RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 RGS12O14924 1447 aa12.12□□□□□ -0.47
HIPK1-206ENST00000369559 CFAP65Q6ZU64 1925 aaKnown RBP12.12□□□□□ -0.47
HIPK1-206ENST00000369559 TCHHQ07283 1943 aa12.12□□□□□ -0.47
HIPK1-206ENST00000369559 TPM3P06753 285 aa12.12□□□□□ -0.47
HIPK1-206ENST00000369559 PALD1Q9ULE6 856 aa12.12□□□□□ -0.47
HIPK1-206ENST00000369559 PDE1AP54750 535 aa12.12□□□□□ -0.47
HIPK1-206ENST00000369559 TAF3Q5VWG9 929 aa12.12□□□□□ -0.47
HIPK1-206ENST00000369559 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
HIPK1-206ENST00000369559 KCNF1Q9H3M0 494 aa12.11□□□□□ -0.47
HIPK1-206ENST00000369559 PYCARDQ9ULZ3 195 aa12.11□□□□□ -0.47
HIPK1-206ENST00000369559 MSH6P52701 1360 aa12.11□□□□□ -0.47
HIPK1-206ENST00000369559 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
HIPK1-206ENST00000369559 RPAP1Q9BWH6 1393 aaPredicted RBP12.11□□□□□ -0.47
HIPK1-206ENST00000369559 VGFO15240 615 aaPredicted RBP12.11□□□□□ -0.47
HIPK1-206ENST00000369559 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
HIPK1-206ENST00000369559 LMOD3Q0VAK6 560 aa12.11□□□□□ -0.47
HIPK1-206ENST00000369559 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
HIPK1-206ENST00000369559 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
HIPK1-206ENST00000369559 ABCC3O15438 1527 aa12.1□□□□□ -0.47
HIPK1-206ENST00000369559 NUTM2DQ5VT03 806 aaPredicted RBP12.1□□□□□ -0.47
HIPK1-206ENST00000369559 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
HIPK1-206ENST00000369559 RIMS2Q9UQ26 1411 aa12.1□□□□□ -0.47
HIPK1-206ENST00000369559 UBE2HP62256 183 aa12.1□□□□□ -0.47
HIPK1-206ENST00000369559 OGFRQ9NZT2 677 aa12.1□□□□□ -0.47
HIPK1-206ENST00000369559 DLG5Q8TDM6 1919 aa12.1□□□□□ -0.47
HIPK1-206ENST00000369559 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
HIPK1-206ENST00000369559 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 CLTCQ00610 1675 aaKnown RBP12.09□□□□□ -0.47
HIPK1-206ENST00000369559 HMMRO75330 724 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 MEIS3Q99687 375 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 FUCA2Q9BTY2 467 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 ANO2Q9NQ90 1003 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 GOLGA6L6A8MZA4 724 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 IGSF3O75054 1194 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 SSH2Q76I76 1423 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
HIPK1-206ENST00000369559 CPSF1Q10570 1443 aaKnown RBP12.08□□□□□ -0.47
HIPK1-206ENST00000369559 AP5Z1O43299 807 aa12.08□□□□□ -0.48
HIPK1-206ENST00000369559 UPF3BQ9BZI7 483 aaKnown RBP12.08□□□□□ -0.48
HIPK1-206ENST00000369559 FBLN1P23142 703 aa12.08□□□□□ -0.48
HIPK1-206ENST00000369559 STK26Q9P289 416 aa12.08□□□□□ -0.48
HIPK1-206ENST00000369559 TUBGCP6Q96RT7 1819 aa12.08□□□□□ -0.48
HIPK1-206ENST00000369559 KRT24Q2M2I5 525 aa12.08□□□□□ -0.48
HIPK1-206ENST00000369559 ZNF771Q7L3S4 317 aaPredicted RBP12.08□□□□□ -0.48
HIPK1-206ENST00000369559 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-206ENST00000369559 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-206ENST00000369559 NCBP1Q09161 790 aaKnown RBP12.07□□□□□ -0.48
HIPK1-206ENST00000369559 SYCP1Q15431 976 aa12.07□□□□□ -0.48
HIPK1-206ENST00000369559 TPRNQ4KMQ1 711 aa12.07□□□□□ -0.48
HIPK1-206ENST00000369559 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-206ENST00000369559 SIGLEC1Q9BZZ2 1709 aa12.07□□□□□ -0.48
HIPK1-206ENST00000369559 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
HIPK1-206ENST00000369559 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-206ENST00000369559 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
HIPK1-206ENST00000369559 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
HIPK1-206ENST00000369559 CHMLP26374 656 aa12.07□□□□□ -0.48
HIPK1-206ENST00000369559 GABPB1Q06547 395 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-206ENST00000369559 GIMAP6Q6P9H5 292 aa12.07□□□□□ -0.48
HIPK1-206ENST00000369559 PTPRCP08575 1304 aa12.06□□□□□ -0.48
HIPK1-206ENST00000369559 PIK3C2BO00750 1634 aa12.06□□□□□ -0.48
HIPK1-206ENST00000369559 TSHZ3Q63HK5 1081 aa12.06□□□□□ -0.48
HIPK1-206ENST00000369559 PTPRMP28827 1452 aa12.06□□□□□ -0.48
HIPK1-206ENST00000369559 IL13P35225 146 aa12.06□□□□□ -0.48
HIPK1-206ENST00000369559 SALL3Q9BXA9 1300 aa12.06□□□□□ -0.48
HIPK1-206ENST00000369559 YTHDC2Q9H6S0 1430 aaKnown RBP12.06□□□□□ -0.48
HIPK1-206ENST00000369559 PLPPR3Q6T4P5 718 aa12.05□□□□□ -0.48
HIPK1-206ENST00000369559 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
HIPK1-206ENST00000369559 CTNNA3Q9UI47 895 aa12.05□□□□□ -0.48
HIPK1-206ENST00000369559 KIAA0232Q92628 1395 aa12.05□□□□□ -0.48
HIPK1-206ENST00000369559 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
HIPK1-206ENST00000369559 CGNQ9P2M7 1197 aaKnown RBP12.05□□□□□ -0.48
HIPK1-206ENST00000369559 ATP6V1DQ9Y5K8 247 aa12.05□□□□□ -0.48
HIPK1-206ENST00000369559 FIBPO43427 364 aa12.05□□□□□ -0.48
HIPK1-206ENST00000369559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.05□□□□□ -0.48
HIPK1-206ENST00000369559 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.48
HIPK1-206ENST00000369559 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
HIPK1-206ENST00000369559 STX6O43752 255 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 RILPL2Q969X0 211 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 SMTNL1A8MU46 457 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 F13A1P00488 732 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 PRAM1Q96QH2 718 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 AGLP35573 1532 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 SYT1P21579 422 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 TMEM51Q9NW97 253 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 DDX41Q9UJV9 622 aaKnown RBP12.04□□□□□ -0.48
HIPK1-206ENST00000369559 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
HIPK1-206ENST00000369559 EPB41L2O43491 1005 aaKnown RBP12.03□□□□□ -0.48
HIPK1-206ENST00000369559 CCDC192P0DO97 292 aa12.03□□□□□ -0.48
HIPK1-206ENST00000369559 PTGS1P23219 599 aa12.03□□□□□ -0.48
HIPK1-206ENST00000369559 EXOC6BQ9Y2D4 811 aa12.03□□□□□ -0.48
HIPK1-206ENST00000369559 CDK12Q9NYV4 1490 aaPredicted RBP12.03□□□□□ -0.48
HIPK1-206ENST00000369559 HSPA4P34932 840 aa12.03□□□□□ -0.48
HIPK1-206ENST00000369559 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.48
HIPK1-206ENST00000369559 CDK19Q9BWU1 502 aa12.02□□□□□ -0.49
HIPK1-206ENST00000369559 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.02□□□□□ -0.49
HIPK1-206ENST00000369559 SLFN14P0C7P3 912 aa12.02□□□□□ -0.49
HIPK1-206ENST00000369559 C16orf45Q96MC5 204 aaPredicted RBP12.02□□□□□ -0.49
HIPK1-206ENST00000369559 FAM200AQ8TCP9 573 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms