RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 HOMER1Q86YM7 354 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 STK38Q15208 465 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 AIDAQ96BJ3 306 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 RSPH6AQ9H0K4 717 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 TMOD2Q9NZR1 351 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 MAGEC2Q9UBF1 373 aaPredicted RBP5.75□□□□□ -1.49
SCN3A-202ENST00000360093 CCDC39Q9UFE4 941 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 MX1P20591 662 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 NCBP3Q53F19 620 aaKnown RBP5.75□□□□□ -1.49
SCN3A-202ENST00000360093 EMILIN1Q9Y6C2 1016 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 TARBP1Q13395 1621 aaKnown RBP5.75□□□□□ -1.49
SCN3A-202ENST00000360093 SNRPA1P09661 255 aaKnown RBP5.75□□□□□ -1.49
SCN3A-202ENST00000360093 TTF1Q15361 905 aaPredicted RBP5.75□□□□□ -1.49
SCN3A-202ENST00000360093 FAM13BQ9NYF5 915 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 CEP131Q9UPN4 1083 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 PTPRKQ15262 1439 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 C11orf95C9JLR9 678 aaPredicted RBP5.75□□□□□ -1.49
SCN3A-202ENST00000360093 SLC5A1P13866 664 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 MAP3K12Q12852 859 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 NGLY1Q96IV0 654 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 PDRG1Q9NUG6 133 aa5.75□□□□□ -1.49
SCN3A-202ENST00000360093 ZMYM3Q14202 1370 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 TRAK2O60296 914 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 RDXP35241 583 aaKnown RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 NFKBIBQ15653 356 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 RAI14Q9P0K7 980 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 POLR3AO14802 1390 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 ANKRD18BA2A2Z9 1011 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 NASPP49321 788 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 FLIIQ13045 1269 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 PPP1R42Q7Z4L9 355 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 ANKRD24Q8TF21 1146 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 C19orf44Q9H6X5 657 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 CCDC173Q0VFZ6 552 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 CDC5LQ99459 802 aaKnown RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 LUC7LQ9NQ29 371 aaKnown RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 OFD1O75665 1012 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 LARP1BQ659C4 914 aaKnown RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 MPRIPQ6WCQ1 1025 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 PTCD1O75127 700 aaKnown RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 CCDC192P0DO97 292 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 CWC27Q6UX04 472 aaKnown RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 MYD88Q99836 296 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 CWC25Q9NXE8 425 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 ODF2Q5BJF6 829 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 TSPY26PQ9H489 355 aa5.74□□□□□ -1.49
SCN3A-202ENST00000360093 RNF41Q9H4P4 317 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-202ENST00000360093 MYO6Q9UM54 1294 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 NPATQ14207 1427 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 CDR1P51861 262 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 RBM5P52756 815 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 CT47A1Q5JQC4 288 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 EVI5LQ96CN4 794 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 ACBD3Q9H3P7 528 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 SH2B1Q9NRF2 756 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 TBX22Q9Y458 520 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 FLT4P35916 1363 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 BMP2KQ9NSY1 1161 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 ARGLU1Q9NWB6 273 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 PIK3C2GO75747 1445 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 PLXNC1O60486 1568 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 KIF1BO60333 1816 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 AKAP4Q5JQC9 854 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 CCAR2Q8N163 923 aaKnown RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 CCDC184Q52MB2 194 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 RPGRQ92834 1020 aaKnown RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 TRMT112Q9UI30 125 aaKnown RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 IDH1O75874 414 aaKnown RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 FOSBP53539 338 aa5.73□□□□□ -1.49
SCN3A-202ENST00000360093 JAKMIP1Q96N16 626 aaKnown RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.73□□□□□ -1.49
SCN3A-202ENST00000360093 PARD3Q8TEW0 1356 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 DCTN1Q14203 1278 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 MIS18AQ9NYP9 233 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 EXOC6BQ9Y2D4 811 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 YTHDC2Q9H6S0 1430 aaKnown RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 KRT18P05783 430 aaKnown RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 ZCRB1Q8TBF4 217 aaKnown RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 IL1RAPL2Q9NP60 686 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 SPTY2D1Q68D10 685 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 ZSCAN29Q8IWY8 852 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 ZNHIT6Q9NWK9 470 aaKnown RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 BABAM1Q9NWV8 329 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 ANKIB1Q9P2G1 1089 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 NPC1L1Q9UHC9 1359 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 PRPF40AO75400 957 aaKnown RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 ATP2B2Q01814 1243 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 SAMD1Q6SPF0 538 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 NAPBQ9H115 298 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 PRM3Q9NNZ6 103 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 CBFA2T2O43439 604 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 ADAMTS2O95450 1211 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 LDHCP07864 332 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 TRIM27P14373 513 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 ME1P48163 572 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 AMER1Q5JTC6 1135 aaPredicted RBP5.72□□□□□ -1.49
SCN3A-202ENST00000360093 IQCA1Q86XH1 822 aa5.72□□□□□ -1.49
SCN3A-202ENST00000360093 PHAXQ9H814 394 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms