RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 FOXO3O43524 673 aa15.49■□□□□ 0.07
SCN8A-202ENST00000355133 RAB11FIP3O75154 756 aa15.49■□□□□ 0.07
SCN8A-202ENST00000355133 GLRX3O76003 335 aaKnown RBP15.49■□□□□ 0.07
SCN8A-202ENST00000355133 POLA1P09884 1462 aaPredicted RBP15.49■□□□□ 0.07
SCN8A-202ENST00000355133 GOLGA6L10A6NI86 522 aa15.49■□□□□ 0.07
SCN8A-202ENST00000355133 SEC63Q9UGP8 760 aaKnown RBP15.49■□□□□ 0.07
SCN8A-202ENST00000355133 EIF5P55010 431 aaKnown RBP15.49■□□□□ 0.07
SCN8A-202ENST00000355133 TXLNBQ8N3L3 684 aa15.49■□□□□ 0.07
SCN8A-202ENST00000355133 SSH1Q8WYL5 1049 aa15.49■□□□□ 0.07
SCN8A-202ENST00000355133 CWC15Q9P013 229 aaKnown RBP15.49■□□□□ 0.07
SCN8A-202ENST00000355133 TRMT112Q9UI30 125 aaKnown RBP15.49■□□□□ 0.07
SCN8A-202ENST00000355133 SEPT7Q16181 437 aaKnown RBP15.48■□□□□ 0.07
SCN8A-202ENST00000355133 DZIP1Q86YF9 867 aaKnown RBP15.48■□□□□ 0.07
SCN8A-202ENST00000355133 CENPHQ9H3R5 247 aa15.48■□□□□ 0.07
SCN8A-202ENST00000355133 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
SCN8A-202ENST00000355133 CHMP4BP1P59074 171 aa15.48■□□□□ 0.07
SCN8A-202ENST00000355133 DHX8Q14562 1220 aaKnown RBP15.48■□□□□ 0.07
SCN8A-202ENST00000355133 CCDC112Q8NEF3 446 aa15.48■□□□□ 0.07
SCN8A-202ENST00000355133 NAPBQ9H115 298 aa15.48■□□□□ 0.07
SCN8A-202ENST00000355133 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
SCN8A-202ENST00000355133 HMGN5P82970 282 aaKnown RBP15.48■□□□□ 0.07
SCN8A-202ENST00000355133 IFIT5Q13325 482 aaKnown RBP15.48■□□□□ 0.07
SCN8A-202ENST00000355133 SUPT6HQ7KZ85 1726 aaKnown RBP15.48■□□□□ 0.07
SCN8A-202ENST00000355133 CEP131Q9UPN4 1083 aa15.48■□□□□ 0.07
SCN8A-202ENST00000355133 AMOTQ4VCS5 1084 aa15.47■□□□□ 0.07
SCN8A-202ENST00000355133 PHF8Q9UPP1 1060 aa15.47■□□□□ 0.07
SCN8A-202ENST00000355133 TIAM1Q13009 1591 aa15.47■□□□□ 0.07
SCN8A-202ENST00000355133 CCDC82Q8N4S0 544 aa15.47■□□□□ 0.07
SCN8A-202ENST00000355133 ZNF287Q9HBT7 754 aa15.47■□□□□ 0.07
SCN8A-202ENST00000355133 SSR1P43307 286 aaKnown RBP15.46■□□□□ 0.07
SCN8A-202ENST00000355133 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
SCN8A-202ENST00000355133 SMTNL1A8MU46 457 aa15.46■□□□□ 0.07
SCN8A-202ENST00000355133 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
SCN8A-202ENST00000355133 FAM193AP78312 1265 aa15.46■□□□□ 0.07
SCN8A-202ENST00000355133 MTERF4Q7Z6M4 381 aaKnown RBP15.46■□□□□ 0.07
SCN8A-202ENST00000355133 LRRFIP2Q9Y608 721 aaKnown RBP15.46■□□□□ 0.07
SCN8A-202ENST00000355133 FBXO31Q5XUX0 539 aaPredicted RBP15.46■□□□□ 0.07
SCN8A-202ENST00000355133 GPTP24298 496 aa15.46■□□□□ 0.06
SCN8A-202ENST00000355133 GUCY1B3Q02153 619 aa15.46■□□□□ 0.06
SCN8A-202ENST00000355133 LEKR1Q6ZMV7 388 aa15.46■□□□□ 0.06
SCN8A-202ENST00000355133 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
SCN8A-202ENST00000355133 RARSP54136 660 aaKnown RBP15.45■□□□□ 0.06
SCN8A-202ENST00000355133 ENOX2Q16206 610 aaKnown RBP15.45■□□□□ 0.06
SCN8A-202ENST00000355133 TAX1BP1Q86VP1 789 aa15.45■□□□□ 0.06
SCN8A-202ENST00000355133 EPRSP07814 1512 aaKnown RBP15.45■□□□□ 0.06
SCN8A-202ENST00000355133 CEBPAP49715 358 aaPredicted RBP15.45■□□□□ 0.06
SCN8A-202ENST00000355133 MAP3K12Q12852 859 aa15.45■□□□□ 0.06
SCN8A-202ENST00000355133 KIAA1328Q86T90 577 aa15.45■□□□□ 0.06
SCN8A-202ENST00000355133 DNAAF4Q8WXU2 420 aa15.45■□□□□ 0.06
SCN8A-202ENST00000355133 MCM4P33991 863 aa15.45■□□□□ 0.06
SCN8A-202ENST00000355133 MAP3K11Q16584 847 aa15.45■□□□□ 0.06
SCN8A-202ENST00000355133 CFAP100Q494V2 611 aa15.45■□□□□ 0.06
SCN8A-202ENST00000355133 SLC5A1P13866 664 aa15.44■□□□□ 0.06
SCN8A-202ENST00000355133 CCDC96Q2M329 555 aa15.44■□□□□ 0.06
SCN8A-202ENST00000355133 ZBTB3Q9H5J0 574 aa15.44■□□□□ 0.06
SCN8A-202ENST00000355133 SYCE3A1L190 88 aa15.44■□□□□ 0.06
SCN8A-202ENST00000355133 CIZ1Q9ULV3 898 aaPredicted RBP15.44■□□□□ 0.06
SCN8A-202ENST00000355133 EPB41L2O43491 1005 aaKnown RBP15.44■□□□□ 0.06
SCN8A-202ENST00000355133 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
SCN8A-202ENST00000355133 C20orf194Q5TEA3 1177 aa15.44■□□□□ 0.06
SCN8A-202ENST00000355133 RPGRQ92834 1020 aaKnown RBP15.44■□□□□ 0.06
SCN8A-202ENST00000355133 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
SCN8A-202ENST00000355133 CD109Q6YHK3 1445 aa15.44■□□□□ 0.06
SCN8A-202ENST00000355133 NEBLO76041 1014 aa15.43■□□□□ 0.06
SCN8A-202ENST00000355133 TNIP1Q15025 636 aa15.43■□□□□ 0.06
SCN8A-202ENST00000355133 SKAP1Q86WV1 359 aa15.43■□□□□ 0.06
SCN8A-202ENST00000355133 ANKRD18BA2A2Z9 1011 aa15.43■□□□□ 0.06
SCN8A-202ENST00000355133 KLHL10Q6JEL2 608 aa15.43■□□□□ 0.06
SCN8A-202ENST00000355133 ZNF444Q8N0Y2 327 aaPredicted RBP15.43■□□□□ 0.06
SCN8A-202ENST00000355133 SCLT1Q96NL6 688 aa15.43■□□□□ 0.06
SCN8A-202ENST00000355133 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
SCN8A-202ENST00000355133 A0A087WZG4 1122 aa15.43■□□□□ 0.06
SCN8A-202ENST00000355133 WASLO00401 505 aaPredicted RBP15.42■□□□□ 0.06
SCN8A-202ENST00000355133 CTCFLQ8NI51 663 aaPredicted RBP15.42■□□□□ 0.06
SCN8A-202ENST00000355133 UBA5Q9GZZ9 404 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 ZRSR2Q15696 482 aaKnown RBP15.42■□□□□ 0.06
SCN8A-202ENST00000355133 NGLY1Q96IV0 654 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 ERLIN1O75477 346 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 ANKRD18AQ8IVF6 992 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 ADGRF5Q8IZF2 1346 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 ZNF213O14771 459 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 TAF4BQ92750 862 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 HSP90AB3PQ58FF7 597 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 C8orf76Q96K31 380 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
SCN8A-202ENST00000355133 LARP6Q9BRS8 491 aaKnown RBP15.41■□□□□ 0.06
SCN8A-202ENST00000355133 HYPKQ9NX55 129 aa15.41■□□□□ 0.06
SCN8A-202ENST00000355133 DESP17661 470 aa15.41■□□□□ 0.06
SCN8A-202ENST00000355133 EXOC5O00471 708 aa15.41■□□□□ 0.06
SCN8A-202ENST00000355133 ARHGAP29Q52LW3 1261 aa15.41■□□□□ 0.06
SCN8A-202ENST00000355133 CC2D2AQ9P2K1 1620 aa15.41■□□□□ 0.06
SCN8A-202ENST00000355133 WDR78Q5VTH9 848 aa15.41■□□□□ 0.06
SCN8A-202ENST00000355133 ZNF397Q8NF99 534 aaPredicted RBP15.41■□□□□ 0.06
SCN8A-202ENST00000355133 PPP1R12BO60237 982 aaPredicted RBP15.4■□□□□ 0.06
SCN8A-202ENST00000355133 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
SCN8A-202ENST00000355133 CCDC196A0A1B0GTZ2 297 aa15.4■□□□□ 0.06
SCN8A-202ENST00000355133 TTLL12Q14166 644 aaPredicted RBP15.4■□□□□ 0.06
SCN8A-202ENST00000355133 MAP3K2Q9Y2U5 619 aa15.4■□□□□ 0.06
SCN8A-202ENST00000355133 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
SCN8A-202ENST00000355133 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms