RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 ABCC4O15439 1325 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 CPA1P15085 419 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 PLA2G4AP47712 749 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 ARHGEF5Q12774 1597 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 ERCC6LQ2NKX8 1250 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 TMEM132EQ6IEE7 984 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 FAM173BQ6P4H8 233 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 FHOD1Q9Y613 1164 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 ATP10AO60312 1499 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 ATP10BO94823 1461 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 NOP2P46087 812 aaKnown RBP11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 C8orf58Q8NAV2 365 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 TMEM87AQ8NBN3 555 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 ANO2Q9NQ90 1003 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
HMGCLL1-204ENST00000370852 GOLGA6L6A8MZA4 724 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 ZSCAN22P10073 491 aaPredicted RBP11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 LIG1P18858 919 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 SYT1P21579 422 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 TNNT3P45378 269 aaPredicted RBP11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 CASC1Q6TDU7 716 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 TRIM5Q9C035 493 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 CBX8Q9HC52 389 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 POLKQ9UBT6 870 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 VGFO15240 615 aaPredicted RBP11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 KRBA2Q6ZNG9 492 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 PHACTR3Q96KR7 559 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 PAXBP1Q9Y5B6 917 aa11.25□□□□□ -0.61
HMGCLL1-204ENST00000370852 CDC42BPBQ9Y5S2 1711 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 A0A087WWV3 80 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 LARGE1O95461 756 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 ZNF75DP51815 510 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 ANO6Q4KMQ2 910 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 UNC5CLQ8IV45 518 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 SMARCE1Q969G3 411 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 INTS4Q96HW7 963 aaKnown RBP11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 DUOX2Q9NRD8 1548 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 IFT140Q96RY7 1462 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 DHX16O60231 1041 aaKnown RBP11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 ESYT1Q9BSJ8 1104 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
HMGCLL1-204ENST00000370852 RTL1A6NKG5 1358 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 IL16Q14005 1332 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 SEC31AO94979 1220 aaKnown RBP11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 TPM3P06753 285 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 CLCN6P51797 869 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 TYRO3Q06418 890 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 SAFB2Q14151 953 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 SIRT1Q96EB6 747 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 EPC1Q9H2F5 836 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 STX6O43752 255 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 HMOX1P09601 288 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 MBIPQ9NS73 344 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
HMGCLL1-204ENST00000370852 MAST1Q9Y2H9 1570 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 PTPRCP08575 1304 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 F13A1P00488 732 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 PNMA6AP0CW24 399 aaPredicted RBP11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 CCDC192P0DO97 292 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 PDE1AP54750 535 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 ANKRD44Q8N8A2 993 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 FAM200AQ8TCP9 573 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 MEIS3Q99687 375 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 CABP2Q9NPB3 220 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 ATP10DQ9P241 1426 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 ARHGEF40Q8TER5 1519 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
HMGCLL1-204ENST00000370852 MAP4K4O95819 1239 aaPredicted RBP11.21□□□□□ -0.61
HMGCLL1-204ENST00000370852 MYCNP04198 464 aaPredicted RBP11.21□□□□□ -0.61
HMGCLL1-204ENST00000370852 RAD50Q92878 1312 aa11.21□□□□□ -0.61
HMGCLL1-204ENST00000370852 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
HMGCLL1-204ENST00000370852 FBLN2P98095 1184 aa11.21□□□□□ -0.61
HMGCLL1-204ENST00000370852 DCTN1Q14203 1278 aa11.21□□□□□ -0.61
HMGCLL1-204ENST00000370852 PTPN14Q15678 1187 aa11.21□□□□□ -0.61
HMGCLL1-204ENST00000370852 FERMT3Q86UX7 667 aa11.21□□□□□ -0.61
HMGCLL1-204ENST00000370852 ADGRL1O94910 1474 aa11.21□□□□□ -0.62
HMGCLL1-204ENST00000370852 ABCA8O94911 1581 aa11.21□□□□□ -0.62
HMGCLL1-204ENST00000370852 RGS12O14924 1447 aa11.21□□□□□ -0.62
HMGCLL1-204ENST00000370852 FAM83GA6ND36 823 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 MYO1CO00159 1063 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 GORABQ5T7V8 394 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 DNAJC25Q9H1X3 360 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 RASSF4Q9H2L5 321 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 TRAPPC8Q9Y2L5 1435 aa11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 H2AFXP16104 143 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 BRPF1P55201 1214 aaPredicted RBP11.2□□□□□ -0.62
HMGCLL1-204ENST00000370852 RUFY3Q7L099 469 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms