RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 ZNF518AQ6AHZ1 1483 aa16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 CCDC57Q2TAC2 916 aa16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
PCMTD1-201ENST00000360540 NUTM2BA6NNL0 878 aaPredicted RBP16.8■□□□□ 0.28
PCMTD1-201ENST00000360540 NUTM2EB1AL46 878 aaPredicted RBP16.8■□□□□ 0.28
PCMTD1-201ENST00000360540 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
PCMTD1-201ENST00000360540 NUTM2AQ8IVF1 878 aaPredicted RBP16.8■□□□□ 0.28
PCMTD1-201ENST00000360540 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
PCMTD1-201ENST00000360540 ZBTB3Q9H5J0 574 aa16.8■□□□□ 0.28
PCMTD1-201ENST00000360540 CEP126Q9P2H0 1117 aa16.8■□□□□ 0.28
PCMTD1-201ENST00000360540 RAB11FIP3O75154 756 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 SMC5Q8IY18 1101 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 BAG4O95429 457 aaKnown RBP16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 ME1P48163 572 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 GUCY1B3Q02153 619 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 ANKRD44Q8N8A2 993 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 EYA1Q99502 592 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 PTPRCP08575 1304 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 MBD5Q9P267 1494 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 HIP1O00291 1037 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 PDE1AP54750 535 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 KRT85P78386 507 aa16.79■□□□□ 0.28
PCMTD1-201ENST00000360540 ERICH2A1L162 156 aa16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 CCDC158Q5M9N0 1113 aa16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 KIF6Q6ZMV9 814 aa16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 TFIP11Q9UBB9 837 aaKnown RBP16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 PA2G4Q9UQ80 394 aaKnown RBP16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 A0A087WZG4 1122 aa16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 SNRKQ9NRH2 765 aa16.78■□□□□ 0.28
PCMTD1-201ENST00000360540 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
PCMTD1-201ENST00000360540 IDH1O75874 414 aaKnown RBP16.77■□□□□ 0.28
PCMTD1-201ENST00000360540 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
PCMTD1-201ENST00000360540 ARHGAP45Q92619 1136 aa16.77■□□□□ 0.28
PCMTD1-201ENST00000360540 ZBTB7BO15156 539 aaPredicted RBP16.77■□□□□ 0.27
PCMTD1-201ENST00000360540 STK38Q15208 465 aa16.77■□□□□ 0.27
PCMTD1-201ENST00000360540 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.27
PCMTD1-201ENST00000360540 TNMDQ9H2S6 317 aa16.76■□□□□ 0.27
PCMTD1-201ENST00000360540 PHAXQ9H814 394 aaKnown RBP16.76■□□□□ 0.27
PCMTD1-201ENST00000360540 RIMS2Q9UQ26 1411 aa16.76■□□□□ 0.27
PCMTD1-201ENST00000360540 TMX4Q9H1E5 349 aaPredicted RBP16.76■□□□□ 0.27
PCMTD1-201ENST00000360540 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
PCMTD1-201ENST00000360540 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCMTD1-201ENST00000360540 ZGPATQ8N5A5 531 aaKnown RBP16.76■□□□□ 0.27
PCMTD1-201ENST00000360540 RHPN1Q8TCX5 695 aa16.76■□□□□ 0.27
PCMTD1-201ENST00000360540 TNRQ92752 1358 aa16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 SPATA32Q96LK8 384 aa16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 CEP85Q6P2H3 762 aa16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 PTPRTO14522 1441 aa16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 GPTP24298 496 aa16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 NECAB1Q8N987 351 aa16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
PCMTD1-201ENST00000360540 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 RAB11FIP4Q86YS3 637 aa16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 KCNA6P17658 529 aa16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 PLEKHM2Q8IWE5 1019 aa16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 CWF19L2Q2TBE0 894 aaKnown RBP16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 BICDL1Q6ZP65 573 aa16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
PCMTD1-201ENST00000360540 PIBF1Q8WXW3 757 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 ECHDC1Q9NTX5 307 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 YTHDC2Q9H6S0 1430 aaKnown RBP16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 SMC2O95347 1197 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 FILIP1Q7Z7B0 1213 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 PDILTQ8N807 584 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 CKAP2LQ8IYA6 745 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 LRRC2Q9BYS8 371 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
PCMTD1-201ENST00000360540 POGZQ7Z3K3 1410 aa16.72■□□□□ 0.27
PCMTD1-201ENST00000360540 CCDC192P0DO97 292 aa16.72■□□□□ 0.27
PCMTD1-201ENST00000360540 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
PCMTD1-201ENST00000360540 IL13P35225 146 aa16.72■□□□□ 0.27
PCMTD1-201ENST00000360540 NUP133Q8WUM0 1156 aa16.72■□□□□ 0.27
PCMTD1-201ENST00000360540 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
PCMTD1-201ENST00000360540 NPATQ14207 1427 aa16.72■□□□□ 0.27
PCMTD1-201ENST00000360540 TPM3P06753 285 aa16.72■□□□□ 0.27
PCMTD1-201ENST00000360540 AMOTQ4VCS5 1084 aa16.71■□□□□ 0.27
PCMTD1-201ENST00000360540 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
PCMTD1-201ENST00000360540 USP25Q9UHP3 1055 aa16.71■□□□□ 0.27
PCMTD1-201ENST00000360540 CPA1P15085 419 aa16.71■□□□□ 0.27
PCMTD1-201ENST00000360540 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
PCMTD1-201ENST00000360540 ABCF2Q9UG63 623 aa16.71■□□□□ 0.27
PCMTD1-201ENST00000360540 UGGT1Q9NYU2 1555 aa16.71■□□□□ 0.27
PCMTD1-201ENST00000360540 COPS6Q7L5N1 327 aa16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 PCMTD1Q96MG8 357 aaPredicted RBP16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 LIMCH1Q9UPQ0 1083 aa16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms