RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 USHBP1Q8N6Y0 703 aa32.59■■■□□ 2.81
CUEDC1-201ENST00000360238 PSME1Q06323 249 aa32.58■■■□□ 2.81
CUEDC1-201ENST00000360238 SLIT3O75094 1523 aa32.57■■■□□ 2.8
CUEDC1-201ENST00000360238 NPHP4O75161 1426 aaPredicted RBP32.57■■■□□ 2.8
CUEDC1-201ENST00000360238 APBB1O00213 710 aa32.56■■■□□ 2.8
CUEDC1-201ENST00000360238 ESCO1Q5FWF5 840 aa32.56■■■□□ 2.8
CUEDC1-201ENST00000360238 CD2BP2O95400 341 aaKnown RBP32.55■■■□□ 2.8
CUEDC1-201ENST00000360238 RABEP1Q15276 862 aa32.55■■■□□ 2.8
CUEDC1-201ENST00000360238 NBPF6Q5VWK0 638 aa32.55■■■□□ 2.8
CUEDC1-201ENST00000360238 NBPF4Q96M43 638 aa32.55■■■□□ 2.8
CUEDC1-201ENST00000360238 USP26Q9BXU7 913 aa32.54■■■□□ 2.8
CUEDC1-201ENST00000360238 NCAPD2Q15021 1401 aa32.53■■■□□ 2.8
CUEDC1-201ENST00000360238 DDX11L8A8MPP1 907 aa32.53■■■□□ 2.8
CUEDC1-201ENST00000360238 HOXB7P09629 217 aa32.53■■■□□ 2.8
CUEDC1-201ENST00000360238 HDGFL1Q5TGJ6 251 aa32.53■■■□□ 2.8
CUEDC1-201ENST00000360238 CAMTA1Q9Y6Y1 1673 aa32.52■■■□□ 2.8
CUEDC1-201ENST00000360238 NECTIN2Q92692 538 aa32.52■■■□□ 2.8
CUEDC1-201ENST00000360238 ATP8B2P98198 1209 aa32.52■■■□□ 2.8
CUEDC1-201ENST00000360238 RBM33Q96EV2 1170 aaKnown RBP32.52■■■□□ 2.8
CUEDC1-201ENST00000360238 PDE1AP54750 535 aa32.51■■■□□ 2.8
CUEDC1-201ENST00000360238 RBM42Q9BTD8 480 aaKnown RBP32.51■■■□□ 2.8
CUEDC1-201ENST00000360238 TRPM3Q9HCF6 1732 aaPredicted RBP32.51■■■□□ 2.79
CUEDC1-201ENST00000360238 IL27Q8NEV9 243 aa32.51■■■□□ 2.79
CUEDC1-201ENST00000360238 CHMP4AQ9BY43 222 aa32.51■■■□□ 2.79
CUEDC1-201ENST00000360238 SALL3Q9BXA9 1300 aa32.5■■■□□ 2.79
CUEDC1-201ENST00000360238 IBTKQ9P2D0 1353 aaPredicted RBP32.49■■■□□ 2.79
CUEDC1-201ENST00000360238 HSP90AA1P07900 732 aaKnown RBP32.49■■■□□ 2.79
CUEDC1-201ENST00000360238 RAB3GAP1Q15042 981 aa32.49■■■□□ 2.79
CUEDC1-201ENST00000360238 LRRCC1Q9C099 1032 aa32.49■■■□□ 2.79
CUEDC1-201ENST00000360238 BRPF3Q9ULD4 1205 aa32.49■■■□□ 2.79
CUEDC1-201ENST00000360238 OVOS2A0A0G2JMS6 1433 aa32.48■■■□□ 2.79
CUEDC1-201ENST00000360238 REC8O95072 547 aa32.48■■■□□ 2.79
CUEDC1-201ENST00000360238 KIF1AQ12756 1690 aa32.48■■■□□ 2.79
CUEDC1-201ENST00000360238 EXOC6BQ9Y2D4 811 aa32.48■■■□□ 2.79
CUEDC1-201ENST00000360238 EIF4A1P60842 406 aaKnown RBP32.46■■■□□ 2.79
CUEDC1-201ENST00000360238 AKAP4Q5JQC9 854 aa32.46■■■□□ 2.79
CUEDC1-201ENST00000360238 PNMA6EA0A0J9YXQ4 647 aa32.45■■■□□ 2.79
CUEDC1-201ENST00000360238 L1TD1Q5T7N2 865 aaKnown RBP32.45■■■□□ 2.79
CUEDC1-201ENST00000360238 TNPO1Q92973 898 aaKnown RBP32.45■■■□□ 2.78
CUEDC1-201ENST00000360238 USP44Q9H0E7 712 aa32.45■■■□□ 2.78
CUEDC1-201ENST00000360238 LRRFIP2Q9Y608 721 aaKnown RBP32.45■■■□□ 2.78
CUEDC1-201ENST00000360238 ERC2O15083 957 aa32.43■■■□□ 2.78
CUEDC1-201ENST00000360238 TRAK2O60296 914 aa32.43■■■□□ 2.78
CUEDC1-201ENST00000360238 UBTFL1P0CB47 393 aaPredicted RBP32.43■■■□□ 2.78
CUEDC1-201ENST00000360238 PLEKHO1Q53GL0 409 aaPredicted RBP32.43■■■□□ 2.78
CUEDC1-201ENST00000360238 GBP4Q96PP9 640 aa32.43■■■□□ 2.78
CUEDC1-201ENST00000360238 AMOTQ4VCS5 1084 aa32.43■■■□□ 2.78
CUEDC1-201ENST00000360238 ARHGEF25Q86VW2 580 aa32.43■■■□□ 2.78
CUEDC1-201ENST00000360238 LGR6Q9HBX8 967 aa32.42■■■□□ 2.78
CUEDC1-201ENST00000360238 LMTK3Q96Q04 1460 aa32.42■■■□□ 2.78
CUEDC1-201ENST00000360238 GCP02774 474 aa32.41■■■□□ 2.78
CUEDC1-201ENST00000360238 ZNF530Q6P9A1 599 aaPredicted RBP32.41■■■□□ 2.78
CUEDC1-201ENST00000360238 PHAXQ9H814 394 aaKnown RBP32.41■■■□□ 2.78
CUEDC1-201ENST00000360238 MX1P20591 662 aa32.41■■■□□ 2.78
CUEDC1-201ENST00000360238 LRRC59Q96AG4 307 aaKnown RBP32.4■■■□□ 2.78
CUEDC1-201ENST00000360238 ZBTB7CA1YPR0 619 aa32.39■■■□□ 2.78
CUEDC1-201ENST00000360238 TEFQ10587 303 aa32.39■■■□□ 2.78
CUEDC1-201ENST00000360238 ORAI2Q96SN7 254 aa32.39■■■□□ 2.78
CUEDC1-201ENST00000360238 SRCIN1Q9C0H9 1055 aa32.39■■■□□ 2.78
CUEDC1-201ENST00000360238 SIPA1L3O60292 1781 aaPredicted RBP32.39■■■□□ 2.78
CUEDC1-201ENST00000360238 PTMSP20962 102 aa32.39■■■□□ 2.78
CUEDC1-201ENST00000360238 SSH3Q8TE77 659 aa32.39■■■□□ 2.78
CUEDC1-201ENST00000360238 PXDNQ92626 1479 aa32.38■■■□□ 2.77
CUEDC1-201ENST00000360238 AOX1Q06278 1338 aa32.38■■■□□ 2.77
CUEDC1-201ENST00000360238 STAP2Q9UGK3 403 aa32.38■■■□□ 2.77
CUEDC1-201ENST00000360238 MST1RQ04912 1400 aa32.38■■■□□ 2.77
CUEDC1-201ENST00000360238 ADAMTS7Q9UKP4 1686 aa32.37■■■□□ 2.77
CUEDC1-201ENST00000360238 BTBD11A6QL63 1104 aa32.35■■■□□ 2.77
CUEDC1-201ENST00000360238 CHPF2Q9P2E5 772 aa32.35■■■□□ 2.77
CUEDC1-201ENST00000360238 ST18O60284 1047 aa32.35■■■□□ 2.77
CUEDC1-201ENST00000360238 EIF2S2P20042 333 aaKnown RBP32.35■■■□□ 2.77
CUEDC1-201ENST00000360238 ALS2Q96Q42 1657 aa32.34■■■□□ 2.77
CUEDC1-201ENST00000360238 FSD2A1L4K1 749 aa32.34■■■□□ 2.77
CUEDC1-201ENST00000360238 FOXD4L1Q9NU39 408 aa32.34■■■□□ 2.77
CUEDC1-201ENST00000360238 C1orf141Q5JVX7 400 aa32.34■■■□□ 2.77
CUEDC1-201ENST00000360238 RAB11FIP3O75154 756 aa32.33■■■□□ 2.77
CUEDC1-201ENST00000360238 POLA2Q14181 598 aa32.33■■■□□ 2.77
CUEDC1-201ENST00000360238 ANKRD24Q8TF21 1146 aa32.33■■■□□ 2.77
CUEDC1-201ENST00000360238 RGPD5Q99666 1765 aa32.33■■■□□ 2.77
CUEDC1-201ENST00000360238 RNMTO43148 476 aaKnown RBP32.32■■■□□ 2.76
CUEDC1-201ENST00000360238 CLEC17AQ6ZS10 378 aa32.32■■■□□ 2.76
CUEDC1-201ENST00000360238 DNAAF4Q8WXU2 420 aa32.32■■■□□ 2.76
CUEDC1-201ENST00000360238 AK9Q5TCS8 1911 aa32.32■■■□□ 2.76
CUEDC1-201ENST00000360238 C1orf167Q5SNV9 1468 aa32.31■■■□□ 2.76
CUEDC1-201ENST00000360238 GOLGA6L3A6NEY3 463 aa32.31■■■□□ 2.76
CUEDC1-201ENST00000360238 MPRIPQ6WCQ1 1025 aa32.31■■■□□ 2.76
CUEDC1-201ENST00000360238 KCNQ3O43525 872 aa32.31■■■□□ 2.76
CUEDC1-201ENST00000360238 XPCQ01831 940 aaPredicted RBP32.31■■■□□ 2.76
CUEDC1-201ENST00000360238 BEND3Q5T5X7 828 aa32.31■■■□□ 2.76
CUEDC1-201ENST00000360238 ESYT1Q9BSJ8 1104 aa32.3■■■□□ 2.76
CUEDC1-201ENST00000360238 TSHZ3Q63HK5 1081 aa32.29■■■□□ 2.76
CUEDC1-201ENST00000360238 SKOR2Q2VWA4 1001 aaPredicted RBP32.29■■■□□ 2.76
CUEDC1-201ENST00000360238 HEG1Q9ULI3 1381 aa32.29■■■□□ 2.76
CUEDC1-201ENST00000360238 ADCY9O60503 1353 aa32.28■■■□□ 2.76
CUEDC1-201ENST00000360238 PPP1R42Q7Z4L9 355 aa32.28■■■□□ 2.76
CUEDC1-201ENST00000360238 PI4KAP2A4QPH2 592 aa32.28■■■□□ 2.76
CUEDC1-201ENST00000360238 PI4KAP1Q8N8J0 262 aa32.28■■■□□ 2.76
CUEDC1-201ENST00000360238 GZF1Q9H116 711 aaPredicted RBP32.28■■■□□ 2.76
CUEDC1-201ENST00000360238 DBF4Q9UBU7 674 aaPredicted RBP32.28■■■□□ 2.76
CUEDC1-201ENST00000360238 KRT28Q7Z3Y7 464 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms