RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 CABP4P57796 275 aa17.27■□□□□ 0.36
SIRPA-202ENST00000358771 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
SIRPA-202ENST00000358771 PDE1AP54750 535 aa17.27■□□□□ 0.36
SIRPA-202ENST00000358771 MSNP26038 577 aaKnown RBP17.26■□□□□ 0.35
SIRPA-202ENST00000358771 DDX17Q92841 729 aaKnown RBP17.26■□□□□ 0.35
SIRPA-202ENST00000358771 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
SIRPA-202ENST00000358771 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
SIRPA-202ENST00000358771 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
SIRPA-202ENST00000358771 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
SIRPA-202ENST00000358771 DNAJC2Q99543 621 aaKnown RBP17.26■□□□□ 0.35
SIRPA-202ENST00000358771 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
SIRPA-202ENST00000358771 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
SIRPA-202ENST00000358771 CAMSAP1Q5T5Y3 1602 aa17.26■□□□□ 0.35
SIRPA-202ENST00000358771 SETBP1Q9Y6X0 1596 aa17.26■□□□□ 0.35
SIRPA-202ENST00000358771 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
SIRPA-202ENST00000358771 NPHP1O15259 732 aa17.25■□□□□ 0.35
SIRPA-202ENST00000358771 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
SIRPA-202ENST00000358771 RNF214Q8ND24 703 aa17.25■□□□□ 0.35
SIRPA-202ENST00000358771 VWDEQ8N2E2 1590 aa17.25■□□□□ 0.35
SIRPA-202ENST00000358771 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
SIRPA-202ENST00000358771 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
SIRPA-202ENST00000358771 SBNO1A3KN83 1393 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 FRMPD1Q5SYB0 1578 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 SIRT2Q8IXJ6 389 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 SIRT1Q96EB6 747 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 KIF1BPQ96EK5 621 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 PTPRMP28827 1452 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 NRXN1Q9ULB1 1477 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 SPG7Q9UQ90 795 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 ABCC4O15439 1325 aa17.24■□□□□ 0.35
SIRPA-202ENST00000358771 ATP7BP35670 1465 aa17.23■□□□□ 0.35
SIRPA-202ENST00000358771 MROH1Q8NDA8 1641 aa17.23■□□□□ 0.35
SIRPA-202ENST00000358771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.23■□□□□ 0.35
SIRPA-202ENST00000358771 PNMA6EA0A0J9YXQ4 647 aa17.23■□□□□ 0.35
SIRPA-202ENST00000358771 FOSBP53539 338 aa17.23■□□□□ 0.35
SIRPA-202ENST00000358771 FAM135BQ49AJ0 1406 aa17.23■□□□□ 0.35
SIRPA-202ENST00000358771 KCNQ3O43525 872 aa17.23■□□□□ 0.35
SIRPA-202ENST00000358771 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
SIRPA-202ENST00000358771 HSPA2P54652 639 aa17.22■□□□□ 0.35
SIRPA-202ENST00000358771 MYD88Q99836 296 aa17.22■□□□□ 0.35
SIRPA-202ENST00000358771 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
SIRPA-202ENST00000358771 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
SIRPA-202ENST00000358771 FAM177BA6PVY3 158 aa17.22■□□□□ 0.35
SIRPA-202ENST00000358771 ATP5J2-PTCD1G3V325 749 aa17.22■□□□□ 0.35
SIRPA-202ENST00000358771 PA2G4Q9UQ80 394 aaKnown RBP17.22■□□□□ 0.35
SIRPA-202ENST00000358771 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
SIRPA-202ENST00000358771 IP6K1Q92551 441 aa17.21■□□□□ 0.35
SIRPA-202ENST00000358771 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
SIRPA-202ENST00000358771 USP19O94966 1318 aa17.21■□□□□ 0.35
SIRPA-202ENST00000358771 PIK3R4Q99570 1358 aa17.21■□□□□ 0.35
SIRPA-202ENST00000358771 MAP3K5Q99683 1374 aa17.21■□□□□ 0.35
SIRPA-202ENST00000358771 SYAP1Q96A49 352 aaPredicted RBP17.21■□□□□ 0.35
SIRPA-202ENST00000358771 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
SIRPA-202ENST00000358771 MRE11P49959 708 aa17.2■□□□□ 0.34
SIRPA-202ENST00000358771 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
SIRPA-202ENST00000358771 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
SIRPA-202ENST00000358771 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
SIRPA-202ENST00000358771 USP6P35125 1406 aa17.19■□□□□ 0.34
SIRPA-202ENST00000358771 ZRSR1Q15695 479 aaKnown RBP17.19■□□□□ 0.34
SIRPA-202ENST00000358771 PIK3C2BO00750 1634 aa17.19■□□□□ 0.34
SIRPA-202ENST00000358771 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
SIRPA-202ENST00000358771 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
SIRPA-202ENST00000358771 NFATC2IPQ8NCF5 419 aa17.19■□□□□ 0.34
SIRPA-202ENST00000358771 NBPF7P0C2Y1 421 aaPredicted RBP17.18■□□□□ 0.34
SIRPA-202ENST00000358771 FIBPO43427 364 aa17.18■□□□□ 0.34
SIRPA-202ENST00000358771 STK3Q13188 491 aa17.18■□□□□ 0.34
SIRPA-202ENST00000358771 AKAP4Q5JQC9 854 aa17.18■□□□□ 0.34
SIRPA-202ENST00000358771 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
SIRPA-202ENST00000358771 DTNBO60941 627 aa17.17■□□□□ 0.34
SIRPA-202ENST00000358771 JAKMIP1Q96N16 626 aaKnown RBP17.17■□□□□ 0.34
SIRPA-202ENST00000358771 HTATSF1O43719 755 aaKnown RBP17.17■□□□□ 0.34
SIRPA-202ENST00000358771 NASPP49321 788 aaPredicted RBP17.17■□□□□ 0.34
SIRPA-202ENST00000358771 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
SIRPA-202ENST00000358771 GRPEL1Q9HAV7 217 aa17.17■□□□□ 0.34
SIRPA-202ENST00000358771 SETD1BQ9UPS6 1966 aaKnown RBP17.17■□□□□ 0.34
SIRPA-202ENST00000358771 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
SIRPA-202ENST00000358771 ZGPATQ8N5A5 531 aaKnown RBP17.16■□□□□ 0.34
SIRPA-202ENST00000358771 GDPD2Q9HCC8 539 aa17.16■□□□□ 0.34
SIRPA-202ENST00000358771 PRPF40BQ6NWY9 871 aaKnown RBP17.16■□□□□ 0.34
SIRPA-202ENST00000358771 KIAA1210Q9ULL0 1709 aa17.16■□□□□ 0.34
SIRPA-202ENST00000358771 GLRX3O76003 335 aaKnown RBP17.16■□□□□ 0.34
SIRPA-202ENST00000358771 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
SIRPA-202ENST00000358771 MPNDQ8N594 471 aa17.16■□□□□ 0.34
SIRPA-202ENST00000358771 H3BQV1 296 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 CASTP20810 708 aaKnown RBP17.15■□□□□ 0.34
SIRPA-202ENST00000358771 RBM25P49756 843 aaKnown RBP17.15■□□□□ 0.34
SIRPA-202ENST00000358771 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 FAM184AQ8NB25 1140 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 TOMM22Q9NS69 142 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 RAB11FIP3O75154 756 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 MCM2P49736 904 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
SIRPA-202ENST00000358771 USP26Q9BXU7 913 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 PANK2Q9BZ23 570 aa17.15■□□□□ 0.34
SIRPA-202ENST00000358771 XAGE3Q8WTP9 111 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms