RNA–Protein interactions for RNA: ENST00000374264.6

SUSD1-203, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUSD1, Length 2,754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-203ENST00000374264 EIF4A1P60842 406 aaKnown RBP25.44■■□□□ 1.66
SUSD1-203ENST00000374264 RNMTO43148 476 aaKnown RBP25.42■■□□□ 1.66
SUSD1-203ENST00000374264 ANKRD44Q8N8A2 993 aa25.42■■□□□ 1.66
SUSD1-203ENST00000374264 RAPGEF4Q8WZA2 1011 aa25.42■■□□□ 1.66
SUSD1-203ENST00000374264 EXOC6BQ9Y2D4 811 aa25.42■■□□□ 1.66
SUSD1-203ENST00000374264 NPHP3Q7Z494 1330 aa25.41■■□□□ 1.66
SUSD1-203ENST00000374264 SLKQ9H2G2 1235 aaPredicted RBP25.4■■□□□ 1.66
SUSD1-203ENST00000374264 DCTPP1Q9H773 170 aa25.4■■□□□ 1.66
SUSD1-203ENST00000374264 BRINP3Q76B58 766 aa25.39■■□□□ 1.66
SUSD1-203ENST00000374264 CEMIPQ8WUJ3 1361 aa25.39■■□□□ 1.66
SUSD1-203ENST00000374264 TSHZ3Q63HK5 1081 aa25.39■■□□□ 1.66
SUSD1-203ENST00000374264 AMOTQ4VCS5 1084 aa25.39■■□□□ 1.65
SUSD1-203ENST00000374264 CCT4P50991 539 aaKnown RBP25.38■■□□□ 1.65
SUSD1-203ENST00000374264 TBC1D32Q96NH3 1257 aa25.38■■□□□ 1.65
SUSD1-203ENST00000374264 ATP10DQ9P241 1426 aa25.38■■□□□ 1.65
SUSD1-203ENST00000374264 PIP4K2AP48426 406 aaPredicted RBP25.38■■□□□ 1.65
SUSD1-203ENST00000374264 PROSER3Q2NL68 480 aa25.38■■□□□ 1.65
SUSD1-203ENST00000374264 C22orf23Q9BZE7 217 aa25.38■■□□□ 1.65
SUSD1-203ENST00000374264 PNMA6EA0A0J9YXQ4 647 aa25.37■■□□□ 1.65
SUSD1-203ENST00000374264 PI4KAP2A4QPH2 592 aa25.37■■□□□ 1.65
SUSD1-203ENST00000374264 PI4KAP1Q8N8J0 262 aa25.37■■□□□ 1.65
SUSD1-203ENST00000374264 LRRFIP2Q9Y608 721 aaKnown RBP25.37■■□□□ 1.65
SUSD1-203ENST00000374264 MED1Q15648 1581 aaPredicted RBP25.36■■□□□ 1.65
SUSD1-203ENST00000374264 AIMP1Q12904 312 aaKnown RBP25.36■■□□□ 1.65
SUSD1-203ENST00000374264 NFATC2IPQ8NCF5 419 aa25.36■■□□□ 1.65
SUSD1-203ENST00000374264 USP54Q70EL1 1684 aa25.36■■□□□ 1.65
SUSD1-203ENST00000374264 RPAP2Q8IXW5 612 aaPredicted RBP25.36■■□□□ 1.65
SUSD1-203ENST00000374264 USP35Q9P2H5 1018 aa25.35■■□□□ 1.65
SUSD1-203ENST00000374264 TRPM3Q9HCF6 1732 aaPredicted RBP25.35■■□□□ 1.65
SUSD1-203ENST00000374264 GNAI2P04899 355 aa25.34■■□□□ 1.65
SUSD1-203ENST00000374264 PLEKHM2Q8IWE5 1019 aa25.34■■□□□ 1.65
SUSD1-203ENST00000374264 VIRMAQ69YN4 1812 aaKnown RBP25.34■■□□□ 1.65
SUSD1-203ENST00000374264 SLAIN2Q9P270 581 aa25.34■■□□□ 1.65
SUSD1-203ENST00000374264 SLIT3O75094 1523 aa25.33■■□□□ 1.65
SUSD1-203ENST00000374264 GSPT1P15170 499 aaKnown RBP25.33■■□□□ 1.65
SUSD1-203ENST00000374264 RTL5Q5HYW3 569 aaPredicted RBP25.33■■□□□ 1.65
SUSD1-203ENST00000374264 USP44Q9H0E7 712 aa25.33■■□□□ 1.64
SUSD1-203ENST00000374264 TATP17735 454 aaPredicted RBP25.32■■□□□ 1.64
SUSD1-203ENST00000374264 PRDM11Q9NQV5 511 aa25.32■■□□□ 1.64
SUSD1-203ENST00000374264 SPATA31A3Q5VYP0 1347 aa25.32■■□□□ 1.64
SUSD1-203ENST00000374264 STRN4Q9NRL3 753 aa25.31■■□□□ 1.64
SUSD1-203ENST00000374264 NBPF7P0C2Y1 421 aaPredicted RBP25.31■■□□□ 1.64
SUSD1-203ENST00000374264 BMP2KLQ5H9B9 411 aa25.31■■□□□ 1.64
SUSD1-203ENST00000374264 TBC1D9Q6ZT07 1266 aa25.31■■□□□ 1.64
SUSD1-203ENST00000374264 MYL6BP14649 208 aa25.3■■□□□ 1.64
SUSD1-203ENST00000374264 LRRC37A3O60309 1634 aa25.29■■□□□ 1.64
SUSD1-203ENST00000374264 GIGYF1O75420 1035 aaPredicted RBP25.29■■□□□ 1.64
SUSD1-203ENST00000374264 UBTFL1P0CB47 393 aaPredicted RBP25.29■■□□□ 1.64
SUSD1-203ENST00000374264 TBC1D2Q9BYX2 928 aa25.28■■□□□ 1.64
SUSD1-203ENST00000374264 HMMRO75330 724 aa25.27■■□□□ 1.64
SUSD1-203ENST00000374264 TOM1L2Q6ZVM7 507 aa25.27■■□□□ 1.64
SUSD1-203ENST00000374264 SRCIN1Q9C0H9 1055 aa25.27■■□□□ 1.64
SUSD1-203ENST00000374264 IL1RAPL2Q9NP60 686 aa25.27■■□□□ 1.64
SUSD1-203ENST00000374264 BABAM1Q9NWV8 329 aa25.27■■□□□ 1.64
SUSD1-203ENST00000374264 CYP27B1O15528 508 aa25.26■■□□□ 1.63
SUSD1-203ENST00000374264 TNS3Q68CZ2 1445 aa25.26■■□□□ 1.63
SUSD1-203ENST00000374264 CWF19L2Q2TBE0 894 aaKnown RBP25.26■■□□□ 1.63
SUSD1-203ENST00000374264 GNAI3P08754 354 aa25.25■■□□□ 1.63
SUSD1-203ENST00000374264 PHKG2P15735 406 aa25.25■■□□□ 1.63
SUSD1-203ENST00000374264 MEGF6O75095 1541 aa25.25■■□□□ 1.63
SUSD1-203ENST00000374264 DNAAF4Q8WXU2 420 aa25.25■■□□□ 1.63
SUSD1-203ENST00000374264 MAP3K2Q9Y2U5 619 aa25.25■■□□□ 1.63
SUSD1-203ENST00000374264 KIF1AQ12756 1690 aa25.24■■□□□ 1.63
SUSD1-203ENST00000374264 BECN1Q14457 450 aa25.24■■□□□ 1.63
SUSD1-203ENST00000374264 LMTK3Q96Q04 1460 aa25.24■■□□□ 1.63
SUSD1-203ENST00000374264 ALS2Q96Q42 1657 aa25.24■■□□□ 1.63
SUSD1-203ENST00000374264 KAT6BQ8WYB5 2073 aa25.23■■□□□ 1.63
SUSD1-203ENST00000374264 ZNF790Q6PG37 636 aa25.23■■□□□ 1.63
SUSD1-203ENST00000374264 DBF4Q9UBU7 674 aaPredicted RBP25.23■■□□□ 1.63
SUSD1-203ENST00000374264 SPG7Q9UQ90 795 aa25.23■■□□□ 1.63
SUSD1-203ENST00000374264 DDX54Q8TDD1 881 aaKnown RBP25.22■■□□□ 1.63
SUSD1-203ENST00000374264 RBM42Q9BTD8 480 aaKnown RBP25.22■■□□□ 1.63
SUSD1-203ENST00000374264 NFKBIBQ15653 356 aa25.22■■□□□ 1.63
SUSD1-203ENST00000374264 TTC22Q5TAA0 569 aa25.22■■□□□ 1.63
SUSD1-203ENST00000374264 ZNF496Q96IT1 587 aaPredicted RBP25.22■■□□□ 1.63
SUSD1-203ENST00000374264 FAM208AQ9UK61 1670 aaKnown RBP25.22■■□□□ 1.63
SUSD1-203ENST00000374264 PPP1R42Q7Z4L9 355 aa25.22■■□□□ 1.63
SUSD1-203ENST00000374264 JARID2Q92833 1246 aaPredicted RBP25.22■■□□□ 1.63
SUSD1-203ENST00000374264 SDSP20132 328 aa25.21■■□□□ 1.63
SUSD1-203ENST00000374264 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
SUSD1-203ENST00000374264 SLC52A2Q9HAB3 445 aa25.21■■□□□ 1.63
SUSD1-203ENST00000374264 ATP8B2P98198 1209 aa25.2■■□□□ 1.62
SUSD1-203ENST00000374264 SRGAP3O43295 1099 aa25.2■■□□□ 1.62
SUSD1-203ENST00000374264 BEND3Q5T5X7 828 aa25.2■■□□□ 1.62
SUSD1-203ENST00000374264 USP16Q9Y5T5 823 aa25.2■■□□□ 1.62
SUSD1-203ENST00000374264 FRAT2O75474 233 aaPredicted RBP25.19■■□□□ 1.62
SUSD1-203ENST00000374264 SURF6O75683 361 aaKnown RBP25.19■■□□□ 1.62
SUSD1-203ENST00000374264 DCCP43146 1447 aa25.18■■□□□ 1.62
SUSD1-203ENST00000374264 KDM6AO15550 1401 aaPredicted RBP25.18■■□□□ 1.62
SUSD1-203ENST00000374264 ADCY9O60503 1353 aa25.18■■□□□ 1.62
SUSD1-203ENST00000374264 NUTM1Q86Y26 1132 aa25.18■■□□□ 1.62
SUSD1-203ENST00000374264 FOXD4L1Q9NU39 408 aa25.18■■□□□ 1.62
SUSD1-203ENST00000374264 C9orf78Q9NZ63 289 aaPredicted RBP25.18■■□□□ 1.62
SUSD1-203ENST00000374264 LRRCC1Q9C099 1032 aa25.17■■□□□ 1.62
SUSD1-203ENST00000374264 PHRF1Q9P1Y6 1649 aaKnown RBP25.17■■□□□ 1.62
SUSD1-203ENST00000374264 STRCQ7RTU9 1775 aa25.17■■□□□ 1.62
SUSD1-203ENST00000374264 CDC45O75419 566 aa25.17■■□□□ 1.62
SUSD1-203ENST00000374264 XIRP1Q702N8 1843 aaKnown RBP25.17■■□□□ 1.62
SUSD1-203ENST00000374264 MAP4K4O95819 1239 aaPredicted RBP25.16■■□□□ 1.62
SUSD1-203ENST00000374264 EVA1CP58658 441 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms