RNA–Protein interactions for RNA: ENST00000369301.3

NHLRC2-201, Transcript of NHL repeat containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NHLRC2, Length 11,051 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC2-201ENST00000369301 HSPA4P34932 840 aa9.93□□□□□ -0.82
NHLRC2-201ENST00000369301 GABPB2Q8TAK5 448 aaPredicted RBP9.93□□□□□ -0.82
NHLRC2-201ENST00000369301 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
NHLRC2-201ENST00000369301 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
NHLRC2-201ENST00000369301 ARID4AP29374 1257 aaPredicted RBP9.93□□□□□ -0.82
NHLRC2-201ENST00000369301 MPHOSPH8Q99549 860 aa9.93□□□□□ -0.82
NHLRC2-201ENST00000369301 IFI16Q16666 785 aaKnown RBP9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 CASQ2O14958 399 aaPredicted RBP9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 CRCPO75575 148 aa9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 XPCQ01831 940 aaPredicted RBP9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 AIMP1Q12904 312 aaKnown RBP9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 UBXN4Q92575 508 aa9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 EHBP1Q8NDI1 1231 aa9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 ERCC5P28715 1186 aaPredicted RBP9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 PAFAH1B1P43034 410 aa9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 TRIM35Q9UPQ4 493 aa9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.92□□□□□ -0.829e-7■□□□□ 10.1
NHLRC2-201ENST00000369301 ATP2A2P16615 1042 aaKnown RBP9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 WDR78Q5VTH9 848 aa9.92□□□□□ -0.82
NHLRC2-201ENST00000369301 CCDC155Q8N6L0 562 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 CKAP4Q07065 602 aaKnown RBP9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 MSANTD4Q8NCY6 345 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 CCT6BQ92526 530 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 CFAP157Q5JU67 520 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 HAUS7Q99871 368 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 PRPHP41219 470 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 NCBP1Q09161 790 aaKnown RBP9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 NUP133Q8WUM0 1156 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 TBC1D31Q96DN5 1066 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 FAM177A1Q8N128 213 aaPredicted RBP9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 STIM2Q9P246 746 aa9.91□□□□□ -0.82
NHLRC2-201ENST00000369301 AFAP1L2Q8N4X5 818 aa9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 CRACR2BQ8N4Y2 399 aaPredicted RBP9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 ERCC6LQ2NKX8 1250 aa9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 TXNDC16Q9P2K2 825 aa9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 CTNNA3Q9UI47 895 aa9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 SLF2Q8IX21 1173 aa9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 GPRASP1Q5JY77 1395 aa9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 GNAI1P63096 354 aa9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 CALCOCO2Q13137 446 aa9.9□□□□□ -0.82
NHLRC2-201ENST00000369301 CASTP20810 708 aaKnown RBP9.9□□□□□ -0.83
NHLRC2-201ENST00000369301 GBP7Q8N8V2 638 aaPredicted RBP9.9□□□□□ -0.83
NHLRC2-201ENST00000369301 CCDC77Q9BR77 488 aa9.9□□□□□ -0.83
NHLRC2-201ENST00000369301 UPF3BQ9BZI7 483 aaKnown RBP9.9□□□□□ -0.83
NHLRC2-201ENST00000369301 UBA5Q9GZZ9 404 aa9.9□□□□□ -0.83
NHLRC2-201ENST00000369301 VCX3BQ9H321 246 aa9.9□□□□□ -0.83
NHLRC2-201ENST00000369301 SH2D4BQ5SQS7 431 aa9.9□□□□□ -0.83
NHLRC2-201ENST00000369301 PDE4AP27815 886 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 TDO2P48775 406 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 KRT85P78386 507 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 EFCAB2Q5VUJ9 269 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 CFAP100Q494V2 611 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 NLRP2Q9NX02 1062 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 NUP155O75694 1391 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 PKD2Q13563 968 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 USP5P45974 858 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 HLTFQ14527 1009 aaKnown RBP eCLIP9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 CYP46A1Q9Y6A2 500 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 WDR46O15213 610 aaKnown RBP9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 KIAA0753Q2KHM9 967 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 NUF2Q9BZD4 464 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 TSPYL4Q9UJ04 414 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 TTC16Q8NEE8 873 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 ATRIPQ8WXE1 791 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 B4DLN1 442 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 GNAI3P08754 354 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 MRPL12P52815 198 aaKnown RBP9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 CTR9Q6PD62 1173 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 CCDC144CPQ8IYA2 1237 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 VCXQ9H320 206 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 CALCOCO1Q9P1Z2 691 aa9.89□□□□□ -0.83
NHLRC2-201ENST00000369301 RABGAP1Q9Y3P9 1069 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 SFPQP23246 707 aaKnown RBP eCLIP9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 ERICH4A6NGS2 130 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 RFC1P35251 1148 aaPredicted RBP9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 GSDMBQ8TAX9 411 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 PKNOX2Q96KN3 472 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 CCDC12Q8WUD4 166 aaPredicted RBP9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 TACC3Q9Y6A5 838 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 FLIIQ13045 1269 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 PRR16Q569H4 304 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 SPC24Q8NBT2 197 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 TBC1D5Q92609 795 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 KDM4AO75164 1064 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 CCDC63Q8NA47 563 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 JAKMIP2Q96AA8 810 aa9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 DNAJC21Q5F1R6 531 aaKnown RBP9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 PUF60Q9UHX1 559 aaKnown RBP9.88□□□□□ -0.83
NHLRC2-201ENST00000369301 YEATS4O95619 227 aa9.87□□□□□ -0.83
NHLRC2-201ENST00000369301 CGNQ9P2M7 1197 aaKnown RBP9.87□□□□□ -0.83
NHLRC2-201ENST00000369301 BAG4O95429 457 aaKnown RBP9.87□□□□□ -0.83
NHLRC2-201ENST00000369301 GOLIM4O00461 696 aa9.87□□□□□ -0.83
NHLRC2-201ENST00000369301 SETDB1Q15047 1291 aa9.87□□□□□ -0.83
NHLRC2-201ENST00000369301 IMPG2Q9BZV3 1241 aa9.87□□□□□ -0.83
NHLRC2-201ENST00000369301 CCDC196A0A1B0GTZ2 297 aa9.87□□□□□ -0.83
NHLRC2-201ENST00000369301 FIBPO43427 364 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms