RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 HSPA4P34932 840 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 CWC27Q6UX04 472 aaKnown RBP10.2□□□□□ -0.78
COL6A6-201ENST00000358511 TMEM57Q8N5G2 664 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 RAI14Q9P0K7 980 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 SPECC1LQ69YQ0 1117 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 TBC1D2BQ9UPU7 963 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 ATP2B1P20020 1258 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 ITSN2Q9NZM3 1697 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 EIF5P55010 431 aaKnown RBP10.2□□□□□ -0.78
COL6A6-201ENST00000358511 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
COL6A6-201ENST00000358511 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
COL6A6-201ENST00000358511 PRKAR2BP31323 418 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 ZNF165P49910 485 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 CKAP2LQ8IYA6 745 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 CUL7Q14999 1698 aa10.2□□□□□ -0.78
COL6A6-201ENST00000358511 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 HCLS1P14317 486 aaPredicted RBP10.19□□□□□ -0.78
COL6A6-201ENST00000358511 IFFO1Q0D2I5 559 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 EHBP1Q8NDI1 1231 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 SMC1AQ14683 1233 aaKnown RBP10.19□□□□□ -0.78
COL6A6-201ENST00000358511 C9orf84Q5VXU9 1444 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 GCOM1H8Y6P7 765 aaPredicted RBP10.19□□□□□ -0.78
COL6A6-201ENST00000358511 MYZAPP0CAP1 466 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 BCCIPQ9P287 314 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL6A6-201ENST00000358511 NCAPD3P42695 1498 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
COL6A6-201ENST00000358511 CEP131Q9UPN4 1083 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 CAPN2P17655 700 aa10.19□□□□□ -0.78
COL6A6-201ENST00000358511 IBSPP21815 317 aaPredicted RBP10.19□□□□□ -0.78
COL6A6-201ENST00000358511 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL6A6-201ENST00000358511 ATAD2BQ9ULI0 1458 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 ANKRD62A6NC57 917 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 TMC6Q7Z403 805 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 RSPH14Q9UHP6 348 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 STX6O43752 255 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 TDO2P48775 406 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 NAA15Q9BXJ9 866 aaKnown RBP10.18□□□□□ -0.78
COL6A6-201ENST00000358511 NOL7Q9UMY1 257 aaKnown RBP10.18□□□□□ -0.78
COL6A6-201ENST00000358511 ANKS4BQ8N8V4 417 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 LIMCH1Q9UPQ0 1083 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 CCDC141Q6ZP82 1450 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 SLC3A2P08195 630 aaKnown RBP10.18□□□□□ -0.78
COL6A6-201ENST00000358511 GABPB1Q06547 395 aaPredicted RBP10.18□□□□□ -0.78
COL6A6-201ENST00000358511 WASF1Q92558 559 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 ALS2CR12Q96Q35 445 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 CTTNBP2Q8WZ74 1663 aa10.18□□□□□ -0.78
COL6A6-201ENST00000358511 RARSP54136 660 aaKnown RBP10.18□□□□□ -0.78
COL6A6-201ENST00000358511 MX1P20591 662 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 SPATA24Q86W54 205 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 TANGO6Q9C0B7 1094 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 NUP88Q99567 741 aaPredicted RBP10.17□□□□□ -0.78
COL6A6-201ENST00000358511 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 SLU7O95391 586 aaKnown RBP10.17□□□□□ -0.78
COL6A6-201ENST00000358511 ALDH1L2Q3SY69 923 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 SKAP1Q86WV1 359 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 RPAP2Q8IXW5 612 aaPredicted RBP10.17□□□□□ -0.78
COL6A6-201ENST00000358511 FAM200AQ8TCP9 573 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 CADPSQ9ULU8 1353 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 GAS2L2Q8NHY3 880 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 SNX21Q969T3 373 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 CFAP43Q8NDM7 1665 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 ABCC11Q96J66 1382 aa10.17□□□□□ -0.78
COL6A6-201ENST00000358511 PAFAH1B1P43034 410 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 A0A1B0GUL7 405 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 NBPF8Q3BBV2 869 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 MSL1Q68DK7 614 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 FERMT3Q86UX7 667 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 CEP112Q8N8E3 955 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 CCDC69A6NI79 296 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 MAP4K4O95819 1239 aaPredicted RBP10.16□□□□□ -0.78
COL6A6-201ENST00000358511 KRT18P05783 430 aaKnown RBP10.16□□□□□ -0.78
COL6A6-201ENST00000358511 SKILP12757 684 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 CPSF2Q9P2I0 782 aaKnown RBP10.16□□□□□ -0.78
COL6A6-201ENST00000358511 EIF2AK4Q9P2K8 1649 aaKnown RBP10.16□□□□□ -0.78
COL6A6-201ENST00000358511 NAIPQ13075 1403 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 EBAG9O00559 213 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 MCM6Q14566 821 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 GBP6Q6ZN66 633 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 GGNBP2Q9H3C7 697 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 CC2D2AQ9P2K1 1620 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 RAB3GAP1Q15042 981 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 CCDC12Q8WUD4 166 aaPredicted RBP10.16□□□□□ -0.78
COL6A6-201ENST00000358511 CCDC113Q9H0I3 377 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 DAPK1P53355 1430 aa10.16□□□□□ -0.78
COL6A6-201ENST00000358511 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
COL6A6-201ENST00000358511 GNG11P61952 73 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 CTNNA3Q9UI47 895 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 ANKRD30BQ9BXX2 1392 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 HSF2BPO75031 334 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 YEATS4O95619 227 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 C10orf67Q8IYJ2 551 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 AACSQ86V21 672 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 GOLGA1Q92805 767 aa10.15□□□□□ -0.78
COL6A6-201ENST00000358511 RRAGDQ9NQL2 400 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms