RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 GCP02774 474 aa35.75■■■■□ 3.31
SSBP3-204ENST00000371320 MCM4P33991 863 aa35.75■■■■□ 3.31
SSBP3-204ENST00000371320 LRRC59Q96AG4 307 aaKnown RBP35.75■■■■□ 3.31
SSBP3-204ENST00000371320 CACNA1FO60840 1977 aa35.74■■■■□ 3.31
SSBP3-204ENST00000371320 DDIT3P35638 169 aa35.74■■■■□ 3.31
SSBP3-204ENST00000371320 XPCQ01831 940 aaPredicted RBP35.74■■■■□ 3.31
SSBP3-204ENST00000371320 ATP8B2P98198 1209 aa35.73■■■■□ 3.31
SSBP3-204ENST00000371320 RBM42Q9BTD8 480 aaKnown RBP35.73■■■■□ 3.31
SSBP3-204ENST00000371320 EXOC6BQ9Y2D4 811 aa35.73■■■■□ 3.31
SSBP3-204ENST00000371320 PHRF1Q9P1Y6 1649 aaKnown RBP35.73■■■■□ 3.31
SSBP3-204ENST00000371320 PXDNLA1KZ92 1463 aa35.72■■■■□ 3.31
SSBP3-204ENST00000371320 OSBPL3Q9H4L5 887 aa35.72■■■■□ 3.31
SSBP3-204ENST00000371320 EIF4A1P60842 406 aaKnown RBP35.72■■■■□ 3.31
SSBP3-204ENST00000371320 PLEKHO1Q53GL0 409 aaPredicted RBP35.72■■■■□ 3.31
SSBP3-204ENST00000371320 ARHGEF25Q86VW2 580 aa35.72■■■■□ 3.31
SSBP3-204ENST00000371320 CD2BP2O95400 341 aaKnown RBP35.71■■■■□ 3.31
SSBP3-204ENST00000371320 AKAP4Q5JQC9 854 aa35.71■■■■□ 3.31
SSBP3-204ENST00000371320 ZNF530Q6P9A1 599 aaPredicted RBP35.71■■■■□ 3.31
SSBP3-204ENST00000371320 K7ELQ4 463 aaPredicted RBP35.7■■■■□ 3.31
SSBP3-204ENST00000371320 PLEKHG5O94827 1062 aa35.7■■■■□ 3.31
SSBP3-204ENST00000371320 PDE1AP54750 535 aa35.7■■■■□ 3.31
SSBP3-204ENST00000371320 LMOD2Q6P5Q4 547 aa35.7■■■■□ 3.31
SSBP3-204ENST00000371320 USP26Q9BXU7 913 aa35.7■■■■□ 3.31
SSBP3-204ENST00000371320 PHAXQ9H814 394 aaKnown RBP35.7■■■■□ 3.31
SSBP3-204ENST00000371320 MED1Q15648 1581 aaPredicted RBP35.7■■■■□ 3.31
SSBP3-204ENST00000371320 PNMA6EA0A0J9YXQ4 647 aa35.69■■■■□ 3.3
SSBP3-204ENST00000371320 LRRCC1Q9C099 1032 aa35.69■■■■□ 3.3
SSBP3-204ENST00000371320 LRRFIP2Q9Y608 721 aaKnown RBP35.69■■■■□ 3.3
SSBP3-204ENST00000371320 HOXB7P09629 217 aa35.68■■■■□ 3.3
SSBP3-204ENST00000371320 EIF2S2P20042 333 aaKnown RBP35.68■■■■□ 3.3
SSBP3-204ENST00000371320 TEFQ10587 303 aa35.68■■■■□ 3.3
SSBP3-204ENST00000371320 CHMP4AQ9BY43 222 aa35.68■■■■□ 3.3
SSBP3-204ENST00000371320 USP44Q9H0E7 712 aa35.68■■■■□ 3.3
SSBP3-204ENST00000371320 CIZ1Q9ULV3 898 aaPredicted RBP35.68■■■■□ 3.3
SSBP3-204ENST00000371320 AMOTQ4VCS5 1084 aa35.68■■■■□ 3.3
SSBP3-204ENST00000371320 HSP90AA1P07900 732 aaKnown RBP35.67■■■■□ 3.3
SSBP3-204ENST00000371320 UBTFL1P0CB47 393 aaPredicted RBP35.66■■■■□ 3.3
SSBP3-204ENST00000371320 SLIT3O75094 1523 aa35.66■■■■□ 3.3
SSBP3-204ENST00000371320 RABEP1Q15276 862 aa35.65■■■■□ 3.3
SSBP3-204ENST00000371320 PROSER2Q86WR7 435 aaPredicted RBP35.65■■■■□ 3.3
SSBP3-204ENST00000371320 RGPD2P0DJD1 1756 aa35.65■■■■□ 3.3
SSBP3-204ENST00000371320 BTBD11A6QL63 1104 aa35.64■■■■□ 3.3
SSBP3-204ENST00000371320 MPRIPQ6WCQ1 1025 aa35.64■■■■□ 3.3
SSBP3-204ENST00000371320 ANKRD24Q8TF21 1146 aa35.64■■■■□ 3.3
SSBP3-204ENST00000371320 N4BP2Q86UW6 1770 aaPredicted RBP35.63■■■■□ 3.29
SSBP3-204ENST00000371320 KRT28Q7Z3Y7 464 aa35.63■■■■□ 3.29
SSBP3-204ENST00000371320 IBTKQ9P2D0 1353 aaPredicted RBP35.62■■■■□ 3.29
SSBP3-204ENST00000371320 KCNQ3O43525 872 aa35.62■■■■□ 3.29
SSBP3-204ENST00000371320 C1orf141Q5JVX7 400 aa35.62■■■■□ 3.29
SSBP3-204ENST00000371320 LMO7Q8WWI1 1683 aa35.62■■■■□ 3.29
SSBP3-204ENST00000371320 REC8O95072 547 aa35.61■■■■□ 3.29
SSBP3-204ENST00000371320 SRCIN1Q9C0H9 1055 aa35.61■■■■□ 3.29
SSBP3-204ENST00000371320 CHPF2Q9P2E5 772 aa35.61■■■■□ 3.29
SSBP3-204ENST00000371320 SALL3Q9BXA9 1300 aa35.61■■■■□ 3.29
SSBP3-204ENST00000371320 KDM3BQ7LBC6 1761 aa35.6■■■■□ 3.29
SSBP3-204ENST00000371320 NCAPD2Q15021 1401 aa35.6■■■■□ 3.29
SSBP3-204ENST00000371320 RNMTO43148 476 aaKnown RBP35.59■■■■□ 3.29
SSBP3-204ENST00000371320 ERC2O15083 957 aa35.58■■■■□ 3.29
SSBP3-204ENST00000371320 MX1P20591 662 aa35.58■■■■□ 3.29
SSBP3-204ENST00000371320 FOXD4L1Q9NU39 408 aa35.58■■■■□ 3.29
SSBP3-204ENST00000371320 DDX11L8A8MPP1 907 aa35.56■■■■□ 3.28
SSBP3-204ENST00000371320 TSHZ3Q63HK5 1081 aa35.56■■■■□ 3.28
SSBP3-204ENST00000371320 RAB3GAP1Q15042 981 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 SSH3Q8TE77 659 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 TNPO1Q92973 898 aaKnown RBP35.55■■■■□ 3.28
SSBP3-204ENST00000371320 BRPF3Q9ULD4 1205 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 AXIN2Q9Y2T1 843 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 C1orf167Q5SNV9 1468 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 PXDNQ92626 1479 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 IL27Q8NEV9 243 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 DNAAF4Q8WXU2 420 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 C19orf44Q9H6X5 657 aa35.55■■■■□ 3.28
SSBP3-204ENST00000371320 TRPM3Q9HCF6 1732 aaPredicted RBP35.53■■■■□ 3.28
SSBP3-204ENST00000371320 PI4KAP2A4QPH2 592 aa35.53■■■■□ 3.28
SSBP3-204ENST00000371320 TRAK2O60296 914 aa35.53■■■■□ 3.28
SSBP3-204ENST00000371320 PI4KAP1Q8N8J0 262 aa35.53■■■■□ 3.28
SSBP3-204ENST00000371320 OVOS2A0A0G2JMS6 1433 aa35.52■■■■□ 3.28
SSBP3-204ENST00000371320 BEND3Q5T5X7 828 aa35.52■■■■□ 3.28
SSBP3-204ENST00000371320 STAP2Q9UGK3 403 aa35.52■■■■□ 3.28
SSBP3-204ENST00000371320 PPP1R42Q7Z4L9 355 aa35.51■■■■□ 3.28
SSBP3-204ENST00000371320 GBP4Q96PP9 640 aa35.5■■■■□ 3.27
SSBP3-204ENST00000371320 DBF4Q9UBU7 674 aaPredicted RBP35.5■■■■□ 3.27
SSBP3-204ENST00000371320 KIF1AQ12756 1690 aa35.5■■■■□ 3.27
SSBP3-204ENST00000371320 ANXA1P04083 346 aa35.49■■■■□ 3.27
SSBP3-204ENST00000371320 RAB11FIP3O75154 756 aa35.48■■■■□ 3.27
SSBP3-204ENST00000371320 POLA2Q14181 598 aa35.48■■■■□ 3.27
SSBP3-204ENST00000371320 NBPF7P0C2Y1 421 aaPredicted RBP35.47■■■■□ 3.27
SSBP3-204ENST00000371320 SURF6O75683 361 aaKnown RBP35.47■■■■□ 3.27
SSBP3-204ENST00000371320 TRIM6-TRIM34B2RNG4 842 aa35.46■■■■□ 3.27
SSBP3-204ENST00000371320 ST18O60284 1047 aa35.46■■■■□ 3.27
SSBP3-204ENST00000371320 GIGYF1O75420 1035 aaPredicted RBP35.45■■■■□ 3.27
SSBP3-204ENST00000371320 RILPL2Q969X0 211 aa35.45■■■■□ 3.27
SSBP3-204ENST00000371320 CAMTA1Q9Y6Y1 1673 aa35.45■■■■□ 3.27
SSBP3-204ENST00000371320 ADCY9O60503 1353 aa35.45■■■■□ 3.27
SSBP3-204ENST00000371320 SRGAP3O43295 1099 aa35.45■■■■□ 3.27
SSBP3-204ENST00000371320 ZC3H6P61129 1189 aaKnown RBP35.45■■■■□ 3.27
SSBP3-204ENST00000371320 ESYT1Q9BSJ8 1104 aa35.45■■■■□ 3.27
SSBP3-204ENST00000371320 GZF1Q9H116 711 aaPredicted RBP35.45■■■■□ 3.27
SSBP3-204ENST00000371320 IL1RAPL2Q9NP60 686 aa35.45■■■■□ 3.27
SSBP3-204ENST00000371320 AOX1Q06278 1338 aa35.45■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms