RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 FRAT2O75474 233 aaPredicted RBP22.74■■□□□ 1.23
RXRB-202ENST00000374685 EXOC6BQ9Y2D4 811 aa22.74■■□□□ 1.23
RXRB-202ENST00000374685 C1orf141Q5JVX7 400 aa22.73■■□□□ 1.23
RXRB-202ENST00000374685 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
RXRB-202ENST00000374685 CHRNA2Q15822 529 aa22.73■■□□□ 1.23
RXRB-202ENST00000374685 BTBD11A6QL63 1104 aa22.72■■□□□ 1.23
RXRB-202ENST00000374685 BMP2KLQ5H9B9 411 aa22.72■■□□□ 1.23
RXRB-202ENST00000374685 TMEM94Q12767 1356 aa22.72■■□□□ 1.23
RXRB-202ENST00000374685 PLEKHO1Q53GL0 409 aaPredicted RBP22.72■■□□□ 1.23
RXRB-202ENST00000374685 TSHZ3Q63HK5 1081 aa22.72■■□□□ 1.23
RXRB-202ENST00000374685 TBC1D9Q6ZT07 1266 aa22.72■■□□□ 1.23
RXRB-202ENST00000374685 RPAP2Q8IXW5 612 aaPredicted RBP22.72■■□□□ 1.23
RXRB-202ENST00000374685 CCT4P50991 539 aaKnown RBP22.71■■□□□ 1.23
RXRB-202ENST00000374685 PLEKHM2Q8IWE5 1019 aa22.71■■□□□ 1.23
RXRB-202ENST00000374685 ATP10DQ9P241 1426 aa22.71■■□□□ 1.23
RXRB-202ENST00000374685 NFAT5O94916 1531 aa22.71■■□□□ 1.23
RXRB-202ENST00000374685 CSB-PGBD3P0DP91 1061 aa22.71■■□□□ 1.23
RXRB-202ENST00000374685 GSPT1P15170 499 aaKnown RBP22.7■■□□□ 1.22
RXRB-202ENST00000374685 CHPF2Q9P2E5 772 aa22.7■■□□□ 1.22
RXRB-202ENST00000374685 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
RXRB-202ENST00000374685 RGPD2P0DJD1 1756 aa22.69■■□□□ 1.22
RXRB-202ENST00000374685 GNAI2P04899 355 aa22.69■■□□□ 1.22
RXRB-202ENST00000374685 FAM43AQ8N2R8 423 aa22.69■■□□□ 1.22
RXRB-202ENST00000374685 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
RXRB-202ENST00000374685 PRAMEF22A3QJZ6 481 aa22.67■■□□□ 1.22
RXRB-202ENST00000374685 LRRFIP2Q9Y608 721 aaKnown RBP22.67■■□□□ 1.22
RXRB-202ENST00000374685 PNMA6EA0A0J9YXQ4 647 aa22.67■■□□□ 1.22
RXRB-202ENST00000374685 EIF4A1P60842 406 aaKnown RBP22.67■■□□□ 1.22
RXRB-202ENST00000374685 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
RXRB-202ENST00000374685 HMMRO75330 724 aa22.66■■□□□ 1.22
RXRB-202ENST00000374685 PXDNQ92626 1479 aa22.64■■□□□ 1.22
RXRB-202ENST00000374685 FOXD4L1Q9NU39 408 aa22.64■■□□□ 1.22
RXRB-202ENST00000374685 RNMTO43148 476 aaKnown RBP22.64■■□□□ 1.21
RXRB-202ENST00000374685 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
RXRB-202ENST00000374685 RBM42Q9BTD8 480 aaKnown RBP22.63■■□□□ 1.21
RXRB-202ENST00000374685 PI4KAP2A4QPH2 592 aa22.63■■□□□ 1.21
RXRB-202ENST00000374685 PI4KAP1Q8N8J0 262 aa22.63■■□□□ 1.21
RXRB-202ENST00000374685 RAPGEF4Q8WZA2 1011 aa22.63■■□□□ 1.21
RXRB-202ENST00000374685 CDC45O75419 566 aa22.62■■□□□ 1.21
RXRB-202ENST00000374685 UBTFL1P0CB47 393 aaPredicted RBP22.62■■□□□ 1.21
RXRB-202ENST00000374685 TTC22Q5TAA0 569 aa22.62■■□□□ 1.21
RXRB-202ENST00000374685 HSCBQ8IWL3 235 aa22.62■■□□□ 1.21
RXRB-202ENST00000374685 CEMIPQ8WUJ3 1361 aa22.61■■□□□ 1.21
RXRB-202ENST00000374685 AIMP1Q12904 312 aaKnown RBP22.61■■□□□ 1.21
RXRB-202ENST00000374685 AMOTQ4VCS5 1084 aa22.61■■□□□ 1.21
RXRB-202ENST00000374685 GNAI3P08754 354 aa22.61■■□□□ 1.21
RXRB-202ENST00000374685 USP44Q9H0E7 712 aa22.61■■□□□ 1.21
RXRB-202ENST00000374685 ERBB3P21860 1342 aa22.61■■□□□ 1.21
RXRB-202ENST00000374685 PROSER3Q2NL68 480 aa22.6■■□□□ 1.21
RXRB-202ENST00000374685 GLIPR1L2Q4G1C9 344 aa22.6■■□□□ 1.21
RXRB-202ENST00000374685 IL1RAPL2Q9NP60 686 aa22.6■■□□□ 1.21
RXRB-202ENST00000374685 SDSP20132 328 aa22.59■■□□□ 1.21
RXRB-202ENST00000374685 SRCIN1Q9C0H9 1055 aa22.58■■□□□ 1.21
RXRB-202ENST00000374685 NBPF7P0C2Y1 421 aaPredicted RBP22.58■■□□□ 1.21
RXRB-202ENST00000374685 PIP4K2AP48426 406 aaPredicted RBP22.57■■□□□ 1.2
RXRB-202ENST00000374685 CADPS2Q86UW7 1296 aa22.56■■□□□ 1.2
RXRB-202ENST00000374685 LRRC37A3O60309 1634 aa22.55■■□□□ 1.2
RXRB-202ENST00000374685 HSP90AA1P07900 732 aaKnown RBP22.55■■□□□ 1.2
RXRB-202ENST00000374685 BABAM1Q9NWV8 329 aa22.55■■□□□ 1.2
RXRB-202ENST00000374685 HSP90AB1P08238 724 aaKnown RBP22.55■■□□□ 1.2
RXRB-202ENST00000374685 NFATC2IPQ8NCF5 419 aa22.55■■□□□ 1.2
RXRB-202ENST00000374685 DNAAF4Q8WXU2 420 aa22.55■■□□□ 1.2
RXRB-202ENST00000374685 LRRCC1Q9C099 1032 aa22.55■■□□□ 1.2
RXRB-202ENST00000374685 MST1RQ04912 1400 aa22.55■■□□□ 1.2
RXRB-202ENST00000374685 CD2BP2O95400 341 aaKnown RBP22.54■■□□□ 1.2
RXRB-202ENST00000374685 USP54Q70EL1 1684 aa22.54■■□□□ 1.2
RXRB-202ENST00000374685 MYL6BP14649 208 aa22.54■■□□□ 1.2
RXRB-202ENST00000374685 RBM25P49756 843 aaKnown RBP22.54■■□□□ 1.2
RXRB-202ENST00000374685 RILPL2Q969X0 211 aa22.54■■□□□ 1.2
RXRB-202ENST00000374685 TRIM6-TRIM34B2RNG4 842 aa22.53■■□□□ 1.2
RXRB-202ENST00000374685 SURF6O75683 361 aaKnown RBP22.53■■□□□ 1.2
RXRB-202ENST00000374685 ATP8B2P98198 1209 aa22.53■■□□□ 1.2
RXRB-202ENST00000374685 PPP1R42Q7Z4L9 355 aa22.53■■□□□ 1.2
RXRB-202ENST00000374685 NPHP3Q7Z494 1330 aa22.53■■□□□ 1.2
RXRB-202ENST00000374685 SRGAP3O43295 1099 aa22.53■■□□□ 1.2
RXRB-202ENST00000374685 TATP17735 454 aaPredicted RBP22.53■■□□□ 1.2
RXRB-202ENST00000374685 PDE1AP54750 535 aa22.53■■□□□ 1.2
RXRB-202ENST00000374685 ANTXR1Q9H6X2 564 aa22.53■■□□□ 1.2
RXRB-202ENST00000374685 GIGYF1O75420 1035 aaPredicted RBP22.53■■□□□ 1.2
RXRB-202ENST00000374685 CWF19L2Q2TBE0 894 aaKnown RBP22.53■■□□□ 1.2
RXRB-202ENST00000374685 MAP3K2Q9Y2U5 619 aa22.53■■□□□ 1.2
RXRB-202ENST00000374685 RGPD5Q99666 1765 aa22.52■■□□□ 1.2
RXRB-202ENST00000374685 NUTM1Q86Y26 1132 aa22.52■■□□□ 1.2
RXRB-202ENST00000374685 MAP4K4O95819 1239 aaPredicted RBP22.52■■□□□ 1.2
RXRB-202ENST00000374685 FAM208AQ9UK61 1670 aaKnown RBP22.52■■□□□ 1.2
RXRB-202ENST00000374685 DBF4Q9UBU7 674 aaPredicted RBP22.51■■□□□ 1.19
RXRB-202ENST00000374685 KIF2CQ99661 725 aa22.51■■□□□ 1.19
RXRB-202ENST00000374685 SLIT3O75094 1523 aa22.5■■□□□ 1.19
RXRB-202ENST00000374685 C9orf78Q9NZ63 289 aaPredicted RBP22.5■■□□□ 1.19
RXRB-202ENST00000374685 ARXQ96QS3 562 aa22.49■■□□□ 1.19
RXRB-202ENST00000374685 OS9Q13438 667 aaPredicted RBP22.49■■□□□ 1.19
RXRB-202ENST00000374685 CASC1Q6TDU7 716 aa22.49■■□□□ 1.19
RXRB-202ENST00000374685 BEND3Q5T5X7 828 aa22.49■■□□□ 1.19
RXRB-202ENST00000374685 MED1Q15648 1581 aaPredicted RBP22.48■■□□□ 1.19
RXRB-202ENST00000374685 MX1P20591 662 aa22.48■■□□□ 1.19
RXRB-202ENST00000374685 ZNF335Q9H4Z2 1342 aaPredicted RBP22.47■■□□□ 1.19
RXRB-202ENST00000374685 PRDM11Q9NQV5 511 aa22.47■■□□□ 1.19
RXRB-202ENST00000374685 STRCP1A6NGW2 1772 aa22.47■■□□□ 1.19
RXRB-202ENST00000374685 SOS1Q07889 1333 aaPredicted RBP22.47■■□□□ 1.19
RXRB-202ENST00000374685 TRPM3Q9HCF6 1732 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms