RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 CDC45O75419 566 aa19.93■□□□□ 0.78
IFT140-201ENST00000361339 ANP32BQ92688 251 aaKnown RBP19.93■□□□□ 0.78
IFT140-201ENST00000361339 FMN2Q9NZ56 1722 aa19.92■□□□□ 0.78
IFT140-201ENST00000361339 SETD1BQ9UPS6 1966 aaKnown RBP19.92■□□□□ 0.78
IFT140-201ENST00000361339 SDSP20132 328 aa19.92■□□□□ 0.78
IFT140-201ENST00000361339 GBP4Q96PP9 640 aa19.92■□□□□ 0.78
IFT140-201ENST00000361339 PTPRCP08575 1304 aa19.91■□□□□ 0.78
IFT140-201ENST00000361339 FKBP5Q13451 457 aaPredicted RBP19.91■□□□□ 0.78
IFT140-201ENST00000361339 DDX49Q9Y6V7 483 aaKnown RBP19.91■□□□□ 0.78
IFT140-201ENST00000361339 SSFA2P28290 1259 aa19.9■□□□□ 0.78
IFT140-201ENST00000361339 PRDM10Q9NQV6 1147 aa19.9■□□□□ 0.78
IFT140-201ENST00000361339 DDIT3P35638 169 aa19.9■□□□□ 0.78
IFT140-201ENST00000361339 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
IFT140-201ENST00000361339 FER1L4A9Z1Z3 1794 aa19.9■□□□□ 0.78
IFT140-201ENST00000361339 GNAT3A8MTJ3 354 aa19.89■□□□□ 0.78
IFT140-201ENST00000361339 RPAP2Q8IXW5 612 aaPredicted RBP19.89■□□□□ 0.78
IFT140-201ENST00000361339 PNMA6EA0A0J9YXQ4 647 aa19.89■□□□□ 0.77
IFT140-201ENST00000361339 FLIIQ13045 1269 aa19.89■□□□□ 0.77
IFT140-201ENST00000361339 LRRC59Q96AG4 307 aaKnown RBP19.89■□□□□ 0.77
IFT140-201ENST00000361339 PHAXQ9H814 394 aaKnown RBP19.89■□□□□ 0.77
IFT140-201ENST00000361339 KIF24Q5T7B8 1368 aa19.88■□□□□ 0.77
IFT140-201ENST00000361339 SNX21Q969T3 373 aa19.88■□□□□ 0.77
IFT140-201ENST00000361339 LGR6Q9HBX8 967 aa19.88■□□□□ 0.77
IFT140-201ENST00000361339 NWD1Q149M9 1564 aa19.88■□□□□ 0.77
IFT140-201ENST00000361339 KCNQ3O43525 872 aa19.87■□□□□ 0.77
IFT140-201ENST00000361339 ANXA1P04083 346 aa19.87■□□□□ 0.77
IFT140-201ENST00000361339 NBPF6Q5VWK0 638 aa19.87■□□□□ 0.77
IFT140-201ENST00000361339 NBPF4Q96M43 638 aa19.87■□□□□ 0.77
IFT140-201ENST00000361339 NCOA3Q9Y6Q9 1424 aa19.87■□□□□ 0.77
IFT140-201ENST00000361339 ZSCAN30Q86W11 494 aa19.86■□□□□ 0.77
IFT140-201ENST00000361339 PHF8Q9UPP1 1060 aa19.86■□□□□ 0.77
IFT140-201ENST00000361339 STK31Q9BXU1 1019 aa19.86■□□□□ 0.77
IFT140-201ENST00000361339 MARF1Q9Y4F3 1742 aaKnown RBP19.86■□□□□ 0.77
IFT140-201ENST00000361339 EIF2S2P20042 333 aaKnown RBP19.86■□□□□ 0.77
IFT140-201ENST00000361339 ESCO1Q5FWF5 840 aa19.86■□□□□ 0.77
IFT140-201ENST00000361339 XRN1Q8IZH2 1706 aaKnown RBP19.85■□□□□ 0.77
IFT140-201ENST00000361339 HAP1P54257 671 aaPredicted RBP19.84■□□□□ 0.77
IFT140-201ENST00000361339 USP26Q9BXU7 913 aa19.84■□□□□ 0.77
IFT140-201ENST00000361339 K7ELQ4 463 aaPredicted RBP19.83■□□□□ 0.77
IFT140-201ENST00000361339 CAVIN1Q6NZI2 390 aaKnown RBP19.83■□□□□ 0.77
IFT140-201ENST00000361339 LRRFIP2Q9Y608 721 aaKnown RBP19.83■□□□□ 0.77
IFT140-201ENST00000361339 CCDC173Q0VFZ6 552 aa19.83■□□□□ 0.77
IFT140-201ENST00000361339 MPNDQ8N594 471 aa19.83■□□□□ 0.77
IFT140-201ENST00000361339 MAP3K5Q99683 1374 aa19.83■□□□□ 0.76
IFT140-201ENST00000361339 MCTP1Q6DN14 999 aa19.83■□□□□ 0.76
IFT140-201ENST00000361339 LMOD2Q6P5Q4 547 aa19.83■□□□□ 0.76
IFT140-201ENST00000361339 ORAI2Q96SN7 254 aa19.83■□□□□ 0.76
IFT140-201ENST00000361339 CCT4P50991 539 aaKnown RBP19.82■□□□□ 0.76
IFT140-201ENST00000361339 RAB3GAP1Q15042 981 aa19.82■□□□□ 0.76
IFT140-201ENST00000361339 GNAI2P04899 355 aa19.81■□□□□ 0.76
IFT140-201ENST00000361339 FOXD4L5Q5VV16 416 aaPredicted RBP19.81■□□□□ 0.76
IFT140-201ENST00000361339 FOXD4L4Q8WXT5 416 aaPredicted RBP19.81■□□□□ 0.76
IFT140-201ENST00000361339 ZHX1Q9UKY1 873 aaPredicted RBP19.81■□□□□ 0.76
IFT140-201ENST00000361339 OFD1O75665 1012 aa19.81■□□□□ 0.76
IFT140-201ENST00000361339 PDE1AP54750 535 aa19.81■□□□□ 0.76
IFT140-201ENST00000361339 TAF7Q15545 349 aaPredicted RBP19.81■□□□□ 0.76
IFT140-201ENST00000361339 CCDC30Q5VVM6 783 aa19.81■□□□□ 0.76
IFT140-201ENST00000361339 PKP1Q13835 747 aa19.8■□□□□ 0.76
IFT140-201ENST00000361339 CHAMP1Q96JM3 812 aa19.8■□□□□ 0.76
IFT140-201ENST00000361339 UQCRHLA0A096LP55 91 aa19.8■□□□□ 0.76
IFT140-201ENST00000361339 GOLGA6L22H0YM25 854 aa19.8■□□□□ 0.76
IFT140-201ENST00000361339 UQCRHP07919 91 aa19.8■□□□□ 0.76
IFT140-201ENST00000361339 HDGFL1Q5TGJ6 251 aa19.8■□□□□ 0.76
IFT140-201ENST00000361339 IL1RAPL2Q9NP60 686 aa19.8■□□□□ 0.76
IFT140-201ENST00000361339 PSME1Q06323 249 aa19.8■□□□□ 0.76
IFT140-201ENST00000361339 SKOR2Q2VWA4 1001 aaPredicted RBP19.8■□□□□ 0.76
IFT140-201ENST00000361339 MPRIPQ6WCQ1 1025 aa19.79■□□□□ 0.76
IFT140-201ENST00000361339 USP44Q9H0E7 712 aa19.79■□□□□ 0.76
IFT140-201ENST00000361339 ISY1Q9ULR0 285 aaKnown RBP19.79■□□□□ 0.76
IFT140-201ENST00000361339 AK9Q5TCS8 1911 aa19.79■□□□□ 0.76
IFT140-201ENST00000361339 TPRNQ4KMQ1 711 aa19.78■□□□□ 0.76
IFT140-201ENST00000361339 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.78■□□□□ 0.76
IFT140-201ENST00000361339 UNC5CLQ8IV45 518 aa19.78■□□□□ 0.76
IFT140-201ENST00000361339 ANKARQ7Z5J8 1434 aa19.78■□□□□ 0.76
IFT140-201ENST00000361339 RBM27Q9P2N5 1060 aaKnown RBP19.77■□□□□ 0.76
IFT140-201ENST00000361339 PRAMEF22A3QJZ6 481 aa19.77■□□□□ 0.76
IFT140-201ENST00000361339 HMMRO75330 724 aa19.77■□□□□ 0.76
IFT140-201ENST00000361339 JARID2Q92833 1246 aaPredicted RBP19.77■□□□□ 0.76
IFT140-201ENST00000361339 MAP4K4O95819 1239 aaPredicted RBP19.77■□□□□ 0.75
IFT140-201ENST00000361339 PRDM4Q9UKN5 801 aa19.77■□□□□ 0.75
IFT140-201ENST00000361339 ANKLE2Q86XL3 938 aa19.76■□□□□ 0.75
IFT140-201ENST00000361339 ZGPATQ8N5A5 531 aaKnown RBP19.76■□□□□ 0.75
IFT140-201ENST00000361339 CHPF2Q9P2E5 772 aa19.76■□□□□ 0.75
IFT140-201ENST00000361339 IP6K1Q92551 441 aa19.76■□□□□ 0.75
IFT140-201ENST00000361339 IL25Q9H293 177 aa19.76■□□□□ 0.75
IFT140-201ENST00000361339 RNF214Q8ND24 703 aa19.75■□□□□ 0.75
IFT140-201ENST00000361339 NUTM1Q86Y26 1132 aa19.75■□□□□ 0.75
IFT140-201ENST00000361339 RILPL2Q969X0 211 aa19.75■□□□□ 0.75
IFT140-201ENST00000361339 LRRC37A3O60309 1634 aa19.75■□□□□ 0.75
IFT140-201ENST00000361339 HTATSF1O43719 755 aaKnown RBP19.74■□□□□ 0.75
IFT140-201ENST00000361339 BAG4O95429 457 aaKnown RBP19.74■□□□□ 0.75
IFT140-201ENST00000361339 NBPF7P0C2Y1 421 aaPredicted RBP19.74■□□□□ 0.75
IFT140-201ENST00000361339 RBSNQ9H1K0 784 aa19.74■□□□□ 0.75
IFT140-201ENST00000361339 LRRCC1Q9C099 1032 aa19.74■□□□□ 0.75
IFT140-201ENST00000361339 FAM208AQ9UK61 1670 aaKnown RBP19.74■□□□□ 0.75
IFT140-201ENST00000361339 ATP8B2P98198 1209 aa19.74■□□□□ 0.75
IFT140-201ENST00000361339 NOL8Q76FK4 1167 aaKnown RBP19.74■□□□□ 0.75
IFT140-201ENST00000361339 PPP1R9BQ96SB3 815 aa19.74■□□□□ 0.75
IFT140-201ENST00000361339 SALL3Q9BXA9 1300 aa19.73■□□□□ 0.75
IFT140-201ENST00000361339 RGPD2P0DJD1 1756 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms