RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 GLI2P10070 1586 aa8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 OTUD7AQ8TE49 926 aaPredicted RBP8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 MEX3CQ5U5Q3 659 aaKnown RBP8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 SMC5Q8IY18 1101 aa8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 ANKRD44Q8N8A2 993 aa8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 LMTK2Q8IWU2 1503 aa8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 ALKQ9UM73 1620 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 A0A087WZG4 1122 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 APPP05067 770 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 UBE3BQ7Z3V4 1068 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 TMOD3Q9NYL9 352 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 LARP1Q6PKG0 1096 aaKnown RBP8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 XAGE3Q8WTP9 111 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 FMNL2Q96PY5 1086 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 BOLA2Q9H3K6 86 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 MAP3K5Q99683 1374 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 NLRP1Q9C000 1473 aa8.65□□□□□ -1.02
TGFBR3-202ENST00000370399 CEP85Q6P2H3 762 aa8.65□□□□□ -1.03
TGFBR3-202ENST00000370399 USP6P35125 1406 aa8.65□□□□□ -1.03
TGFBR3-202ENST00000370399 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 KIF1BPQ96EK5 621 aa8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 GOLGA6L3A6NEY3 463 aa8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 GPTP24298 496 aa8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 BMP2KLQ5H9B9 411 aa8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 PA2G4Q9UQ80 394 aaKnown RBP8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 RNMTO43148 476 aaKnown RBP8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 FOSBP53539 338 aa8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 ZCRB1Q8TBF4 217 aaKnown RBP8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 LARP6Q9BRS8 491 aaKnown RBP8.64□□□□□ -1.03
TGFBR3-202ENST00000370399 PIK3R4Q99570 1358 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 HTATSF1O43719 755 aaKnown RBP8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 SDSP20132 328 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 MCTP1Q6DN14 999 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 ANKRD13DQ6ZTN6 518 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 TBC1D32Q96NH3 1257 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 TULP4Q9NRJ4 1543 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 ZRSR1Q15695 479 aaKnown RBP8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 VPS37CA5D8V6 355 aaPredicted RBP8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 SNRPA1P09661 255 aaKnown RBP8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 RABEP1Q15276 862 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 USP19O94966 1318 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 TMEM94Q12767 1356 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 DCTPP1Q9H773 170 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 FAM135BQ49AJ0 1406 aa8.63□□□□□ -1.03
TGFBR3-202ENST00000370399 DDX11L8A8MPP1 907 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 FKBP4Q02790 459 aaKnown RBP eCLIP8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 CCDC57Q2TAC2 916 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 FRMPD1Q5SYB0 1578 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 L1TD1Q5T7N2 865 aaKnown RBP8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 AEBP2Q6ZN18 517 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 BICDL1Q6ZP65 573 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 ERC1Q8IUD2 1116 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 ATP7BP35670 1465 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 AATKQ6ZMQ8 1374 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 CNNM1Q9NRU3 951 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 SLAIN2Q9P270 581 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 CAMSAP1Q5T5Y3 1602 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 K7ELQ4 463 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 EXOC5O00471 708 aa8.62□□□□□ -1.03
TGFBR3-202ENST00000370399 NBPF7P0C2Y1 421 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 PDE1AP54750 535 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 GNL2Q13823 731 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 TTC22Q5TAA0 569 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 RHPN1Q8TCX5 695 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 ISY1Q9ULR0 285 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 NEXMIFQ5QGS0 1516 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 PNMA6EA0A0J9YXQ4 647 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 SETD1BQ9UPS6 1966 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 PTPRMP28827 1452 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 STARD3NLO95772 234 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 ATP8B2P98198 1209 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 ZNF790Q6PG37 636 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 KSR2Q6VAB6 950 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 VPS37DQ86XT2 251 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 PLEKHM2Q8IWE5 1019 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 NGLY1Q96IV0 654 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 PHF23Q9BUL5 403 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 BTG4Q9NY30 223 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 SMC3Q9UQE7 1217 aa8.61□□□□□ -1.03
TGFBR3-202ENST00000370399 KDM4AO75164 1064 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 FAM184AQ8NB25 1140 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 CEP126Q9P2H0 1117 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 TRAK2O60296 914 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 ARHGEF25Q86VW2 580 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 ZNF496Q96IT1 587 aaPredicted RBP8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 PRAMEF22A3QJZ6 481 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 GRM8O00222 908 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 GLRX3O76003 335 aaKnown RBP8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 EIF4A1P60842 406 aaKnown RBP8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 STK3Q13188 491 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 STK11IPQ8N1F8 1099 aa8.6□□□□□ -1.03
TGFBR3-202ENST00000370399 IGSF1Q8N6C5 1336 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 H3BQV1 296 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms