RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 PIK3R4Q99570 1358 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 CPLX1O14810 134 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 PPP1R42Q7Z4L9 355 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 TRMT2AQ8IZ69 625 aaKnown RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 IFNL2Q8IZJ0 200 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 CHPF2Q9P2E5 772 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 SHROOM2Q13796 1616 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 MAP3K2Q9Y2U5 619 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 NUTM2BA6NNL0 878 aaPredicted RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 NUTM2EB1AL46 878 aaPredicted RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 GLRX3O76003 335 aaKnown RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 CPLX2Q6PUV4 134 aaKnown RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 VPS37DQ86XT2 251 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 NUTM2AQ8IVF1 878 aaPredicted RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 UPF3BQ9BZI7 483 aaKnown RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 C19orf44Q9H6X5 657 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 ZBTB7BO15156 539 aaPredicted RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 PRPF40AO75400 957 aaKnown RBP10.7□□□□□ -0.7
NLRP3-204ENST00000366497 SEC24BO95487 1268 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 GLIPR1L2Q4G1C9 344 aa10.7□□□□□ -0.7
NLRP3-204ENST00000366497 G3V3G9 751 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 CDK11BP21127 795 aaKnown RBP10.69□□□□□ -0.7
NLRP3-204ENST00000366497 DCAF8Q5TAQ9 597 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 CABLES1Q8TDN4 633 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 CCDC85AQ96PX6 553 aaPredicted RBP10.69□□□□□ -0.7
NLRP3-204ENST00000366497 ORAI2Q96SN7 254 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 CWC22Q9HCG8 908 aaKnown RBP10.69□□□□□ -0.7
NLRP3-204ENST00000366497 CCDC57Q2TAC2 916 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
NLRP3-204ENST00000366497 CIZ1Q9ULV3 898 aaPredicted RBP10.69□□□□□ -0.7
NLRP3-204ENST00000366497 CHL1O00533 1208 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 AKAP4Q5JQC9 854 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 TTC22Q5TAA0 569 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 IP6K1Q92551 441 aa10.69□□□□□ -0.7
NLRP3-204ENST00000366497 FOSBP53539 338 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 SLC39A6Q13433 755 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
NLRP3-204ENST00000366497 RALYLQ86SE5 291 aaKnown RBP10.68□□□□□ -0.7
NLRP3-204ENST00000366497 FMNL2Q96PY5 1086 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 PLEKHF1Q96S99 279 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 CYP46A1Q9Y6A2 500 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 SBNO1A3KN83 1393 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 SYNE3Q6ZMZ3 975 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 CCDC8Q9H0W5 538 aaPredicted RBP10.68□□□□□ -0.7
NLRP3-204ENST00000366497 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 ARHGAP31Q2M1Z3 1444 aa10.68□□□□□ -0.7
NLRP3-204ENST00000366497 HSPA2P54652 639 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 CHAF1AQ13111 956 aaPredicted RBP10.67□□□□□ -0.7
NLRP3-204ENST00000366497 G2E3Q7L622 706 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 NPHP3Q7Z494 1330 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 BOLA2Q9H3K6 86 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 MAP3K4Q9Y6R4 1608 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 SDSP20132 328 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 MRE11P49959 708 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 CCDC158Q5M9N0 1113 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 CEP85Q6P2H3 762 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 BICD2Q8TD16 824 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 TMOD3Q9NYL9 352 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 TSPOAP1O95153 1857 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 MAP3K5Q99683 1374 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 A0A087WZG4 1122 aa10.67□□□□□ -0.7
NLRP3-204ENST00000366497 RNF17Q9BXT8 1623 aaKnown RBP10.67□□□□□ -0.7
NLRP3-204ENST00000366497 JAKMIP1Q96N16 626 aaKnown RBP10.66□□□□□ -0.7
NLRP3-204ENST00000366497 FKBP4Q02790 459 aaKnown RBP eCLIP10.66□□□□□ -0.7
NLRP3-204ENST00000366497 BRPF3Q9ULD4 1205 aa10.66□□□□□ -0.7
NLRP3-204ENST00000366497 ABCA9Q8IUA7 1624 aa10.66□□□□□ -0.7
NLRP3-204ENST00000366497 ATP5J2-PTCD1G3V325 749 aa10.66□□□□□ -0.7
NLRP3-204ENST00000366497 STARD3NLO95772 234 aa10.66□□□□□ -0.7
NLRP3-204ENST00000366497 PDE1AP54750 535 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 TTC39AQ5SRH9 613 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 MSH6P52701 1360 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 NFXL1Q6ZNB6 911 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 RHPN1Q8TCX5 695 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 JARID2Q92833 1246 aaPredicted RBP10.65□□□□□ -0.7
NLRP3-204ENST00000366497 ROBO2Q9HCK4 1378 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 FIBPO43427 364 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 SNRPA1P09661 255 aaKnown RBP10.65□□□□□ -0.7
NLRP3-204ENST00000366497 ATP8B2P98198 1209 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 AKAP17AQ02040 695 aaKnown RBP10.65□□□□□ -0.7
NLRP3-204ENST00000366497 BLOC1S2Q6QNY1 142 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 UBE3BQ7Z3V4 1068 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 RNF214Q8ND24 703 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 ZBTB3Q9H5J0 574 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 PHAXQ9H814 394 aaKnown RBP10.65□□□□□ -0.7
NLRP3-204ENST00000366497 TBC1D2BQ9UPU7 963 aa10.65□□□□□ -0.7
NLRP3-204ENST00000366497 SPHKAPQ2M3C7 1700 aa10.65□□□□□ -0.71
NLRP3-204ENST00000366497 PDCP20941 246 aa10.65□□□□□ -0.71
NLRP3-204ENST00000366497 PRR36Q9H6K5 1346 aa10.64□□□□□ -0.71
NLRP3-204ENST00000366497 E9PCH4 1651 aa10.64□□□□□ -0.71
NLRP3-204ENST00000366497 MBD3O95983 291 aa10.64□□□□□ -0.71
NLRP3-204ENST00000366497 STK3Q13188 491 aa10.64□□□□□ -0.71
NLRP3-204ENST00000366497 ANKRD13DQ6ZTN6 518 aa10.64□□□□□ -0.71
NLRP3-204ENST00000366497 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
NLRP3-204ENST00000366497 ECHDC1Q9NTX5 307 aa10.64□□□□□ -0.71
NLRP3-204ENST00000366497 TULP1O00294 542 aaPredicted RBP10.64□□□□□ -0.71
NLRP3-204ENST00000366497 PIP4K2BP78356 416 aa10.64□□□□□ -0.71
NLRP3-204ENST00000366497 NFATC2IPQ8NCF5 419 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms