RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CABLES1Q8TDN4 633 aa24.85■■□□□ 1.57
LHX3-202ENST00000371748 KDM3BQ7LBC6 1761 aa24.85■■□□□ 1.57
LHX3-202ENST00000371748 STRCQ7RTU9 1775 aa24.84■■□□□ 1.57
LHX3-202ENST00000371748 KDM4FA0A1W2PPD8 638 aa24.83■■□□□ 1.57
LHX3-202ENST00000371748 TEFQ10587 303 aa24.83■■□□□ 1.57
LHX3-202ENST00000371748 FKBP5Q13451 457 aaPredicted RBP24.83■■□□□ 1.57
LHX3-202ENST00000371748 NFKBIBQ15653 356 aa24.83■■□□□ 1.57
LHX3-202ENST00000371748 C1orf141Q5JVX7 400 aa24.83■■□□□ 1.57
LHX3-202ENST00000371748 ANKRD44Q8N8A2 993 aa24.83■■□□□ 1.57
LHX3-202ENST00000371748 SOS1Q07889 1333 aaPredicted RBP24.83■■□□□ 1.56
LHX3-202ENST00000371748 LMTK3Q96Q04 1460 aa24.83■■□□□ 1.56
LHX3-202ENST00000371748 KCNQ3O43525 872 aa24.82■■□□□ 1.56
LHX3-202ENST00000371748 CCT4P50991 539 aaKnown RBP24.82■■□□□ 1.56
LHX3-202ENST00000371748 HDGFL1Q5TGJ6 251 aa24.82■■□□□ 1.56
LHX3-202ENST00000371748 CEP85Q6P2H3 762 aa24.82■■□□□ 1.56
LHX3-202ENST00000371748 TNS3Q68CZ2 1445 aa24.81■■□□□ 1.56
LHX3-202ENST00000371748 EIF4A1P60842 406 aaKnown RBP24.81■■□□□ 1.56
LHX3-202ENST00000371748 UPF2Q9HAU5 1272 aaKnown RBP24.81■■□□□ 1.56
LHX3-202ENST00000371748 RNMTO43148 476 aaKnown RBP24.8■■□□□ 1.56
LHX3-202ENST00000371748 RPAP2Q8IXW5 612 aaPredicted RBP24.8■■□□□ 1.56
LHX3-202ENST00000371748 DCTPP1Q9H773 170 aa24.8■■□□□ 1.56
LHX3-202ENST00000371748 BTBD11A6QL63 1104 aa24.8■■□□□ 1.56
LHX3-202ENST00000371748 DAXXQ9UER7 740 aaPredicted RBP24.8■■□□□ 1.56
LHX3-202ENST00000371748 EIF2S2P20042 333 aaKnown RBP24.79■■□□□ 1.56
LHX3-202ENST00000371748 COL18A1P39060 1754 aa24.78■■□□□ 1.56
LHX3-202ENST00000371748 NLRP2Q9NX02 1062 aa24.78■■□□□ 1.56
LHX3-202ENST00000371748 SPATA31A3Q5VYP0 1347 aa24.77■■□□□ 1.56
LHX3-202ENST00000371748 GSE1Q14687 1217 aa24.76■■□□□ 1.55
LHX3-202ENST00000371748 CHRNA2Q15822 529 aa24.76■■□□□ 1.55
LHX3-202ENST00000371748 TBC1D32Q96NH3 1257 aa24.76■■□□□ 1.55
LHX3-202ENST00000371748 PHAXQ9H814 394 aaKnown RBP24.76■■□□□ 1.55
LHX3-202ENST00000371748 CRYBG1Q9Y4K1 1723 aa24.76■■□□□ 1.55
LHX3-202ENST00000371748 BRINP3Q76B58 766 aa24.75■■□□□ 1.55
LHX3-202ENST00000371748 MFAP1P55081 439 aaKnown RBP24.75■■□□□ 1.55
LHX3-202ENST00000371748 ZNF335Q9H4Z2 1342 aaPredicted RBP24.74■■□□□ 1.55
LHX3-202ENST00000371748 RAPGEF4Q8WZA2 1011 aa24.74■■□□□ 1.55
LHX3-202ENST00000371748 BMP2KLQ5H9B9 411 aa24.73■■□□□ 1.55
LHX3-202ENST00000371748 CSB-PGBD3P0DP91 1061 aa24.73■■□□□ 1.55
LHX3-202ENST00000371748 OVOS2A0A0G2JMS6 1433 aa24.72■■□□□ 1.55
LHX3-202ENST00000371748 N4BP2Q86UW6 1770 aaPredicted RBP24.72■■□□□ 1.55
LHX3-202ENST00000371748 RTN4Q9NQC3 1192 aaKnown RBP24.72■■□□□ 1.55
LHX3-202ENST00000371748 CHPF2Q9P2E5 772 aa24.72■■□□□ 1.55
LHX3-202ENST00000371748 HOXB7P09629 217 aa24.72■■□□□ 1.55
LHX3-202ENST00000371748 SIPA1L3O60292 1781 aaPredicted RBP24.71■■□□□ 1.55
LHX3-202ENST00000371748 APBB1O00213 710 aa24.71■■□□□ 1.55
LHX3-202ENST00000371748 GNAI2P04899 355 aa24.71■■□□□ 1.55
LHX3-202ENST00000371748 C16orf71Q8IYS4 520 aaPredicted RBP24.7■■□□□ 1.54
LHX3-202ENST00000371748 MEGF6O75095 1541 aa24.69■■□□□ 1.54
LHX3-202ENST00000371748 ADAMTS7Q9UKP4 1686 aa24.69■■□□□ 1.54
LHX3-202ENST00000371748 TATP17735 454 aaPredicted RBP24.69■■□□□ 1.54
LHX3-202ENST00000371748 PXDNLA1KZ92 1463 aa24.69■■□□□ 1.54
LHX3-202ENST00000371748 ANXA1P04083 346 aa24.68■■□□□ 1.54
LHX3-202ENST00000371748 PLEKHM2Q8IWE5 1019 aa24.68■■□□□ 1.54
LHX3-202ENST00000371748 SMARCA5O60264 1052 aaPredicted RBP24.68■■□□□ 1.54
LHX3-202ENST00000371748 HMMRO75330 724 aa24.68■■□□□ 1.54
LHX3-202ENST00000371748 C22orf23Q9BZE7 217 aa24.68■■□□□ 1.54
LHX3-202ENST00000371748 GNAI3P08754 354 aa24.67■■□□□ 1.54
LHX3-202ENST00000371748 SLAIN2Q9P270 581 aa24.67■■□□□ 1.54
LHX3-202ENST00000371748 ANO8Q9HCE9 1232 aaPredicted RBP24.66■■□□□ 1.54
LHX3-202ENST00000371748 OTUD7AQ8TE49 926 aaPredicted RBP24.66■■□□□ 1.54
LHX3-202ENST00000371748 SCN11AQ9UI33 1791 aa24.66■■□□□ 1.54
LHX3-202ENST00000371748 PRAMEF22A3QJZ6 481 aa24.65■■□□□ 1.54
LHX3-202ENST00000371748 CPDO75976 1380 aa24.65■■□□□ 1.54
LHX3-202ENST00000371748 GIGYF1O75420 1035 aaPredicted RBP24.65■■□□□ 1.54
LHX3-202ENST00000371748 USP44Q9H0E7 712 aa24.65■■□□□ 1.54
LHX3-202ENST00000371748 ABCC6O95255 1503 aa24.65■■□□□ 1.54
LHX3-202ENST00000371748 KDM6AO15550 1401 aaPredicted RBP24.64■■□□□ 1.54
LHX3-202ENST00000371748 GSPT1P15170 499 aaKnown RBP24.64■■□□□ 1.54
LHX3-202ENST00000371748 PHKG2P15735 406 aa24.64■■□□□ 1.54
LHX3-202ENST00000371748 BRPF3Q9ULD4 1205 aa24.64■■□□□ 1.54
LHX3-202ENST00000371748 SPG7Q9UQ90 795 aa24.64■■□□□ 1.54
LHX3-202ENST00000371748 CHMP4AQ9BY43 222 aa24.64■■□□□ 1.53
LHX3-202ENST00000371748 LRRFIP2Q9Y608 721 aaKnown RBP24.64■■□□□ 1.53
LHX3-202ENST00000371748 HEG1Q9ULI3 1381 aa24.63■■□□□ 1.53
LHX3-202ENST00000371748 BECN1Q14457 450 aa24.63■■□□□ 1.53
LHX3-202ENST00000371748 PNMA6EA0A0J9YXQ4 647 aa24.62■■□□□ 1.53
LHX3-202ENST00000371748 PI4KAP2A4QPH2 592 aa24.62■■□□□ 1.53
LHX3-202ENST00000371748 PI4KAP1Q8N8J0 262 aa24.62■■□□□ 1.53
LHX3-202ENST00000371748 FRAT2O75474 233 aaPredicted RBP24.61■■□□□ 1.53
LHX3-202ENST00000371748 SRCIN1Q9C0H9 1055 aa24.61■■□□□ 1.53
LHX3-202ENST00000371748 DBF4Q9UBU7 674 aaPredicted RBP24.61■■□□□ 1.53
LHX3-202ENST00000371748 EXOC6BQ9Y2D4 811 aa24.61■■□□□ 1.53
LHX3-202ENST00000371748 SOS2Q07890 1332 aaPredicted RBP24.61■■□□□ 1.53
LHX3-202ENST00000371748 SLC39A6Q13433 755 aa24.61■■□□□ 1.53
LHX3-202ENST00000371748 TBC1D9Q6ZT07 1266 aa24.61■■□□□ 1.53
LHX3-202ENST00000371748 UBTFL1P0CB47 393 aaPredicted RBP24.6■■□□□ 1.53
LHX3-202ENST00000371748 ATP8B2P98198 1209 aa24.6■■□□□ 1.53
LHX3-202ENST00000371748 PROSER3Q2NL68 480 aa24.6■■□□□ 1.53
LHX3-202ENST00000371748 TTC22Q5TAA0 569 aa24.6■■□□□ 1.53
LHX3-202ENST00000371748 IFNL2Q8IZJ0 200 aa24.6■■□□□ 1.53
LHX3-202ENST00000371748 DNAAF4Q8WXU2 420 aa24.6■■□□□ 1.53
LHX3-202ENST00000371748 SLC52A2Q9HAB3 445 aa24.6■■□□□ 1.53
LHX3-202ENST00000371748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.6■■□□□ 1.53
LHX3-202ENST00000371748 NFATC2IPQ8NCF5 419 aa24.59■■□□□ 1.53
LHX3-202ENST00000371748 PRDM11Q9NQV5 511 aa24.59■■□□□ 1.53
LHX3-202ENST00000371748 ADCY9O60503 1353 aa24.59■■□□□ 1.53
LHX3-202ENST00000371748 PKD1L3Q7Z443 1732 aa24.58■■□□□ 1.53
LHX3-202ENST00000371748 CYP27B1O15528 508 aa24.58■■□□□ 1.52
LHX3-202ENST00000371748 BEND3Q5T5X7 828 aa24.58■■□□□ 1.52
LHX3-202ENST00000371748 ZNF790Q6PG37 636 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms