841 729 aaKnown RBP15.9■□□□□ 0.14
LINC01993-201ENST00000374945 TWISTNBQ3B726 338 aaPredicted RBP15.89■□□□□ 0.13
LINC01993-201ENST00000374945 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
LINC01993-201ENST00000374945 NPHP4O75161 1426 aaPredicted RBP15.89■□□□□ 0.13
LINC01993-201ENST00000374945 GNAI1P63096 354 aa15.89■□□□□ 0.13
LINC01993-201ENST00000374945 FLT4P35916 1363 aa15.88■□□□□ 0.13
LINC01993-201ENST00000374945 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
LINC01993-201ENST00000374945 CCDC94Q9BW85 323 aaPredicted RBP15.88■□□□□ 0.13
LINC01993-201ENST00000374945 PRDM10Q9NQV6 1147 aa15.88■□□□□ 0.13
LINC01993-201ENST00000374945 ZNF853P0CG23 659 aa15.88■□□□□ 0.13
LINC01993-201ENST00000374945 HOXC9P31274 260 aa15.88■□□□□ 0.13
LINC01993-201ENST00000374945 PROSER2Q86WR7 435 aaPredicted RBP15.88■□□□□ 0.13
LINC01993-201ENST00000374945 IFT57Q9NWB7 429 aa15.88■□□□□ 0.13
LINC01993-201ENST00000374945 FMN2Q9NZ56 1722 aa15.87■□□□□ 0.13
LINC01993-201ENST00000374945 MYRIPQ8NFW9 859 aa15.87■□□□□ 0.13
LINC01993-201ENST00000374945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC01993-201ENST00000374945 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
LINC01993-201ENST00000374945 INTS3Q68E01 1043 aaKnown RBP15.86■□□□□ 0.13
LINC01993-201ENST00000374945 C16orf71Q8IYS4 520 aaPredicted RBP15.86■□□□□ 0.13
LINC01993-201ENST00000374945 RNF214Q8ND24 703 aa15.86■□□□□ 0.13
LINC01993-201ENST00000374945 DMTNQ08495 405 aa15.85■□□□□ 0.13
LINC01993-201ENST00000374945 UTP14CQ5TAP6 766 aaKnown RBP15.85■□□□□ 0.13
LINC01993-201ENST00000374945 DCTPP1Q9H773 170 aa15.85■□□□□ 0.13
LINC01993-201ENST00000374945 ST18O60284 1047 aa15.85■□□□□ 0.13
LINC01993-201ENST00000374945 JARID2Q92833 1246 aaPredicted RBP15.85■□□□□ 0.13
LINC01993-201ENST00000374945 ZNF142P52746 1687 aaPredicted RBP15.85■□□□□ 0.13
LINC01993-201ENST00000374945 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
LINC01993-201ENST00000374945 KIAA2012Q0VF49 1180 aa15.84■□□□□ 0.13
LINC01993-201ENST00000374945 ZNF710Q8N1W2 664 aa15.84■□□□□ 0.13
LINC01993-201ENST00000374945 OTUD7AQ8TE49 926 aaPredicted RBP15.84■□□□□ 0.13
LINC01993-201ENST00000374945 MBD3O95983 291 aa15.84■□□□□ 0.13
LINC01993-201ENST00000374945 LMOD3Q0VAK6 560 aa15.84■□□□□ 0.13
LINC01993-201ENST00000374945 ZSCAN20P17040 1043 aaPredicted RBP15.84■□□□□ 0.13
LINC01993-201ENST00000374945 NECTIN2Q92692 538 aa15.84■□□□□ 0.13
LINC01993-201ENST00000374945 LRRC59Q96AG4 307 aaKnown RBP15.84■□□□□ 0.13
LINC01993-201ENST00000374945 ATP10DQ9P241 1426 aa15.83■□□□□ 0.13
LINC01993-201ENST00000374945 SDSP20132 328 aa15.83■□□□□ 0.12
LINC01993-201ENST00000374945 ZHX1Q9UKY1 873 aaPredicted RBP15.83■□□□□ 0.12
LINC01993-201ENST00000374945 ADGRL3Q9HAR2 1447 aa15.83■□□□□ 0.12
LINC01993-201ENST00000374945 KIF24Q5T7B8 1368 aa15.82■□□□□ 0.12
LINC01993-201ENST00000374945 PDE4CQ08493 712 aa15.82■□□□□ 0.12
LINC01993-201ENST00000374945 TSPY26PQ9H489 355 aa15.82■□□□□ 0.12
LINC01993-201ENST00000374945 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
LINC01993-201ENST00000374945 IGSF1Q8N6C5 1336 aa15.81■□□□□ 0.12
LINC01993-201ENST00000374945 BRD1O95696 1058 aa15.81■□□□□ 0.12
LINC01993-201ENST00000374945 FOXD4L5Q5VV16 416 aaPredicted RBP15.81■□□□□ 0.12
LINC01993-201ENST00000374945 FOXD4L4Q8WXT5 416 aaPredicted RBP15.81■□□□□ 0.12
LINC01993-201ENST00000374945 TSC1Q92574 1164 aa15.81■□□□□ 0.12
LINC01993-201ENST00000374945 MARF1Q9Y4F3 1742 aaKnown RBP15.81■□□□□ 0.12
LINC01993-201ENST00000374945 RTF1Q92541 710 aaKnown RBP15.81■□□□□ 0.12
LINC01993-201ENST00000374945 RGPD1P0DJD0 1748 aa15.8■□□□□ 0.12
LINC01993-201ENST00000374945 PDIA4P13667 645 aaKnown RBP15.8■□□□□ 0.12
LINC01993-201ENST00000374945 NBPF6Q5VWK0 638 aa15.8■□□□□ 0.12
LINC01993-201ENST00000374945 PIBF1Q8WXW3 757 aa15.8■□□□□ 0.12
LINC01993-201ENST00000374945 PRIMPOLQ96LW4 560 aa15.8■□□□□ 0.12
LINC01993-201ENST00000374945 NBPF4Q96M43 638 aa15.8■□□□□ 0.12
LINC01993-201ENST00000374945 PTMAP06454 111 aaKnown RBP15.79■□□□□ 0.12
LINC01993-201ENST00000374945 TSPYL4Q9UJ04 414 aa15.79■□□□□ 0.12
LINC01993-201ENST00000374945 ARHGEF10O15013 1369 aa15.79■□□□□ 0.12
LINC01993-201ENST00000374945 CHL1O00533 1208 aa15.79■□□□□ 0.12
LINC01993-201ENST00000374945 ANKRD44Q8N8A2 993 aa15.78■□□□□ 0.12
LINC01993-201ENST00000374945 TMX3Q96JJ7 454 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms