RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CPLX3Q8WVH0 158 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 WDHD1O75717 1129 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-201ENST00000353414 PLS1Q14651 629 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 FERMT3Q86UX7 667 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 AEBP1Q8IUX7 1158 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 STARD3NLO95772 234 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 ARL1P40616 181 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-201ENST00000353414 KIF20AO95235 890 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 SRCIN1Q9C0H9 1055 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
COL11A1-201ENST00000353414 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
COL11A1-201ENST00000353414 ZNF444Q8N0Y2 327 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-201ENST00000353414 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-201ENST00000353414 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-201ENST00000353414 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
COL11A1-201ENST00000353414 C16orf71Q8IYS4 520 aaPredicted RBP11.68□□□□□ -0.54
COL11A1-201ENST00000353414 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
COL11A1-201ENST00000353414 CCT2P78371 535 aaKnown RBP11.68□□□□□ -0.54
COL11A1-201ENST00000353414 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-201ENST00000353414 CFAP45Q9UL16 551 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 GSTTP1A0A1W2PQM5 241 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 LUC7LQ9NQ29 371 aaKnown RBP11.67□□□□□ -0.54
COL11A1-201ENST00000353414 MAP2K1Q02750 393 aaPredicted RBP11.67□□□□□ -0.54
COL11A1-201ENST00000353414 NBPF1Q3BBV0 1214 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 CCDC83Q8IWF9 413 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 BRPF3Q9ULD4 1205 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 CTNNA2P26232 953 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 PANK2Q9BZ23 570 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 PRDM10Q9NQV6 1147 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 TAF4BQ92750 862 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 AKNAD1Q5T1N1 836 aa11.67□□□□□ -0.54
COL11A1-201ENST00000353414 TMCO5BA8MYB1 307 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
COL11A1-201ENST00000353414 PRPF4BQ13523 1007 aaKnown RBP11.66□□□□□ -0.54
COL11A1-201ENST00000353414 IMMTQ16891 758 aaKnown RBP11.66□□□□□ -0.54
COL11A1-201ENST00000353414 SMC1AQ14683 1233 aaKnown RBP11.66□□□□□ -0.54
COL11A1-201ENST00000353414 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 WAPLQ7Z5K2 1190 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 CUL5Q93034 780 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 EPB41L2O43491 1005 aaKnown RBP11.66□□□□□ -0.54
COL11A1-201ENST00000353414 CCDC192P0DO97 292 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 CEBPAP49715 358 aaPredicted RBP11.66□□□□□ -0.54
COL11A1-201ENST00000353414 CACNA2D4Q7Z3S7 1137 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 KIF7Q2M1P5 1343 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 CKAP2LQ8IYA6 745 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 CCDC150Q8NCX0 1101 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
COL11A1-201ENST00000353414 TRMT112Q9UI30 125 aaKnown RBP11.66□□□□□ -0.54
COL11A1-201ENST00000353414 PDCP20941 246 aa11.65□□□□□ -0.54
COL11A1-201ENST00000353414 BICD1Q96G01 975 aa11.65□□□□□ -0.54
COL11A1-201ENST00000353414 PPP2R1AP30153 589 aa11.65□□□□□ -0.54
COL11A1-201ENST00000353414 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
COL11A1-201ENST00000353414 LMAN1P49257 510 aa11.65□□□□□ -0.54
COL11A1-201ENST00000353414 LARP1Q6PKG0 1096 aaKnown RBP11.65□□□□□ -0.54
COL11A1-201ENST00000353414 HOMER2Q9NSB8 354 aa11.65□□□□□ -0.54
COL11A1-201ENST00000353414 ZNF652Q9Y2D9 606 aa11.65□□□□□ -0.54
COL11A1-201ENST00000353414 ATP2B3Q16720 1220 aa11.65□□□□□ -0.55
COL11A1-201ENST00000353414 IQSEC3Q9UPP2 1182 aaPredicted RBP11.65□□□□□ -0.55
COL11A1-201ENST00000353414 PIP4K2AP48426 406 aaPredicted RBP11.64□□□□□ -0.55
COL11A1-201ENST00000353414 NAPBQ9H115 298 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 TCERG1LQ5VWI1 586 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
COL11A1-201ENST00000353414 ZMYND15Q9H091 742 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 GRIPAP1Q4V328 841 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 DMRT2Q9Y5R5 561 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 SYCP3Q8IZU3 236 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 CEP63Q96MT8 703 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 UPF3BQ9BZI7 483 aaKnown RBP11.64□□□□□ -0.55
COL11A1-201ENST00000353414 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
COL11A1-201ENST00000353414 NLRP5P59047 1200 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 KRT85P78386 507 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 GIMAP7Q8NHV1 300 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 TRERF1Q96PN7 1200 aa11.64□□□□□ -0.55
COL11A1-201ENST00000353414 SKAP1Q86WV1 359 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 F6X3S4 739 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 HAND2P61296 217 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 PICALMQ13492 652 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 BIN2Q9UBW5 565 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-201ENST00000353414 ATP5J2-PTCD1G3V325 749 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
COL11A1-201ENST00000353414 PRKCSHP14314 528 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-201ENST00000353414 ANKRD1Q15327 319 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 PRPF40BQ6NWY9 871 aaKnown RBP11.63□□□□□ -0.55
COL11A1-201ENST00000353414 CCDC91Q7Z6B0 441 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-201ENST00000353414 JAG2Q9Y219 1238 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 GRIN2BQ13224 1484 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 OTUD6BQ8N6M0 293 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 GNAT3A8MTJ3 354 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 RABEP1Q15276 862 aa11.63□□□□□ -0.55
COL11A1-201ENST00000353414 TDRD12Q587J7 1177 aaKnown RBP11.63□□□□□ -0.55
COL11A1-201ENST00000353414 RTEL1-TNFRSF6BF6WH68 1400 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms