RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 LRRC4BQ9NT99 713 aa22.99■■□□□ 1.27
PFDN6-201ENST00000374606 QSER1Q2KHR3 1735 aa22.99■■□□□ 1.27
PFDN6-201ENST00000374606 NCBP3Q53F19 620 aaKnown RBP22.98■■□□□ 1.27
PFDN6-201ENST00000374606 POLD1P28340 1107 aa22.97■■□□□ 1.27
PFDN6-201ENST00000374606 RIPK4P57078 832 aa22.97■■□□□ 1.27
PFDN6-201ENST00000374606 MTHFSDQ2M296 383 aaKnown RBP22.97■■□□□ 1.27
PFDN6-201ENST00000374606 AMOTQ4VCS5 1084 aa22.97■■□□□ 1.27
PFDN6-201ENST00000374606 PLEKHO1Q53GL0 409 aaPredicted RBP22.97■■□□□ 1.27
PFDN6-201ENST00000374606 KLHL34Q8N239 644 aa22.97■■□□□ 1.27
PFDN6-201ENST00000374606 LMOD3Q0VAK6 560 aa22.96■■□□□ 1.27
PFDN6-201ENST00000374606 CCDC27Q2M243 656 aa22.96■■□□□ 1.27
PFDN6-201ENST00000374606 SLC27A3Q5K4L6 730 aa22.96■■□□□ 1.27
PFDN6-201ENST00000374606 AKT1S1Q96B36 256 aa22.96■■□□□ 1.27
PFDN6-201ENST00000374606 COL24A1Q17RW2 1714 aa22.95■■□□□ 1.26
PFDN6-201ENST00000374606 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
PFDN6-201ENST00000374606 ZNF521Q96K83 1311 aa22.93■■□□□ 1.26
PFDN6-201ENST00000374606 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
PFDN6-201ENST00000374606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.264e-8■■□□□ 13.1
PFDN6-201ENST00000374606 SPG7Q9UQ90 795 aa22.93■■□□□ 1.26
PFDN6-201ENST00000374606 PNPLA7Q6ZV29 1317 aa22.92■■□□□ 1.26
PFDN6-201ENST00000374606 SHANK3Q9BYB0 1731 aa22.92■■□□□ 1.26
PFDN6-201ENST00000374606 PELP1Q8IZL8 1130 aaKnown RBP22.92■■□□□ 1.26
PFDN6-201ENST00000374606 WWC1Q8IX03 1113 aa22.91■■□□□ 1.26
PFDN6-201ENST00000374606 TRIM35Q9UPQ4 493 aa22.91■■□□□ 1.26
PFDN6-201ENST00000374606 TUBGCP6Q96RT7 1819 aa22.91■■□□□ 1.26
PFDN6-201ENST00000374606 C1orf141Q5JVX7 400 aa22.9■■□□□ 1.26
PFDN6-201ENST00000374606 DDX54Q8TDD1 881 aaKnown RBP22.9■■□□□ 1.26
PFDN6-201ENST00000374606 GNAT3A8MTJ3 354 aa22.89■■□□□ 1.25
PFDN6-201ENST00000374606 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
PFDN6-201ENST00000374606 TFCP2L1Q9NZI6 479 aa22.89■■□□□ 1.25
PFDN6-201ENST00000374606 PCDH11XQ9BZA7 1347 aa22.88■■□□□ 1.25
PFDN6-201ENST00000374606 PCDH11YQ9BZA8 1340 aa22.88■■□□□ 1.25
PFDN6-201ENST00000374606 VIRMAQ69YN4 1812 aaKnown RBP22.88■■□□□ 1.25
PFDN6-201ENST00000374606 AKAP4Q5JQC9 854 aa22.88■■□□□ 1.25
PFDN6-201ENST00000374606 WDR63Q8IWG1 891 aa22.87■■□□□ 1.25
PFDN6-201ENST00000374606 ZCRB1Q8TBF4 217 aaKnown RBP22.87■■□□□ 1.25
PFDN6-201ENST00000374606 LY75O60449 1722 aa22.86■■□□□ 1.25
PFDN6-201ENST00000374606 DOT1LQ8TEK3 1739 aa22.86■■□□□ 1.25
PFDN6-201ENST00000374606 HTATSF1O43719 755 aaKnown RBP22.86■■□□□ 1.25
PFDN6-201ENST00000374606 CENPBP07199 599 aaPredicted RBP22.86■■□□□ 1.25
PFDN6-201ENST00000374606 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
PFDN6-201ENST00000374606 GOLGA2Q08379 1002 aa22.86■■□□□ 1.25
PFDN6-201ENST00000374606 NLGN2Q8NFZ4 835 aa22.86■■□□□ 1.25
PFDN6-201ENST00000374606 SYTL4Q96C24 671 aaPredicted RBP22.86■■□□□ 1.25
PFDN6-201ENST00000374606 ADAMTS7Q9UKP4 1686 aa22.85■■□□□ 1.25
PFDN6-201ENST00000374606 PRIM1P49642 420 aaKnown RBP22.84■■□□□ 1.25
PFDN6-201ENST00000374606 KCNQ4P56696 695 aa22.84■■□□□ 1.25
PFDN6-201ENST00000374606 MCM10Q7L590 875 aa22.84■■□□□ 1.25
PFDN6-201ENST00000374606 IFNL2Q8IZJ0 200 aa22.84■■□□□ 1.25
PFDN6-201ENST00000374606 THUMPD2Q9BTF0 503 aaKnown RBP22.84■■□□□ 1.25
PFDN6-201ENST00000374606 SCN11AQ9UI33 1791 aa22.84■■□□□ 1.25
PFDN6-201ENST00000374606 PHKG2P15735 406 aa22.83■■□□□ 1.25
PFDN6-201ENST00000374606 DCTN1Q14203 1278 aa22.83■■□□□ 1.25
PFDN6-201ENST00000374606 GOLGB1Q14789 3259 aaKnown RBP22.83■■□□□ 1.25
PFDN6-201ENST00000374606 IL16Q14005 1332 aa22.82■■□□□ 1.24
PFDN6-201ENST00000374606 CYP27B1O15528 508 aa22.82■■□□□ 1.24
PFDN6-201ENST00000374606 GRIN3BO60391 1043 aa22.82■■□□□ 1.24
PFDN6-201ENST00000374606 E9PSI1 815 aa22.81■■□□□ 1.24
PFDN6-201ENST00000374606 HSP90AB1P08238 724 aaKnown RBP22.81■■□□□ 1.24
PFDN6-201ENST00000374606 CDCA7LQ96GN5 454 aa22.81■■□□□ 1.24
PFDN6-201ENST00000374606 IFFO2Q5TF58 517 aa22.8■■□□□ 1.24
PFDN6-201ENST00000374606 CCNL1Q9UK58 526 aaPredicted RBP22.8■■□□□ 1.24
PFDN6-201ENST00000374606 KDM6AO15550 1401 aaPredicted RBP22.8■■□□□ 1.24
PFDN6-201ENST00000374606 CEMIPQ8WUJ3 1361 aa22.79■■□□□ 1.24
PFDN6-201ENST00000374606 YBX3P16989 372 aaKnown RBP eCLIP22.79■■□□□ 1.24
PFDN6-201ENST00000374606 SLFN5Q08AF3 891 aa22.79■■□□□ 1.24
PFDN6-201ENST00000374606 MPRIPQ6WCQ1 1025 aa22.79■■□□□ 1.24
PFDN6-201ENST00000374606 MSH5O43196 834 aa22.78■■□□□ 1.24
PFDN6-201ENST00000374606 IL17REQ8NFR9 667 aa22.78■■□□□ 1.24
PFDN6-201ENST00000374606 RNMTO43148 476 aaKnown RBP22.77■■□□□ 1.24
PFDN6-201ENST00000374606 DCAF5Q96JK2 942 aa22.77■■□□□ 1.24
PFDN6-201ENST00000374606 MYH16Q9H6N6 1097 aa22.77■■□□□ 1.24
PFDN6-201ENST00000374606 MRC1P22897 1456 aa22.77■■□□□ 1.24
PFDN6-201ENST00000374606 SIPA1L3O60292 1781 aaPredicted RBP22.76■■□□□ 1.23
PFDN6-201ENST00000374606 GNAI1P63096 354 aa22.76■■□□□ 1.23
PFDN6-201ENST00000374606 SPINK5Q9NQ38 1064 aaPredicted RBP22.76■■□□□ 1.23
PFDN6-201ENST00000374606 IFT57Q9NWB7 429 aa22.76■■□□□ 1.23
PFDN6-201ENST00000374606 TOGARAM1Q9Y4F4 1720 aa22.75■■□□□ 1.23
PFDN6-201ENST00000374606 COL23A1Q86Y22 540 aaPredicted RBP22.75■■□□□ 1.23
PFDN6-201ENST00000374606 LGR6Q9HBX8 967 aa22.75■■□□□ 1.23
PFDN6-201ENST00000374606 LAS1LQ9Y4W2 734 aaKnown RBP22.75■■□□□ 1.23
PFDN6-201ENST00000374606 ATP10DQ9P241 1426 aa22.74■■□□□ 1.23
PFDN6-201ENST00000374606 TEFQ10587 303 aa22.74■■□□□ 1.23
PFDN6-201ENST00000374606 NKX1-1Q15270 411 aaPredicted RBP22.74■■□□□ 1.23
PFDN6-201ENST00000374606 CFAP44Q96MT7 982 aa22.74■■□□□ 1.23
PFDN6-201ENST00000374606 DUSP27Q5VZP5 1158 aa22.73■■□□□ 1.23
PFDN6-201ENST00000374606 MSL1Q68DK7 614 aa22.73■■□□□ 1.23
PFDN6-201ENST00000374606 FANCIQ9NVI1 1328 aa22.73■■□□□ 1.23
PFDN6-201ENST00000374606 TRMT2AQ8IZ69 625 aaKnown RBP22.72■■□□□ 1.23
PFDN6-201ENST00000374606 CEP350Q5VT06 3117 aa22.72■■□□□ 1.23
PFDN6-201ENST00000374606 KDM3BQ7LBC6 1761 aa22.71■■□□□ 1.23
PFDN6-201ENST00000374606 ZNF853P0CG23 659 aa22.71■■□□□ 1.23
PFDN6-201ENST00000374606 TSR2Q969E8 191 aaKnown RBP22.71■■□□□ 1.23
PFDN6-201ENST00000374606 C5P01031 1676 aa22.71■■□□□ 1.23
PFDN6-201ENST00000374606 TAF7Q15545 349 aaPredicted RBP22.7■■□□□ 1.22
PFDN6-201ENST00000374606 HMGB2P26583 209 aaKnown RBP22.69■■□□□ 1.22
PFDN6-201ENST00000374606 SLC52A2Q9HAB3 445 aa22.69■■□□□ 1.22
PFDN6-201ENST00000374606 MBIPQ9NS73 344 aa22.69■■□□□ 1.22
PFDN6-201ENST00000374606 TSPYL4Q9UJ04 414 aa22.69■■□□□ 1.22
PFDN6-201ENST00000374606 CD2APQ9Y5K6 639 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms