RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 KIF18AQ8NI77 898 aa19.41■□□□□ 0.7
CHD1L-203ENST00000369259 BCL11BQ9C0K0 894 aaPredicted RBP19.41■□□□□ 0.7
CHD1L-203ENST00000369259 TERF2IPQ9NYB0 399 aa19.41■□□□□ 0.7
CHD1L-203ENST00000369259 VGLL3A8MV65 326 aa19.4■□□□□ 0.7
CHD1L-203ENST00000369259 KCNJ4P48050 445 aa19.4■□□□□ 0.7
CHD1L-203ENST00000369259 UPF3BQ9BZI7 483 aaKnown RBP19.4■□□□□ 0.7
CHD1L-203ENST00000369259 ANO2Q9NQ90 1003 aa19.4■□□□□ 0.7
CHD1L-203ENST00000369259 MROH1Q8NDA8 1641 aa19.4■□□□□ 0.7
CHD1L-203ENST00000369259 PAXBP1Q9Y5B6 917 aa19.4■□□□□ 0.7
CHD1L-203ENST00000369259 ZFYVE9O95405 1425 aa19.4■□□□□ 0.7
CHD1L-203ENST00000369259 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.69
CHD1L-203ENST00000369259 C16orf45Q96MC5 204 aaPredicted RBP19.39■□□□□ 0.69
CHD1L-203ENST00000369259 ANKRD26Q9UPS8 1709 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 GLI2P10070 1586 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 RPGRIP1LQ68CZ1 1315 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 PPLO60437 1756 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 HMMRO75330 724 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 HMOX1P09601 288 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 CCDC192P0DO97 292 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 TNNT1P13805 278 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 KRT222Q8N1A0 295 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 CCDC112Q8NEF3 446 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 ATP6V1DQ9Y5K8 247 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 SSH2Q76I76 1423 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 ATP7AQ04656 1500 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 TCHHQ07283 1943 aa19.38■□□□□ 0.69
CHD1L-203ENST00000369259 FIBPO43427 364 aa19.37■□□□□ 0.69
CHD1L-203ENST00000369259 ASXL2Q76L83 1435 aa19.37■□□□□ 0.69
CHD1L-203ENST00000369259 NAA30Q147X3 362 aaPredicted RBP19.37■□□□□ 0.69
CHD1L-203ENST00000369259 TIGD1Q96MW7 591 aa19.37■□□□□ 0.69
CHD1L-203ENST00000369259 STX6O43752 255 aa19.36■□□□□ 0.69
CHD1L-203ENST00000369259 CHMLP26374 656 aa19.36■□□□□ 0.69
CHD1L-203ENST00000369259 SAFB2Q14151 953 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHD1L-203ENST00000369259 MEIS3Q99687 375 aa19.36■□□□□ 0.69
CHD1L-203ENST00000369259 MSH6P52701 1360 aa19.36■□□□□ 0.69
CHD1L-203ENST00000369259 F13A1P00488 732 aa19.36■□□□□ 0.69
CHD1L-203ENST00000369259 ARHGEF28Q8N1W1 1705 aaKnown RBP19.36■□□□□ 0.69
CHD1L-203ENST00000369259 LMOD3Q0VAK6 560 aa19.35■□□□□ 0.69
CHD1L-203ENST00000369259 CCDC186Q7Z3E2 898 aa19.35■□□□□ 0.69
CHD1L-203ENST00000369259 FAM200AQ8TCP9 573 aa19.35■□□□□ 0.69
CHD1L-203ENST00000369259 SYT1P21579 422 aa19.35■□□□□ 0.69
CHD1L-203ENST00000369259 KRT24Q2M2I5 525 aa19.35■□□□□ 0.69
CHD1L-203ENST00000369259 SLC20A2Q08357 652 aa19.34■□□□□ 0.69
CHD1L-203ENST00000369259 ZNF397Q8NF99 534 aaPredicted RBP19.34■□□□□ 0.69
CHD1L-203ENST00000369259 LRMPQ12912 555 aa19.33■□□□□ 0.69
CHD1L-203ENST00000369259 TSHZ3Q63HK5 1081 aa19.33■□□□□ 0.69
CHD1L-203ENST00000369259 POLKQ9UBT6 870 aa19.33■□□□□ 0.69
CHD1L-203ENST00000369259 SALL3Q9BXA9 1300 aa19.33■□□□□ 0.68
CHD1L-203ENST00000369259 CD163L1Q9NR16 1453 aa19.32■□□□□ 0.68
CHD1L-203ENST00000369259 FAM193AP78312 1265 aa19.32■□□□□ 0.68
CHD1L-203ENST00000369259 DNAJC2Q99543 621 aaKnown RBP19.32■□□□□ 0.68
CHD1L-203ENST00000369259 FAM53CQ9NYF3 392 aa19.32■□□□□ 0.68
CHD1L-203ENST00000369259 CALCOCO1Q9P1Z2 691 aa19.32■□□□□ 0.68
CHD1L-203ENST00000369259 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.32■□□□□ 0.68
CHD1L-203ENST00000369259 EPB41L2O43491 1005 aaKnown RBP19.32■□□□□ 0.68
CHD1L-203ENST00000369259 RILPL2Q969X0 211 aa19.32■□□□□ 0.68
CHD1L-203ENST00000369259 LMTK2Q8IWU2 1503 aa19.31■□□□□ 0.68
CHD1L-203ENST00000369259 TRIM6-TRIM34B2RNG4 842 aa19.31■□□□□ 0.68
CHD1L-203ENST00000369259 HSPA4P34932 840 aa19.31■□□□□ 0.68
CHD1L-203ENST00000369259 HAP1P54257 671 aaPredicted RBP19.31■□□□□ 0.68
CHD1L-203ENST00000369259 ZSCAN25Q6NSZ9 544 aa19.31■□□□□ 0.68
CHD1L-203ENST00000369259 HDGFL2Q7Z4V5 671 aaPredicted RBP19.31■□□□□ 0.68
CHD1L-203ENST00000369259 DRC7Q8IY82 874 aa19.31■□□□□ 0.68
CHD1L-203ENST00000369259 KIAA0232Q92628 1395 aa19.31■□□□□ 0.68
CHD1L-203ENST00000369259 CPSF1Q10570 1443 aaKnown RBP19.31■□□□□ 0.68
CHD1L-203ENST00000369259 RIMS2Q9UQ26 1411 aa19.31■□□□□ 0.68
CHD1L-203ENST00000369259 TPD52L1Q16890 204 aaPredicted RBP19.3■□□□□ 0.68
CHD1L-203ENST00000369259 KMT5BQ4FZB7 885 aa19.3■□□□□ 0.68
CHD1L-203ENST00000369259 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.3■□□□□ 0.68
CHD1L-203ENST00000369259 CAMSAP1Q5T5Y3 1602 aa19.3■□□□□ 0.68
CHD1L-203ENST00000369259 PTPRCP08575 1304 aa19.3■□□□□ 0.68
CHD1L-203ENST00000369259 SMC3Q9UQE7 1217 aa19.3■□□□□ 0.68
CHD1L-203ENST00000369259 ARAP3Q8WWN8 1544 aa19.3■□□□□ 0.68
CHD1L-203ENST00000369259 DNM1Q05193 864 aaKnown RBP19.29■□□□□ 0.68
CHD1L-203ENST00000369259 NRBP1Q9UHY1 535 aa19.29■□□□□ 0.68
CHD1L-203ENST00000369259 MRVI1Q9Y6F6 885 aa19.29■□□□□ 0.68
CHD1L-203ENST00000369259 CEP135Q66GS9 1140 aa19.29■□□□□ 0.68
CHD1L-203ENST00000369259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.29■□□□□ 0.68
CHD1L-203ENST00000369259 LUZP1Q86V48 1076 aa19.29■□□□□ 0.68
CHD1L-203ENST00000369259 FAM83GA6ND36 823 aa19.28■□□□□ 0.68
CHD1L-203ENST00000369259 TULP2O00295 520 aa19.28■□□□□ 0.68
CHD1L-203ENST00000369259 PDIA4P13667 645 aaKnown RBP19.28■□□□□ 0.68
CHD1L-203ENST00000369259 FBLN1P23142 703 aa19.28■□□□□ 0.68
CHD1L-203ENST00000369259 CREBRFQ8IUR6 639 aa19.28■□□□□ 0.68
CHD1L-203ENST00000369259 ABCA9Q8IUA7 1624 aa19.28■□□□□ 0.68
CHD1L-203ENST00000369259 TYRO3Q06418 890 aa19.28■□□□□ 0.68
CHD1L-203ENST00000369259 MAP3K11Q16584 847 aa19.28■□□□□ 0.68
CHD1L-203ENST00000369259 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
CHD1L-203ENST00000369259 VGFO15240 615 aaPredicted RBP19.27■□□□□ 0.68
CHD1L-203ENST00000369259 ZNF75DP51815 510 aa19.27■□□□□ 0.68
CHD1L-203ENST00000369259 PLA2G4DQ86XP0 818 aa19.27■□□□□ 0.68
CHD1L-203ENST00000369259 TTC14Q96N46 770 aa19.27■□□□□ 0.68
CHD1L-203ENST00000369259 LRRCC1Q9C099 1032 aa19.27■□□□□ 0.68
CHD1L-203ENST00000369259 EXOC6BQ9Y2D4 811 aa19.27■□□□□ 0.68
CHD1L-203ENST00000369259 IL13P35225 146 aa19.27■□□□□ 0.67
CHD1L-203ENST00000369259 TRIM5Q9C035 493 aa19.27■□□□□ 0.67
CHD1L-203ENST00000369259 ABCC3O15438 1527 aa19.26■□□□□ 0.67
CHD1L-203ENST00000369259 ERICH4A6NGS2 130 aa19.26■□□□□ 0.67
CHD1L-203ENST00000369259 AK2P54819 239 aa19.26■□□□□ 0.67
CHD1L-203ENST00000369259 NUTM2DQ5VT03 806 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms