RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TRPM1Q7Z4N2 1603 aa16.83■□□□□ 0.28
SREBF1-202ENST00000355815 MNS1Q8NEH6 495 aa16.83■□□□□ 0.28
SREBF1-202ENST00000355815 KIF3AQ9Y496 699 aa16.83■□□□□ 0.28
SREBF1-202ENST00000355815 PHF8Q9UPP1 1060 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
SREBF1-202ENST00000355815 PHAXQ9H814 394 aaKnown RBP16.82■□□□□ 0.28
SREBF1-202ENST00000355815 RBM27Q9P2N5 1060 aaKnown RBP16.82■□□□□ 0.28
SREBF1-202ENST00000355815 CCDC66A2RUB6 948 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 PPFIA3O75145 1194 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 DDX58O95786 925 aaKnown RBP16.82■□□□□ 0.28
SREBF1-202ENST00000355815 ANKRD44Q8N8A2 993 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 CEP85Q6P2H3 762 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 SASS6Q6UVJ0 657 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 CHAMP1Q96JM3 812 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
SREBF1-202ENST00000355815 CCDC8Q9H0W5 538 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-202ENST00000355815 PPP1R42Q7Z4L9 355 aa16.81■□□□□ 0.28
SREBF1-202ENST00000355815 AACSQ86V21 672 aa16.81■□□□□ 0.28
SREBF1-202ENST00000355815 RUFY2Q8WXA3 655 aa16.81■□□□□ 0.28
SREBF1-202ENST00000355815 MBD3O95983 291 aa16.81■□□□□ 0.28
SREBF1-202ENST00000355815 ARHGAP45Q92619 1136 aa16.81■□□□□ 0.28
SREBF1-202ENST00000355815 PUS7Q96PZ0 661 aaKnown RBP16.81■□□□□ 0.28
SREBF1-202ENST00000355815 LTKP29376 864 aa16.81■□□□□ 0.28
SREBF1-202ENST00000355815 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
SREBF1-202ENST00000355815 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
SREBF1-202ENST00000355815 ZCCHC11Q5TAX3 1644 aaKnown RBP16.8■□□□□ 0.28
SREBF1-202ENST00000355815 POGZQ7Z3K3 1410 aa16.8■□□□□ 0.28
SREBF1-202ENST00000355815 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
SREBF1-202ENST00000355815 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
SREBF1-202ENST00000355815 KCNA6P17658 529 aa16.8■□□□□ 0.28
SREBF1-202ENST00000355815 TRPM2O94759 1503 aa16.8■□□□□ 0.28
SREBF1-202ENST00000355815 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
SREBF1-202ENST00000355815 ADCY10Q96PN6 1610 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 GPS2Q13227 327 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 DCTPP1Q9H773 170 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 PDE1AP54750 535 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 EVA1CP58658 441 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 HDAC5Q9UQL6 1122 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 ATF3P18847 181 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 SLC39A6Q13433 755 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 BOLA2Q9H3K6 86 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
SREBF1-202ENST00000355815 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
SREBF1-202ENST00000355815 TCEANC2Q96MN5 208 aa16.78■□□□□ 0.28
SREBF1-202ENST00000355815 CHPF2Q9P2E5 772 aa16.78■□□□□ 0.28
SREBF1-202ENST00000355815 TNRQ92752 1358 aa16.78■□□□□ 0.28
SREBF1-202ENST00000355815 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
SREBF1-202ENST00000355815 ZNF830Q96NB3 372 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-202ENST00000355815 USP19O94966 1318 aa16.78■□□□□ 0.28
SREBF1-202ENST00000355815 BAG4O95429 457 aaKnown RBP16.78■□□□□ 0.28
SREBF1-202ENST00000355815 APPP05067 770 aa16.78■□□□□ 0.28
SREBF1-202ENST00000355815 TPM3P06753 285 aa16.78■□□□□ 0.28
SREBF1-202ENST00000355815 METP08581 1390 aa16.78■□□□□ 0.28
SREBF1-202ENST00000355815 CCDC112Q8NEF3 446 aa16.77■□□□□ 0.28
SREBF1-202ENST00000355815 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.27
SREBF1-202ENST00000355815 CD2BP2O95400 341 aaKnown RBP16.77■□□□□ 0.27
SREBF1-202ENST00000355815 CHRNA2Q15822 529 aa16.77■□□□□ 0.27
SREBF1-202ENST00000355815 FAM177A1Q8N128 213 aaPredicted RBP16.77■□□□□ 0.27
SREBF1-202ENST00000355815 JAKMIP1Q96N16 626 aaKnown RBP16.77■□□□□ 0.27
SREBF1-202ENST00000355815 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
SREBF1-202ENST00000355815 PAXIP1Q6ZW49 1069 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-202ENST00000355815 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
SREBF1-202ENST00000355815 ZFYVE16Q7Z3T8 1539 aa16.76■□□□□ 0.27
SREBF1-202ENST00000355815 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
SREBF1-202ENST00000355815 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
SREBF1-202ENST00000355815 USP25Q9UHP3 1055 aa16.76■□□□□ 0.27
SREBF1-202ENST00000355815 CIZ1Q9ULV3 898 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-202ENST00000355815 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
SREBF1-202ENST00000355815 FILIP1Q7Z7B0 1213 aa16.75■□□□□ 0.27
SREBF1-202ENST00000355815 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
SREBF1-202ENST00000355815 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
SREBF1-202ENST00000355815 CASTP20810 708 aaKnown RBP16.75■□□□□ 0.27
SREBF1-202ENST00000355815 CROCC2H7BZ55 1655 aa16.75■□□□□ 0.27
SREBF1-202ENST00000355815 SIRT2Q8IXJ6 389 aa16.75■□□□□ 0.27
SREBF1-202ENST00000355815 DHX37Q8IY37 1157 aaKnown RBP16.75■□□□□ 0.27
SREBF1-202ENST00000355815 PNMA6EA0A0J9YXQ4 647 aa16.74■□□□□ 0.27
SREBF1-202ENST00000355815 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
SREBF1-202ENST00000355815 ATP5J2-PTCD1G3V325 749 aa16.74■□□□□ 0.27
SREBF1-202ENST00000355815 CPA1P15085 419 aa16.74■□□□□ 0.27
SREBF1-202ENST00000355815 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
SREBF1-202ENST00000355815 CABLES1Q8TDN4 633 aa16.74■□□□□ 0.27
SREBF1-202ENST00000355815 PTPRCP08575 1304 aa16.74■□□□□ 0.27
SREBF1-202ENST00000355815 MSH6P52701 1360 aa16.74■□□□□ 0.27
SREBF1-202ENST00000355815 CHL1O00533 1208 aa16.73■□□□□ 0.27
SREBF1-202ENST00000355815 GSPT1P15170 499 aaKnown RBP16.73■□□□□ 0.27
SREBF1-202ENST00000355815 PLCD3Q8N3E9 789 aa16.73■□□□□ 0.27
SREBF1-202ENST00000355815 MAP3K2Q9Y2U5 619 aa16.73■□□□□ 0.27
SREBF1-202ENST00000355815 IQGAP3Q86VI3 1631 aa16.73■□□□□ 0.27
SREBF1-202ENST00000355815 CWF19L2Q2TBE0 894 aaKnown RBP16.73■□□□□ 0.27
SREBF1-202ENST00000355815 ARGLU1Q9NWB6 273 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-202ENST00000355815 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-202ENST00000355815 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
SREBF1-202ENST00000355815 KIF1BPQ96EK5 621 aa16.72■□□□□ 0.27
SREBF1-202ENST00000355815 TMX3Q96JJ7 454 aa16.72■□□□□ 0.27
SREBF1-202ENST00000355815 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
SREBF1-202ENST00000355815 SYNMO15061 1565 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms