RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
SSU72-202ENST00000359060 MED14O60244 1454 aa13.61□□□□□ -0.23
SSU72-202ENST00000359060 SIL1Q9H173 461 aa13.61□□□□□ -0.23
SSU72-202ENST00000359060 USP6P35125 1406 aa13.6□□□□□ -0.23
SSU72-202ENST00000359060 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
SSU72-202ENST00000359060 BRPF1P55201 1214 aaPredicted RBP13.6□□□□□ -0.23
SSU72-202ENST00000359060 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
SSU72-202ENST00000359060 RBM25P49756 843 aaKnown RBP13.6□□□□□ -0.23
SSU72-202ENST00000359060 PPP1R42Q7Z4L9 355 aa13.6□□□□□ -0.23
SSU72-202ENST00000359060 DNAAF4Q8WXU2 420 aa13.6□□□□□ -0.23
SSU72-202ENST00000359060 PLEKHG1Q9ULL1 1385 aa13.6□□□□□ -0.23
SSU72-202ENST00000359060 CD163L1Q9NR16 1453 aa13.6□□□□□ -0.23
SSU72-202ENST00000359060 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
SSU72-202ENST00000359060 PRPF40AO75400 957 aaKnown RBP13.59□□□□□ -0.23
SSU72-202ENST00000359060 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
SSU72-202ENST00000359060 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
SSU72-202ENST00000359060 CPSF1Q10570 1443 aaKnown RBP13.59□□□□□ -0.23
SSU72-202ENST00000359060 GSPT1P15170 499 aaKnown RBP13.59□□□□□ -0.23
SSU72-202ENST00000359060 MRE11P49959 708 aa13.59□□□□□ -0.23
SSU72-202ENST00000359060 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
SSU72-202ENST00000359060 SNX21Q969T3 373 aa13.58□□□□□ -0.24
SSU72-202ENST00000359060 LGR6Q9HBX8 967 aa13.58□□□□□ -0.24
SSU72-202ENST00000359060 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
SSU72-202ENST00000359060 CWC27Q6UX04 472 aaKnown RBP13.58□□□□□ -0.24
SSU72-202ENST00000359060 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
SSU72-202ENST00000359060 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
SSU72-202ENST00000359060 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
SSU72-202ENST00000359060 IFT172Q9UG01 1749 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 ANKRD24Q8TF21 1146 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 HTATSF1O43719 755 aaKnown RBP13.57□□□□□ -0.24
SSU72-202ENST00000359060 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 CPS1P31327 1500 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 ATP8B2P98198 1209 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
SSU72-202ENST00000359060 KIF1BPQ96EK5 621 aa13.56□□□□□ -0.24
SSU72-202ENST00000359060 RTL1A6NKG5 1358 aa13.56□□□□□ -0.24
SSU72-202ENST00000359060 KIAA0232Q92628 1395 aa13.56□□□□□ -0.24
SSU72-202ENST00000359060 GCP02774 474 aa13.56□□□□□ -0.24
SSU72-202ENST00000359060 DBF4Q9UBU7 674 aaPredicted RBP13.56□□□□□ -0.24
SSU72-202ENST00000359060 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
SSU72-202ENST00000359060 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
SSU72-202ENST00000359060 IP6K1Q92551 441 aa13.56□□□□□ -0.24
SSU72-202ENST00000359060 NLRP1Q9C000 1473 aa13.56□□□□□ -0.24
SSU72-202ENST00000359060 ZKSCAN1P17029 563 aaPredicted RBP13.55□□□□□ -0.24
SSU72-202ENST00000359060 MSNP26038 577 aaKnown RBP13.55□□□□□ -0.24
SSU72-202ENST00000359060 ARHGEF10O15013 1369 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 RIMBP3CA6NJZ7 1639 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 RIMBP3BA6NNM3 1639 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 RICTORQ6R327 1708 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 AACSQ86V21 672 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 GRPEL1Q9HAV7 217 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 RIMBP3Q9UFD9 1639 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 USP26Q9BXU7 913 aa13.55□□□□□ -0.24
SSU72-202ENST00000359060 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
SSU72-202ENST00000359060 SLC39A6Q13433 755 aa13.54□□□□□ -0.24
SSU72-202ENST00000359060 GORABQ5T7V8 394 aa13.54□□□□□ -0.24
SSU72-202ENST00000359060 LARP6Q9BRS8 491 aaKnown RBP13.54□□□□□ -0.24
SSU72-202ENST00000359060 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
SSU72-202ENST00000359060 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
SSU72-202ENST00000359060 DDX54Q8TDD1 881 aaKnown RBP13.54□□□□□ -0.24
SSU72-202ENST00000359060 FSD1Q9BTV5 496 aa13.54□□□□□ -0.24
SSU72-202ENST00000359060 ANTXR1Q9H6X2 564 aa13.54□□□□□ -0.24
SSU72-202ENST00000359060 PTCH1Q13635 1447 aa13.54□□□□□ -0.24
SSU72-202ENST00000359060 RHPN1Q8TCX5 695 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 SYAP1Q96A49 352 aaPredicted RBP13.53□□□□□ -0.24
SSU72-202ENST00000359060 EVA1CP58658 441 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 KCNQ3O43525 872 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 CD2BP2O95400 341 aaKnown RBP13.53□□□□□ -0.24
SSU72-202ENST00000359060 PRKCSHP14314 528 aaPredicted RBP13.53□□□□□ -0.24
SSU72-202ENST00000359060 MCM2P49736 904 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 HSP90B1P14625 803 aaKnown RBP13.53□□□□□ -0.24
SSU72-202ENST00000359060 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 PANK2Q9BZ23 570 aa13.53□□□□□ -0.24
SSU72-202ENST00000359060 VPS37CA5D8V6 355 aaPredicted RBP13.52□□□□□ -0.24
SSU72-202ENST00000359060 RAB11FIP3O75154 756 aa13.52□□□□□ -0.24
SSU72-202ENST00000359060 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.24
SSU72-202ENST00000359060 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.24
SSU72-202ENST00000359060 AGLP35573 1532 aa13.52□□□□□ -0.24
SSU72-202ENST00000359060 DIP2BQ9P265 1576 aa13.52□□□□□ -0.25
SSU72-202ENST00000359060 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.25
SSU72-202ENST00000359060 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
SSU72-202ENST00000359060 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
SSU72-202ENST00000359060 DLC1Q96QB1 1528 aa13.52□□□□□ -0.25
SSU72-202ENST00000359060 BAG4O95429 457 aaKnown RBP13.52□□□□□ -0.25
SSU72-202ENST00000359060 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.25
SSU72-202ENST00000359060 RNF214Q8ND24 703 aa13.52□□□□□ -0.25
SSU72-202ENST00000359060 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
SSU72-202ENST00000359060 ESYT1Q9BSJ8 1104 aa13.52□□□□□ -0.25
SSU72-202ENST00000359060 MAP2P11137 1827 aaKnown RBP13.52□□□□□ -0.25
SSU72-202ENST00000359060 PIP4K2AP48426 406 aaPredicted RBP13.51□□□□□ -0.25
SSU72-202ENST00000359060 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
SSU72-202ENST00000359060 CCDC8Q9H0W5 538 aaPredicted RBP13.51□□□□□ -0.25
SSU72-202ENST00000359060 CABP4P57796 275 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms