RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 CCDC192P0DO97 292 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 IFNL2Q8IZJ0 200 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 SYCP1Q15431 976 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 BOLA2Q9H3K6 86 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 A0A087WZG4 1122 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 F6X3S4 739 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 ACBD3Q9H3P7 528 aa12.17□□□□□ -0.46
ZNF548-202ENST00000366197 TTLL5Q6EMB2 1281 aa12.16□□□□□ -0.46
ZNF548-202ENST00000366197 TNMDQ9H2S6 317 aa12.16□□□□□ -0.46
ZNF548-202ENST00000366197 RDXP35241 583 aaKnown RBP12.16□□□□□ -0.46
ZNF548-202ENST00000366197 KRI1Q8N9T8 703 aaKnown RBP12.16□□□□□ -0.46
ZNF548-202ENST00000366197 WASF1Q92558 559 aa12.16□□□□□ -0.46
ZNF548-202ENST00000366197 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
ZNF548-202ENST00000366197 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.16□□□□□ -0.46
ZNF548-202ENST00000366197 ZNHIT6Q9NWK9 470 aaKnown RBP12.16□□□□□ -0.46
ZNF548-202ENST00000366197 NOS1P29475 1434 aa12.16□□□□□ -0.46
ZNF548-202ENST00000366197 HSP90AB2PQ58FF8 381 aa12.16□□□□□ -0.46
ZNF548-202ENST00000366197 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
ZNF548-202ENST00000366197 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
ZNF548-202ENST00000366197 PLCH2O75038 1416 aa12.16□□□□□ -0.46
ZNF548-202ENST00000366197 HSP90B2PQ58FF3 399 aa12.16□□□□□ -0.46
ZNF548-202ENST00000366197 SERPINC1P01008 464 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 TEX35Q5T0J7 233 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 ACEP12821 1306 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 SSBP05455 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
ZNF548-202ENST00000366197 MAP3K12Q12852 859 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 CAGE1Q8TC20 777 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 PDCL3Q9H2J4 239 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 ANKIB1Q9P2G1 1089 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 USP5P45974 858 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 FLIIQ13045 1269 aa12.15□□□□□ -0.46
ZNF548-202ENST00000366197 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.47
ZNF548-202ENST00000366197 SPATA32Q96LK8 384 aa12.15□□□□□ -0.47
ZNF548-202ENST00000366197 NAPBQ9H115 298 aa12.15□□□□□ -0.47
ZNF548-202ENST00000366197 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.47
ZNF548-202ENST00000366197 MSH6P52701 1360 aa12.14□□□□□ -0.47
ZNF548-202ENST00000366197 AK7Q96M32 723 aa12.14□□□□□ -0.47
ZNF548-202ENST00000366197 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
ZNF548-202ENST00000366197 POLR3DP05423 398 aaPredicted RBP12.14□□□□□ -0.47
ZNF548-202ENST00000366197 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
ZNF548-202ENST00000366197 PTPN23Q9H3S7 1636 aa12.14□□□□□ -0.47
ZNF548-202ENST00000366197 NCKAP5LQ9HCH0 1330 aa12.14□□□□□ -0.47
ZNF548-202ENST00000366197 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
ZNF548-202ENST00000366197 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
ZNF548-202ENST00000366197 ANKRD18BA2A2Z9 1011 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 LRRFIP2Q9Y608 721 aaKnown RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 NSD2O96028 1365 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 ZNF76P36508 570 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 CRACR2BQ8N4Y2 399 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 PAF1Q8N7H5 531 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 UPF3BQ9BZI7 483 aaKnown RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 LUC7LQ9NQ29 371 aaKnown RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 DHX8Q14562 1220 aaKnown RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 CCDC8Q9H0W5 538 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 MAP3K1Q13233 1512 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 CCP110O43303 1012 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 SMARCA5O60264 1052 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-202ENST00000366197 GPTP24298 496 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 PIBF1Q8WXW3 757 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
ZNF548-202ENST00000366197 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
ZNF548-202ENST00000366197 SLC5A1P13866 664 aa12.12□□□□□ -0.47
ZNF548-202ENST00000366197 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
ZNF548-202ENST00000366197 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
ZNF548-202ENST00000366197 PTPRCP08575 1304 aa12.12□□□□□ -0.47
ZNF548-202ENST00000366197 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-202ENST00000366197 CHRNA2Q15822 529 aa12.12□□□□□ -0.47
ZNF548-202ENST00000366197 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
ZNF548-202ENST00000366197 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
ZNF548-202ENST00000366197 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
ZNF548-202ENST00000366197 ANKRD24Q8TF21 1146 aa12.11□□□□□ -0.47
ZNF548-202ENST00000366197 RPGRQ92834 1020 aaKnown RBP12.11□□□□□ -0.47
ZNF548-202ENST00000366197 MPHOSPH10O00566 681 aaKnown RBP12.11□□□□□ -0.47
ZNF548-202ENST00000366197 IQCA1Q86XH1 822 aa12.11□□□□□ -0.47
ZNF548-202ENST00000366197 MYO6Q9UM54 1294 aa12.11□□□□□ -0.47
ZNF548-202ENST00000366197 LMTK3Q96Q04 1460 aa12.11□□□□□ -0.47
ZNF548-202ENST00000366197 CEP57L1Q8IYX8 460 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 CTCFLQ8NI51 663 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-202ENST00000366197 ABCC2Q92887 1545 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 TRIM27P14373 513 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 DEF6Q9H4E7 631 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
ZNF548-202ENST00000366197 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 C6orf229H3BNL8 230 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 SNRPA1P09661 255 aaKnown RBP12.1□□□□□ -0.47
ZNF548-202ENST00000366197 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
ZNF548-202ENST00000366197 ZNF771Q7L3S4 317 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-202ENST00000366197 FERMT3Q86UX7 667 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 ZNF444Q8N0Y2 327 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-202ENST00000366197 SPC24Q8NBT2 197 aa12.1□□□□□ -0.47
ZNF548-202ENST00000366197 ERCC4Q92889 916 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-202ENST00000366197 RPRD2Q5VT52 1461 aaKnown RBP12.1□□□□□ -0.47
ZNF548-202ENST00000366197 SLF2Q8IX21 1173 aa12.09□□□□□ -0.47
ZNF548-202ENST00000366197 NUP62CLQ9H1M0 184 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms