RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 KIF13AQ9H1H9 1805 aa15.34■□□□□ 0.05
LINC01561-201ENST00000369071 SLC4A10Q6U841 1118 aa15.34■□□□□ 0.05
LINC01561-201ENST00000369071 SYCE3A1L190 88 aa15.33■□□□□ 0.04
LINC01561-201ENST00000369071 MBD3O95983 291 aa15.33■□□□□ 0.04
LINC01561-201ENST00000369071 GNAI2P04899 355 aa15.33■□□□□ 0.04
LINC01561-201ENST00000369071 IL17RAQ96F46 866 aa15.33■□□□□ 0.04
LINC01561-201ENST00000369071 EXOC6BQ9Y2D4 811 aa15.33■□□□□ 0.04
LINC01561-201ENST00000369071 TSHZ3Q63HK5 1081 aa15.32■□□□□ 0.04
LINC01561-201ENST00000369071 PALD1Q9ULE6 856 aa15.32■□□□□ 0.04
LINC01561-201ENST00000369071 USP31Q70CQ4 1352 aa15.32■□□□□ 0.04
LINC01561-201ENST00000369071 ARHGEF10O15013 1369 aa15.32■□□□□ 0.04
LINC01561-201ENST00000369071 FOXO3O43524 673 aa15.32■□□□□ 0.04
LINC01561-201ENST00000369071 ANAPC15P60006 121 aa15.32■□□□□ 0.04
LINC01561-201ENST00000369071 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
LINC01561-201ENST00000369071 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
LINC01561-201ENST00000369071 INTS4Q96HW7 963 aaKnown RBP15.32■□□□□ 0.04
LINC01561-201ENST00000369071 TSPYL4Q9UJ04 414 aa15.32■□□□□ 0.04
LINC01561-201ENST00000369071 TOPAZ1Q8N9V7 1692 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 CHMLP26374 656 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 LRRCC1Q9C099 1032 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 PDCL3Q9H2J4 239 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 ZKSCAN5Q9Y2L8 839 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 ACEP12821 1306 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 MAP3K19Q56UN5 1328 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 MX1P20591 662 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 FAM69CQ0P6D2 419 aa15.31■□□□□ 0.04
LINC01561-201ENST00000369071 MTHFSDQ2M296 383 aaKnown RBP15.31■□□□□ 0.04
LINC01561-201ENST00000369071 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
LINC01561-201ENST00000369071 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
LINC01561-201ENST00000369071 PLEKHG3A1L390 1219 aa15.3■□□□□ 0.04
LINC01561-201ENST00000369071 MCCP23508 829 aa15.3■□□□□ 0.04
LINC01561-201ENST00000369071 MCM5P33992 734 aa15.3■□□□□ 0.04
LINC01561-201ENST00000369071 STAP2Q9UGK3 403 aa15.3■□□□□ 0.04
LINC01561-201ENST00000369071 USP6P35125 1406 aa15.29■□□□□ 0.04
LINC01561-201ENST00000369071 ATP8B2P98198 1209 aa15.29■□□□□ 0.04
LINC01561-201ENST00000369071 PNMA6EA0A0J9YXQ4 647 aa15.29■□□□□ 0.04
LINC01561-201ENST00000369071 RIMS1Q86UR5 1692 aaKnown RBP15.28■□□□□ 0.04
LINC01561-201ENST00000369071 XPCQ01831 940 aaPredicted RBP15.28■□□□□ 0.04
LINC01561-201ENST00000369071 VSIG10Q8N0Z9 540 aa15.28■□□□□ 0.04
LINC01561-201ENST00000369071 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
LINC01561-201ENST00000369071 CCDC39Q9UFE4 941 aa15.28■□□□□ 0.04
LINC01561-201ENST00000369071 R3HCC1Q9Y3T6 440 aaKnown RBP15.28■□□□□ 0.04
LINC01561-201ENST00000369071 XRN1Q8IZH2 1706 aaKnown RBP15.28■□□□□ 0.04
LINC01561-201ENST00000369071 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.28■□□□□ 0.04
LINC01561-201ENST00000369071 GNAI3P08754 354 aa15.28■□□□□ 0.04
LINC01561-201ENST00000369071 ANO2Q9NQ90 1003 aa15.28■□□□□ 0.04
LINC01561-201ENST00000369071 KDRP35968 1356 aa15.27■□□□□ 0.04
LINC01561-201ENST00000369071 FLIIQ13045 1269 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 RILPL2Q969X0 211 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 STK31Q9BXU1 1019 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 SRCIN1Q9C0H9 1055 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 FAM208AQ9UK61 1670 aaKnown RBP15.26■□□□□ 0.03
LINC01561-201ENST00000369071 FMN2Q9NZ56 1722 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 TRIM6-TRIM34B2RNG4 842 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 HDGFP51858 240 aaKnown RBP15.26■□□□□ 0.03
LINC01561-201ENST00000369071 MLECQ14165 292 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 UNC5CLQ8IV45 518 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 TSPY26PQ9H489 355 aa15.26■□□□□ 0.03
LINC01561-201ENST00000369071 EPB41L2O43491 1005 aaKnown RBP15.25■□□□□ 0.03
LINC01561-201ENST00000369071 CSPP1Q1MSJ5 1256 aa15.25■□□□□ 0.03
LINC01561-201ENST00000369071 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
LINC01561-201ENST00000369071 RNF214Q8ND24 703 aa15.25■□□□□ 0.03
LINC01561-201ENST00000369071 AOX1Q06278 1338 aa15.25■□□□□ 0.03
LINC01561-201ENST00000369071 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
LINC01561-201ENST00000369071 FKBP5Q13451 457 aaPredicted RBP15.24■□□□□ 0.03
LINC01561-201ENST00000369071 CCDC30Q5VVM6 783 aa15.24■□□□□ 0.03
LINC01561-201ENST00000369071 FBXO41Q8TF61 875 aa15.24■□□□□ 0.03
LINC01561-201ENST00000369071 SYAP1Q96A49 352 aaPredicted RBP15.24■□□□□ 0.03
LINC01561-201ENST00000369071 N4BP2Q86UW6 1770 aaPredicted RBP15.24■□□□□ 0.03
LINC01561-201ENST00000369071 CEP170BQ9Y4F5 1589 aaPredicted RBP15.24■□□□□ 0.03
LINC01561-201ENST00000369071 ADAMTS13Q76LX8 1427 aa15.24■□□□□ 0.03
LINC01561-201ENST00000369071 SBNO1A3KN83 1393 aa15.24■□□□□ 0.03
LINC01561-201ENST00000369071 IGSF1Q8N6C5 1336 aa15.24■□□□□ 0.03
LINC01561-201ENST00000369071 GADD45BO75293 160 aaPredicted RBP15.24■□□□□ 0.03
LINC01561-201ENST00000369071 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
LINC01561-201ENST00000369071 UPF3BQ9BZI7 483 aaKnown RBP15.24■□□□□ 0.03
LINC01561-201ENST00000369071 ZMYND15Q9H091 742 aa15.24■□□□□ 0.03
LINC01561-201ENST00000369071 IL25Q9H293 177 aa15.24■□□□□ 0.03
LINC01561-201ENST00000369071 LRRFIP2Q9Y608 721 aaKnown RBP15.24■□□□□ 0.03
LINC01561-201ENST00000369071 FLT4P35916 1363 aa15.23■□□□□ 0.03
LINC01561-201ENST00000369071 SOX12O15370 315 aa15.23■□□□□ 0.03
LINC01561-201ENST00000369071 HTATSF1O43719 755 aaKnown RBP15.23■□□□□ 0.03
LINC01561-201ENST00000369071 HSPA4P34932 840 aa15.23■□□□□ 0.03
LINC01561-201ENST00000369071 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
LINC01561-201ENST00000369071 NUTM2FA1L443 756 aa15.22■□□□□ 0.03
LINC01561-201ENST00000369071 USP48Q86UV5 1035 aa15.22■□□□□ 0.03
LINC01561-201ENST00000369071 EYA1Q99502 592 aa15.22■□□□□ 0.03
LINC01561-201ENST00000369071 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
LINC01561-201ENST00000369071 USP44Q9H0E7 712 aa15.22■□□□□ 0.03
LINC01561-201ENST00000369071 PXDNLA1KZ92 1463 aa15.22■□□□□ 0.03
LINC01561-201ENST00000369071 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.03
LINC01561-201ENST00000369071 DIP2BQ9P265 1576 aa15.21■□□□□ 0.03
LINC01561-201ENST00000369071 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
LINC01561-201ENST00000369071 UQCRHLA0A096LP55 91 aa15.21■□□□□ 0.03
LINC01561-201ENST00000369071 UQCRHP07919 91 aa15.21■□□□□ 0.03
LINC01561-201ENST00000369071 TMEM87AQ8NBN3 555 aa15.21■□□□□ 0.03
LINC01561-201ENST00000369071 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
LINC01561-201ENST00000369071 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.03
LINC01561-201ENST00000369071 PHF14O94880 888 aa15.21■□□□□ 0.02
LINC01561-201ENST00000369071 SSH3Q8TE77 659 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms