RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 EIF4A2Q14240 407 aaKnown RBP9.92□□□□□ -0.82
CD46-208ENST00000367042 FIBPO43427 364 aa9.92□□□□□ -0.82
CD46-208ENST00000367042 OS9Q13438 667 aaPredicted RBP9.92□□□□□ -0.82
CD46-208ENST00000367042 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
CD46-208ENST00000367042 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
CD46-208ENST00000367042 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
CD46-208ENST00000367042 USP25Q9UHP3 1055 aa9.92□□□□□ -0.82
CD46-208ENST00000367042 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
CD46-208ENST00000367042 RTL1A6NKG5 1358 aa9.92□□□□□ -0.82
CD46-208ENST00000367042 USP32Q8NFA0 1604 aa9.92□□□□□ -0.82
CD46-208ENST00000367042 SETD1AO15047 1707 aaKnown RBP9.91□□□□□ -0.82
CD46-208ENST00000367042 GADD45BO75293 160 aaPredicted RBP9.91□□□□□ -0.82
CD46-208ENST00000367042 PRDM10Q9NQV6 1147 aa9.91□□□□□ -0.82
CD46-208ENST00000367042 PHF14O94880 888 aa9.91□□□□□ -0.82
CD46-208ENST00000367042 CYP2E1P05181 493 aaPredicted RBP9.91□□□□□ -0.82
CD46-208ENST00000367042 CLEC17AQ6ZS10 378 aa9.91□□□□□ -0.82
CD46-208ENST00000367042 ESYT1Q9BSJ8 1104 aa9.91□□□□□ -0.82
CD46-208ENST00000367042 PTPRMP28827 1452 aa9.91□□□□□ -0.82
CD46-208ENST00000367042 IBTKQ9P2D0 1353 aaPredicted RBP9.91□□□□□ -0.82
CD46-208ENST00000367042 AMPHP49418 695 aa9.9□□□□□ -0.82
CD46-208ENST00000367042 A2ML1A8K2U0 1454 aa9.9□□□□□ -0.82
CD46-208ENST00000367042 CD163L1Q9NR16 1453 aa9.9□□□□□ -0.82
CD46-208ENST00000367042 PIK3R4Q99570 1358 aa9.9□□□□□ -0.82
CD46-208ENST00000367042 ALKQ9UM73 1620 aa9.9□□□□□ -0.82
CD46-208ENST00000367042 EIF2S2P20042 333 aaKnown RBP9.9□□□□□ -0.82
CD46-208ENST00000367042 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.82
CD46-208ENST00000367042 FAM177BA6PVY3 158 aa9.9□□□□□ -0.83
CD46-208ENST00000367042 MCM2P49736 904 aa9.9□□□□□ -0.83
CD46-208ENST00000367042 CCT4P50991 539 aaKnown RBP9.9□□□□□ -0.83
CD46-208ENST00000367042 NUTM2GQ5VZR2 741 aa9.9□□□□□ -0.83
CD46-208ENST00000367042 USP48Q86UV5 1035 aa9.9□□□□□ -0.83
CD46-208ENST00000367042 C17orf53Q8N3J3 647 aaPredicted RBP9.9□□□□□ -0.83
CD46-208ENST00000367042 TSC1Q92574 1164 aa9.9□□□□□ -0.83
CD46-208ENST00000367042 LRRFIP2Q9Y608 721 aaKnown RBP9.9□□□□□ -0.83
CD46-208ENST00000367042 PTPRCP08575 1304 aa9.9□□□□□ -0.83
CD46-208ENST00000367042 PNMA6EA0A0J9YXQ4 647 aa9.89□□□□□ -0.83
CD46-208ENST00000367042 SURF6O75683 361 aaKnown RBP9.89□□□□□ -0.83
CD46-208ENST00000367042 TTC12Q9H892 705 aaPredicted RBP9.89□□□□□ -0.83
CD46-208ENST00000367042 HCLS1P14317 486 aaPredicted RBP9.89□□□□□ -0.83
CD46-208ENST00000367042 KCNJ4P48050 445 aa9.89□□□□□ -0.83
CD46-208ENST00000367042 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.89□□□□□ -0.83
CD46-208ENST00000367042 CHL1O00533 1208 aa9.89□□□□□ -0.83
CD46-208ENST00000367042 HS1BP3Q53T59 392 aa9.89□□□□□ -0.83
CD46-208ENST00000367042 BCL11BQ9C0K0 894 aaPredicted RBP9.89□□□□□ -0.83
CD46-208ENST00000367042 VPS37CA5D8V6 355 aaPredicted RBP9.88□□□□□ -0.83
CD46-208ENST00000367042 UBTFL1P0CB47 393 aaPredicted RBP9.88□□□□□ -0.83
CD46-208ENST00000367042 UNC5CLQ8IV45 518 aa9.88□□□□□ -0.83
CD46-208ENST00000367042 SPC24Q8NBT2 197 aa9.88□□□□□ -0.83
CD46-208ENST00000367042 CNPY2Q9Y2B0 182 aa9.88□□□□□ -0.83
CD46-208ENST00000367042 CWC27Q6UX04 472 aaKnown RBP9.88□□□□□ -0.83
CD46-208ENST00000367042 JARID2Q92833 1246 aaPredicted RBP9.88□□□□□ -0.83
CD46-208ENST00000367042 WDR33Q9C0J8 1336 aaKnown RBP9.88□□□□□ -0.83
CD46-208ENST00000367042 NRXN3Q9Y4C0 1643 aa9.88□□□□□ -0.83
CD46-208ENST00000367042 ZNF500O60304 480 aaPredicted RBP9.87□□□□□ -0.83
CD46-208ENST00000367042 BRD1O95696 1058 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 GNAI3P08754 354 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 CHMLP26374 656 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 FLIIQ13045 1269 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 SASS6Q6UVJ0 657 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 PDLIM2Q96JY6 352 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
CD46-208ENST00000367042 SMC3Q9UQE7 1217 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 CPA1P15085 419 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 ATP10DQ9P241 1426 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
CD46-208ENST00000367042 MTHFSDQ2M296 383 aaKnown RBP9.87□□□□□ -0.83
CD46-208ENST00000367042 SPG7Q9UQ90 795 aa9.87□□□□□ -0.83
CD46-208ENST00000367042 ADCY5O95622 1261 aa9.86□□□□□ -0.83
CD46-208ENST00000367042 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
CD46-208ENST00000367042 DRC7Q8IY82 874 aa9.86□□□□□ -0.83
CD46-208ENST00000367042 MAP7D2Q96T17 732 aa9.86□□□□□ -0.83
CD46-208ENST00000367042 EDC4Q6P2E9 1401 aaKnown RBP9.86□□□□□ -0.83
CD46-208ENST00000367042 MAP2P11137 1827 aaKnown RBP9.86□□□□□ -0.83
CD46-208ENST00000367042 CCDC30Q5VVM6 783 aa9.85□□□□□ -0.83
CD46-208ENST00000367042 GIMAP6Q6P9H5 292 aa9.85□□□□□ -0.83
CD46-208ENST00000367042 SRCIN1Q9C0H9 1055 aa9.85□□□□□ -0.83
CD46-208ENST00000367042 SRGAP3O43295 1099 aa9.85□□□□□ -0.83
CD46-208ENST00000367042 CASTP20810 708 aaKnown RBP9.85□□□□□ -0.83
CD46-208ENST00000367042 CCDC83Q8IWF9 413 aa9.85□□□□□ -0.83
CD46-208ENST00000367042 DIAPH3Q9NSV4 1193 aa9.85□□□□□ -0.83
CD46-208ENST00000367042 ACEP12821 1306 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 GOLGA6L4A6NEF3 574 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 DYNC1I1O14576 645 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 MCM5P33992 734 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 CHAF1AQ13111 956 aaPredicted RBP9.84□□□□□ -0.83
CD46-208ENST00000367042 FERMT3Q86UX7 667 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 HDGFL1Q5TGJ6 251 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 DLC1Q96QB1 1528 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 KIF24Q5T7B8 1368 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 CCDC183Q5T5S1 534 aa9.84□□□□□ -0.83
CD46-208ENST00000367042 MAP3K19Q56UN5 1328 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 TTC21BQ7Z4L5 1316 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 UBR1Q8IWV7 1749 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 STX6O43752 255 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 CAMK4Q16566 473 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 PPP1R42Q7Z4L9 355 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 IL25Q9H293 177 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 ANXA1P04083 346 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 AK2P54819 239 aa9.83□□□□□ -0.84
CD46-208ENST00000367042 CBX1P83916 185 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms