RNA–Protein interactions for RNA: ENST00000357428.5

USP33-201, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 5 BASIC

Gene USP33, Length 4,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-201ENST00000357428 NLRP1Q9C000 1473 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 TTC22Q5TAA0 569 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 ANKRD44Q8N8A2 993 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 CABLES1Q8TDN4 633 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 SIRT1Q96EB6 747 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 ORAI2Q96SN7 254 aa4.44□□□□□ -1.7
USP33-201ENST00000357428 VPS37CA5D8V6 355 aaPredicted RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 ZBTB7BO15156 539 aaPredicted RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 PTCD1O75127 700 aaKnown RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 MSNP26038 577 aaKnown RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 ERC1Q8IUD2 1116 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 DBF4Q9UBU7 674 aaPredicted RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 BRPF3Q9ULD4 1205 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 FAM177BA6PVY3 158 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 GTF2E1P29083 439 aaPredicted RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 HSPA2P54652 639 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 GNL2Q13823 731 aaKnown RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 CEP85Q6P2H3 762 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 CWC27Q6UX04 472 aaKnown RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 MYD88Q99836 296 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 TOMM22Q9NS69 142 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 SMC3Q9UQE7 1217 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 MAP3K2Q9Y2U5 619 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 PTPRMP28827 1452 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 NRXN1Q9ULB1 1477 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 PPLO60437 1756 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 CHL1O00533 1208 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 GCP02774 474 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 MCM4P33991 863 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 FOSBP53539 338 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 SLC39A6Q13433 755 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 RNF20Q5VTR2 975 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 PPP1R42Q7Z4L9 355 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 KIF1BPQ96EK5 621 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 ADGRB1O14514 1584 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 USP6P35125 1406 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 AATKQ6ZMQ8 1374 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 PREX1Q8TCU6 1659 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 NCBP3Q53F19 620 aaKnown RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 IP6K1Q92551 441 aa4.43□□□□□ -1.7
USP33-201ENST00000357428 UPF3BQ9BZI7 483 aaKnown RBP4.43□□□□□ -1.7
USP33-201ENST00000357428 CDK12Q9NYV4 1490 aaPredicted RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 ARHGEF10O15013 1369 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 H3BQV1 296 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 HTATSF1O43719 755 aaKnown RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 SDSP20132 328 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 IFFO2Q5TF58 517 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 FAM184AQ8NB25 1140 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 CCDC85AQ96PX6 553 aaPredicted RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 PHAXQ9H814 394 aaKnown RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 PIP4K2AP48426 406 aaPredicted RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 AKAP4Q5JQC9 854 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 CADPS2Q86UW7 1296 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 OTUD7AQ8TE49 926 aaPredicted RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 JARID2Q92833 1246 aaPredicted RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 DCTPP1Q9H773 170 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 CSPP1Q1MSJ5 1256 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 WASHC4Q2M389 1173 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 CAVIN1Q6NZI2 390 aaKnown RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 LARP1Q6PKG0 1096 aaKnown RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 KIF6Q6ZMV9 814 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 IL27Q8NEV9 243 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.42□□□□□ -1.7
USP33-201ENST00000357428 ATP6V1DQ9Y5K8 247 aa4.42□□□□□ -1.7
USP33-201ENST00000357428 LRRC7Q96NW7 1537 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 RAB11FIP3O75154 756 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 PRPF40AO75400 957 aaKnown RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 PDE1AP54750 535 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 NBPF6Q5VWK0 638 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 PLEKHM2Q8IWE5 1019 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 DRC7Q8IY82 874 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 IFNL2Q8IZJ0 200 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 DDX17Q92841 729 aaKnown RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 NBPF4Q96M43 638 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 CCDC8Q9H0W5 538 aaPredicted RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 LGR6Q9HBX8 967 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 HYPKQ9NX55 129 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 DIP2BQ9P265 1576 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 KAT6BQ8WYB5 2073 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 ABCC4O15439 1325 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 NPHP3Q7Z494 1330 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 NUTM2BA6NNL0 878 aaPredicted RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 NUTM2EB1AL46 878 aaPredicted RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 ATP5J2-PTCD1G3V325 749 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 PHF14O94880 888 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 APPP05067 770 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 MCM2P49736 904 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 NUTM2AQ8IVF1 878 aaPredicted RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 C19orf44Q9H6X5 657 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 CIZ1Q9ULV3 898 aaPredicted RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 ARHGEF40Q8TER5 1519 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 GLRX3O76003 335 aaKnown RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 SSFA2P28290 1259 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 JAKMIP1Q96N16 626 aaKnown RBP4.41□□□□□ -1.7
USP33-201ENST00000357428 FMNL2Q96PY5 1086 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 BOLA2Q9H3K6 86 aa4.41□□□□□ -1.7
USP33-201ENST00000357428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.4□□□□□ -1.7
USP33-201ENST00000357428 HIP1O00291 1037 aa4.4□□□□□ -1.7
USP33-201ENST00000357428 CWF19L2Q2TBE0 894 aaKnown RBP4.4□□□□□ -1.7
USP33-201ENST00000357428 LRRFIP1Q32MZ4 808 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms