RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 KNDC1Q76NI1 1749 aa13.37□□□□□ -0.27
GRIK3-202ENST00000373093 TPM2P07951 284 aa13.37□□□□□ -0.27
GRIK3-202ENST00000373093 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
GRIK3-202ENST00000373093 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
GRIK3-202ENST00000373093 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
GRIK3-202ENST00000373093 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
GRIK3-202ENST00000373093 EYA1Q99502 592 aa13.36□□□□□ -0.27
GRIK3-202ENST00000373093 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
GRIK3-202ENST00000373093 ATP10DQ9P241 1426 aa13.36□□□□□ -0.27
GRIK3-202ENST00000373093 RABEP1Q15276 862 aa13.35□□□□□ -0.27
GRIK3-202ENST00000373093 PDCL3Q9H2J4 239 aa13.35□□□□□ -0.27
GRIK3-202ENST00000373093 PHAXQ9H814 394 aaKnown RBP13.35□□□□□ -0.27
GRIK3-202ENST00000373093 PIK3R4Q99570 1358 aa13.35□□□□□ -0.27
GRIK3-202ENST00000373093 PDE1AP54750 535 aa13.35□□□□□ -0.27
GRIK3-202ENST00000373093 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
GRIK3-202ENST00000373093 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
GRIK3-202ENST00000373093 RGS12O14924 1447 aa13.35□□□□□ -0.27
GRIK3-202ENST00000373093 NLRP6P59044 892 aa13.34□□□□□ -0.27
GRIK3-202ENST00000373093 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
GRIK3-202ENST00000373093 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
GRIK3-202ENST00000373093 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
GRIK3-202ENST00000373093 NUCB2P80303 420 aa13.33□□□□□ -0.28
GRIK3-202ENST00000373093 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
GRIK3-202ENST00000373093 RPAP2Q8IXW5 612 aaPredicted RBP13.33□□□□□ -0.28
GRIK3-202ENST00000373093 DLG5Q8TDM6 1919 aa13.33□□□□□ -0.28
GRIK3-202ENST00000373093 GADD45BO75293 160 aaPredicted RBP13.33□□□□□ -0.28
GRIK3-202ENST00000373093 CPA1P15085 419 aa13.32□□□□□ -0.28
GRIK3-202ENST00000373093 ATP7BP35670 1465 aa13.32□□□□□ -0.28
GRIK3-202ENST00000373093 ST18O60284 1047 aa13.32□□□□□ -0.28
GRIK3-202ENST00000373093 ZNF445P59923 1031 aa13.32□□□□□ -0.28
GRIK3-202ENST00000373093 CLTCQ00610 1675 aaKnown RBP13.32□□□□□ -0.28
GRIK3-202ENST00000373093 FLIIQ13045 1269 aa13.32□□□□□ -0.28
GRIK3-202ENST00000373093 TMX3Q96JJ7 454 aa13.31□□□□□ -0.28
GRIK3-202ENST00000373093 NOL7Q9UMY1 257 aaKnown RBP13.31□□□□□ -0.28
GRIK3-202ENST00000373093 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
GRIK3-202ENST00000373093 CDK12Q9NYV4 1490 aaPredicted RBP13.31□□□□□ -0.28
GRIK3-202ENST00000373093 ERC2O15083 957 aa13.31□□□□□ -0.28
GRIK3-202ENST00000373093 KCNQ3O43525 872 aa13.31□□□□□ -0.28
GRIK3-202ENST00000373093 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
GRIK3-202ENST00000373093 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
GRIK3-202ENST00000373093 STK31Q9BXU1 1019 aa13.31□□□□□ -0.28
GRIK3-202ENST00000373093 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
GRIK3-202ENST00000373093 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
GRIK3-202ENST00000373093 ANKRD26Q9UPS8 1709 aa13.3□□□□□ -0.28
GRIK3-202ENST00000373093 GNAI2P04899 355 aa13.29□□□□□ -0.28
GRIK3-202ENST00000373093 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
GRIK3-202ENST00000373093 TTC12Q9H892 705 aaPredicted RBP13.29□□□□□ -0.28
GRIK3-202ENST00000373093 ZKSCAN5Q9Y2L8 839 aa13.29□□□□□ -0.28
GRIK3-202ENST00000373093 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
GRIK3-202ENST00000373093 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
GRIK3-202ENST00000373093 MX1P20591 662 aa13.28□□□□□ -0.28
GRIK3-202ENST00000373093 PTMSP20962 102 aa13.28□□□□□ -0.28
GRIK3-202ENST00000373093 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
GRIK3-202ENST00000373093 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
GRIK3-202ENST00000373093 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
GRIK3-202ENST00000373093 USP25Q9UHP3 1055 aa13.28□□□□□ -0.28
GRIK3-202ENST00000373093 SURF6O75683 361 aaKnown RBP13.28□□□□□ -0.28
GRIK3-202ENST00000373093 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
GRIK3-202ENST00000373093 HMMRO75330 724 aa13.27□□□□□ -0.28
GRIK3-202ENST00000373093 REC8O95072 547 aa13.27□□□□□ -0.28
GRIK3-202ENST00000373093 SPG7Q9UQ90 795 aa13.27□□□□□ -0.28
GRIK3-202ENST00000373093 CHMP3Q9Y3E7 222 aa13.27□□□□□ -0.28
GRIK3-202ENST00000373093 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.27□□□□□ -0.28
GRIK3-202ENST00000373093 CRB1P82279 1406 aa13.27□□□□□ -0.28
GRIK3-202ENST00000373093 NBPF7P0C2Y1 421 aaPredicted RBP13.27□□□□□ -0.29
GRIK3-202ENST00000373093 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
GRIK3-202ENST00000373093 PDLIM2Q96JY6 352 aa13.27□□□□□ -0.29
GRIK3-202ENST00000373093 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.29
GRIK3-202ENST00000373093 ESYT1Q9BSJ8 1104 aa13.26□□□□□ -0.29
GRIK3-202ENST00000373093 USP44Q9H0E7 712 aa13.26□□□□□ -0.29
GRIK3-202ENST00000373093 REREQ9P2R6 1566 aa13.26□□□□□ -0.29
GRIK3-202ENST00000373093 PRAMEF22A3QJZ6 481 aa13.26□□□□□ -0.29
GRIK3-202ENST00000373093 CLEC17AQ6ZS10 378 aa13.26□□□□□ -0.29
GRIK3-202ENST00000373093 LRRC59Q96AG4 307 aaKnown RBP13.26□□□□□ -0.29
GRIK3-202ENST00000373093 PTPRCP08575 1304 aa13.25□□□□□ -0.29
GRIK3-202ENST00000373093 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
GRIK3-202ENST00000373093 IGSF3O75054 1194 aa13.25□□□□□ -0.29
GRIK3-202ENST00000373093 CHMLP26374 656 aa13.25□□□□□ -0.29
GRIK3-202ENST00000373093 COL9A3Q14050 684 aaPredicted RBP13.25□□□□□ -0.29
GRIK3-202ENST00000373093 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
GRIK3-202ENST00000373093 CWC27Q6UX04 472 aaKnown RBP13.25□□□□□ -0.29
GRIK3-202ENST00000373093 PPP1R42Q7Z4L9 355 aa13.25□□□□□ -0.29
GRIK3-202ENST00000373093 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
GRIK3-202ENST00000373093 AGLP35573 1532 aa13.24□□□□□ -0.29
GRIK3-202ENST00000373093 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
GRIK3-202ENST00000373093 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
GRIK3-202ENST00000373093 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
GRIK3-202ENST00000373093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
GRIK3-202ENST00000373093 GNAT3A8MTJ3 354 aa13.23□□□□□ -0.29
GRIK3-202ENST00000373093 SRGAP3O43295 1099 aa13.23□□□□□ -0.29
GRIK3-202ENST00000373093 ZNF500O60304 480 aaPredicted RBP13.23□□□□□ -0.29
GRIK3-202ENST00000373093 UBTFL1P0CB47 393 aaPredicted RBP13.23□□□□□ -0.29
GRIK3-202ENST00000373093 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
GRIK3-202ENST00000373093 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
GRIK3-202ENST00000373093 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
GRIK3-202ENST00000373093 USP48Q86UV5 1035 aa13.23□□□□□ -0.29
GRIK3-202ENST00000373093 CBX1P83916 185 aa13.23□□□□□ -0.29
GRIK3-202ENST00000373093 TSPY26PQ9H489 355 aa13.23□□□□□ -0.29
GRIK3-202ENST00000373093 CHPF2Q9P2E5 772 aa13.23□□□□□ -0.29
GRIK3-202ENST00000373093 TNRQ92752 1358 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms