RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ATP6V1DQ9Y5K8 247 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 AATKQ6ZMQ8 1374 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 ABCC4O15439 1325 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 FAM135BQ49AJ0 1406 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 ASXL2Q76L83 1435 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 MORC1Q86VD1 984 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 CEP120Q8N960 986 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 ZNF777Q9ULD5 760 aaPredicted RBP9.18□□□□□ -0.94
CCR9-201ENST00000355983 FHOD1Q9Y613 1164 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 ABCA9Q8IUA7 1624 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 CD109Q6YHK3 1445 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 SETBP1Q9Y6X0 1596 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 SLU7O95391 586 aaKnown RBP9.17□□□□□ -0.94
CCR9-201ENST00000355983 CAVIN2O95810 425 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 NEUROD2Q15784 382 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 ZSCAN25Q6NSZ9 544 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 PLA2G4DQ86XP0 818 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 PUS7Q96PZ0 661 aaKnown RBP9.17□□□□□ -0.94
CCR9-201ENST00000355983 MAP3K4Q9Y6R4 1608 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 PTGS1P23219 599 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 SIRT2Q8IXJ6 389 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 L2HGDHQ9H9P8 463 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 ZNF446Q9NWS9 450 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 POLKQ9UBT6 870 aa9.17□□□□□ -0.94
CCR9-201ENST00000355983 KNDC1Q76NI1 1749 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 MYO1CO00159 1063 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 C16orf45Q96MC5 204 aaPredicted RBP9.16□□□□□ -0.94
CCR9-201ENST00000355983 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 NSD3Q9BZ95 1437 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 ZRANB2O95218 330 aaKnown RBP eCLIP9.16□□□□□ -0.94
CCR9-201ENST00000355983 NOM1Q5C9Z4 860 aaKnown RBP9.16□□□□□ -0.94
CCR9-201ENST00000355983 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 GOLGA5Q8TBA6 731 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 PLEKHF1Q96S99 279 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 OSBPL3Q9H4L5 887 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 ZNF215Q9UL58 517 aaPredicted RBP9.16□□□□□ -0.94
CCR9-201ENST00000355983 TRIM35Q9UPQ4 493 aa9.16□□□□□ -0.94
CCR9-201ENST00000355983 ERBB3P21860 1342 aa9.15□□□□□ -0.94
CCR9-201ENST00000355983 IFT172Q9UG01 1749 aa9.15□□□□□ -0.94
CCR9-201ENST00000355983 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.94
CCR9-201ENST00000355983 MCCP23508 829 aa9.15□□□□□ -0.94
CCR9-201ENST00000355983 TPD52L1Q16890 204 aaPredicted RBP9.15□□□□□ -0.94
CCR9-201ENST00000355983 TDRD7Q8NHU6 1098 aaKnown RBP9.15□□□□□ -0.94
CCR9-201ENST00000355983 SIRT1Q96EB6 747 aa9.15□□□□□ -0.94
CCR9-201ENST00000355983 FANCAO15360 1455 aa9.15□□□□□ -0.94
CCR9-201ENST00000355983 COL3A1P02461 1466 aaPredicted RBP9.15□□□□□ -0.94
CCR9-201ENST00000355983 A0A1B0GUL7 405 aa9.15□□□□□ -0.95
CCR9-201ENST00000355983 PNMA6AP0CW24 399 aaPredicted RBP9.15□□□□□ -0.95
CCR9-201ENST00000355983 ZNF75DP51815 510 aa9.15□□□□□ -0.95
CCR9-201ENST00000355983 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.95
CCR9-201ENST00000355983 CCDC186Q7Z3E2 898 aa9.15□□□□□ -0.95
CCR9-201ENST00000355983 RPAINQ86UA6 219 aa9.15□□□□□ -0.95
CCR9-201ENST00000355983 AEBP1Q8IUX7 1158 aa9.15□□□□□ -0.95
CCR9-201ENST00000355983 NFATC2IPQ8NCF5 419 aa9.15□□□□□ -0.95
CCR9-201ENST00000355983 FBXO18Q8NFZ0 1043 aa9.15□□□□□ -0.95
CCR9-201ENST00000355983 TPM1P09493 284 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 TMPOP42166 694 aaKnown RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 PLA2G4AP47712 749 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 DHX8Q14562 1220 aaKnown RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 SRLQ86TD4 932 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 SUGP1Q8IWZ8 645 aaKnown RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 MPNDQ8N594 471 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 TSR2Q969E8 191 aaKnown RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 PLEKHG2Q9H7P9 1386 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 ANKRD26Q9UPS8 1709 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 KIF1CO43896 1103 aaKnown RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 RPS6KA5O75582 802 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 ZSCAN22P10073 491 aaPredicted RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 SDSP20132 328 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 KCNJ6P48051 423 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 NEK4P51957 841 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 NAA30Q147X3 362 aaPredicted RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 PTPN14Q15678 1187 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 SARM1Q6SZW1 724 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 SYT10Q6XYQ8 523 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 CHAMP1Q96JM3 812 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 SRCIN1Q9C0H9 1055 aa9.14□□□□□ -0.95
CCR9-201ENST00000355983 ARGLU1Q9NWB6 273 aaPredicted RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 SPAG9O60271 1321 aaKnown RBP9.14□□□□□ -0.95
CCR9-201ENST00000355983 NRXN1Q9ULB1 1477 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 SMARCA5O60264 1052 aaPredicted RBP9.13□□□□□ -0.95
CCR9-201ENST00000355983 LMOD3Q0VAK6 560 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 ELF2Q15723 593 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 RBM43Q6ZSC3 357 aaKnown RBP9.13□□□□□ -0.95
CCR9-201ENST00000355983 FILIP1Q7Z7B0 1213 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 EXOC4Q96A65 974 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 ZSCAN26Q16670 478 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 CCDC93Q567U6 631 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 MRPL50Q8N5N7 158 aaKnown RBP9.13□□□□□ -0.95
CCR9-201ENST00000355983 SPC24Q8NBT2 197 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 CNKSR2Q8WXI2 1034 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 SLC52A1Q9NWF4 448 aa9.13□□□□□ -0.95
CCR9-201ENST00000355983 APPP05067 770 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 IVLP07476 585 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 MAGEA9P43362 315 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 MTHFSP49914 203 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 KRBA2Q6ZNG9 492 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 AK7Q96M32 723 aa9.12□□□□□ -0.95
CCR9-201ENST00000355983 CEP83Q9Y592 693 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 684 ms