RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 UPF3BQ9BZI7 483 aaKnown RBP16.67■□□□□ 0.26
LMX1B-202ENST00000373474 SSFA2P28290 1259 aa16.66■□□□□ 0.26
LMX1B-202ENST00000373474 UGGT2Q9NYU1 1516 aa16.66■□□□□ 0.26
LMX1B-202ENST00000373474 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
LMX1B-202ENST00000373474 CCDC83Q8IWF9 413 aa16.66■□□□□ 0.26
LMX1B-202ENST00000373474 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
LMX1B-202ENST00000373474 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
LMX1B-202ENST00000373474 PTPRCP08575 1304 aa16.66■□□□□ 0.26
LMX1B-202ENST00000373474 STIM1Q13586 685 aa16.66■□□□□ 0.26
LMX1B-202ENST00000373474 IGHDP01880 384 aa16.65■□□□□ 0.26
LMX1B-202ENST00000373474 ENOX2Q16206 610 aaKnown RBP16.65■□□□□ 0.26
LMX1B-202ENST00000373474 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
LMX1B-202ENST00000373474 SH2B1Q9NRF2 756 aaPredicted RBP16.65■□□□□ 0.26
LMX1B-202ENST00000373474 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
LMX1B-202ENST00000373474 ADGRL1O94910 1474 aa16.65■□□□□ 0.26
LMX1B-202ENST00000373474 PRPF40BQ6NWY9 871 aaKnown RBP16.64■□□□□ 0.26
LMX1B-202ENST00000373474 ITSN2Q9NZM3 1697 aa16.64■□□□□ 0.26
LMX1B-202ENST00000373474 TBC1D32Q96NH3 1257 aa16.64■□□□□ 0.25
LMX1B-202ENST00000373474 CCAR1Q8IX12 1150 aaKnown RBP16.64■□□□□ 0.25
LMX1B-202ENST00000373474 WASF1Q92558 559 aa16.64■□□□□ 0.25
LMX1B-202ENST00000373474 IL16Q14005 1332 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 CAMK4Q16566 473 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 BMP2KLQ5H9B9 411 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 PDCL3Q9H2J4 239 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 IMMTQ16891 758 aaKnown RBP16.63■□□□□ 0.25
LMX1B-202ENST00000373474 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 CENPHQ9H3R5 247 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 ASXL1Q8IXJ9 1541 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 MEX3CQ5U5Q3 659 aaKnown RBP16.63■□□□□ 0.25
LMX1B-202ENST00000373474 DDX11Q96FC9 970 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 TMCO3Q6UWJ1 677 aa16.63■□□□□ 0.25
LMX1B-202ENST00000373474 CCDC102AQ96A19 550 aa16.62■□□□□ 0.25
LMX1B-202ENST00000373474 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
LMX1B-202ENST00000373474 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
LMX1B-202ENST00000373474 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
LMX1B-202ENST00000373474 NOS1P29475 1434 aa16.62■□□□□ 0.25
LMX1B-202ENST00000373474 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.62■□□□□ 0.25
LMX1B-202ENST00000373474 SYCP1Q15431 976 aa16.62■□□□□ 0.25
LMX1B-202ENST00000373474 TAF7Q15545 349 aaPredicted RBP16.62■□□□□ 0.25
LMX1B-202ENST00000373474 STRN4Q9NRL3 753 aa16.62■□□□□ 0.25
LMX1B-202ENST00000373474 NME9Q86XW9 330 aa16.62■□□□□ 0.25
LMX1B-202ENST00000373474 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
LMX1B-202ENST00000373474 KRT18P05783 430 aaKnown RBP16.61■□□□□ 0.25
LMX1B-202ENST00000373474 TOM1L2Q6ZVM7 507 aa16.61■□□□□ 0.25
LMX1B-202ENST00000373474 UBXN4Q92575 508 aa16.61■□□□□ 0.25
LMX1B-202ENST00000373474 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
LMX1B-202ENST00000373474 SLC26A8Q96RN1 970 aa16.61■□□□□ 0.25
LMX1B-202ENST00000373474 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
LMX1B-202ENST00000373474 KCNH5Q8NCM2 988 aa16.6■□□□□ 0.25
LMX1B-202ENST00000373474 ANKRD36BQ8N2N9 1353 aa16.6■□□□□ 0.25
LMX1B-202ENST00000373474 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
LMX1B-202ENST00000373474 FILIP1Q7Z7B0 1213 aa16.6■□□□□ 0.25
LMX1B-202ENST00000373474 CGNQ9P2M7 1197 aaKnown RBP16.6■□□□□ 0.25
LMX1B-202ENST00000373474 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
LMX1B-202ENST00000373474 MICALCLQ6ZW33 695 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
LMX1B-202ENST00000373474 MPHOSPH8Q99549 860 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 CEP131Q9UPN4 1083 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 LIMCH1Q9UPQ0 1083 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
LMX1B-202ENST00000373474 PTPRKQ15262 1439 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 MCM3P25205 808 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 HDAC1Q13547 482 aaPredicted RBP16.59■□□□□ 0.25
LMX1B-202ENST00000373474 TDO2P48775 406 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 DDX54Q8TDD1 881 aaKnown RBP16.59■□□□□ 0.25
LMX1B-202ENST00000373474 UBAC1Q9BSL1 405 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 CFAP43Q8NDM7 1665 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 CTTNBP2Q8WZ74 1663 aa16.59■□□□□ 0.25
LMX1B-202ENST00000373474 ANO10Q9NW15 660 aa16.58■□□□□ 0.25
LMX1B-202ENST00000373474 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.25
LMX1B-202ENST00000373474 ANKRD62A6NC57 917 aa16.58■□□□□ 0.25
LMX1B-202ENST00000373474 TTC22Q5TAA0 569 aa16.58■□□□□ 0.25
LMX1B-202ENST00000373474 LARP1Q6PKG0 1096 aaKnown RBP16.58■□□□□ 0.25
LMX1B-202ENST00000373474 NUCB1Q02818 461 aa16.58■□□□□ 0.24
LMX1B-202ENST00000373474 EIF2AK4Q9P2K8 1649 aaKnown RBP16.58■□□□□ 0.24
LMX1B-202ENST00000373474 GPATCH8Q9UKJ3 1502 aaKnown RBP16.58■□□□□ 0.24
LMX1B-202ENST00000373474 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
LMX1B-202ENST00000373474 F6X3S4 739 aa16.58■□□□□ 0.24
LMX1B-202ENST00000373474 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.24
LMX1B-202ENST00000373474 NUP160Q12769 1436 aa16.58■□□□□ 0.24
LMX1B-202ENST00000373474 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
LMX1B-202ENST00000373474 MAP9Q49MG5 647 aa16.57■□□□□ 0.24
LMX1B-202ENST00000373474 TAX1BP1Q86VP1 789 aa16.57■□□□□ 0.24
LMX1B-202ENST00000373474 UBE2Q2Q8WVN8 375 aa16.57■□□□□ 0.24
LMX1B-202ENST00000373474 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
LMX1B-202ENST00000373474 POGZQ7Z3K3 1410 aa16.57■□□□□ 0.24
LMX1B-202ENST00000373474 C14orf93Q9H972 538 aaKnown RBP16.57■□□□□ 0.24
LMX1B-202ENST00000373474 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
LMX1B-202ENST00000373474 SOGA3Q5TF21 947 aa16.57■□□□□ 0.24
LMX1B-202ENST00000373474 CRACR2AQ9BSW2 395 aa16.57■□□□□ 0.24
LMX1B-202ENST00000373474 GBP2P32456 591 aaPredicted RBP16.56■□□□□ 0.24
LMX1B-202ENST00000373474 WASLO00401 505 aaPredicted RBP16.56■□□□□ 0.24
LMX1B-202ENST00000373474 FAM193AP78312 1265 aa16.56■□□□□ 0.24
LMX1B-202ENST00000373474 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
LMX1B-202ENST00000373474 BOLA2Q9H3K6 86 aa16.56■□□□□ 0.24
LMX1B-202ENST00000373474 PARD3Q8TEW0 1356 aa16.56■□□□□ 0.24
LMX1B-202ENST00000373474 BAG4O95429 457 aaKnown RBP16.56■□□□□ 0.24
LMX1B-202ENST00000373474 CCDC148Q8NFR7 591 aa16.56■□□□□ 0.24
LMX1B-202ENST00000373474 CTAGE5O15320 804 aa16.56■□□□□ 0.24
LMX1B-202ENST00000373474 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms