RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 GAS2L3Q86XJ1 694 aa20.53■□□□□ 0.88
PDAP1-201ENST00000350498 ANXA1P04083 346 aa20.52■□□□□ 0.88
PDAP1-201ENST00000350498 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
PDAP1-201ENST00000350498 STK31Q9BXU1 1019 aa20.52■□□□□ 0.88
PDAP1-201ENST00000350498 EIF2S2P20042 333 aaKnown RBP20.52■□□□□ 0.87
PDAP1-201ENST00000350498 HAP1P54257 671 aaPredicted RBP20.51■□□□□ 0.87
PDAP1-201ENST00000350498 SSFA2P28290 1259 aa20.5■□□□□ 0.87
PDAP1-201ENST00000350498 PSME1Q06323 249 aa20.5■□□□□ 0.87
PDAP1-201ENST00000350498 LMOD2Q6P5Q4 547 aa20.5■□□□□ 0.87
PDAP1-201ENST00000350498 GRPEL1Q9HAV7 217 aa20.5■□□□□ 0.87
PDAP1-201ENST00000350498 MAP3K5Q99683 1374 aa20.49■□□□□ 0.87
PDAP1-201ENST00000350498 DDX11L8A8MPP1 907 aa20.49■□□□□ 0.87
PDAP1-201ENST00000350498 RAB3GAP1Q15042 981 aa20.49■□□□□ 0.87
PDAP1-201ENST00000350498 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
PDAP1-201ENST00000350498 USP26Q9BXU7 913 aa20.49■□□□□ 0.87
PDAP1-201ENST00000350498 CCT4P50991 539 aaKnown RBP20.48■□□□□ 0.87
PDAP1-201ENST00000350498 CCDC30Q5VVM6 783 aa20.48■□□□□ 0.87
PDAP1-201ENST00000350498 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
PDAP1-201ENST00000350498 ANKARQ7Z5J8 1434 aa20.48■□□□□ 0.87
PDAP1-201ENST00000350498 K7ELQ4 463 aaPredicted RBP20.48■□□□□ 0.87
PDAP1-201ENST00000350498 ANKLE2Q86XL3 938 aa20.48■□□□□ 0.87
PDAP1-201ENST00000350498 GNAI2P04899 355 aa20.47■□□□□ 0.87
PDAP1-201ENST00000350498 MPRIPQ6WCQ1 1025 aa20.47■□□□□ 0.87
PDAP1-201ENST00000350498 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
PDAP1-201ENST00000350498 LTN1O94822 1766 aa20.46■□□□□ 0.87
PDAP1-201ENST00000350498 PDE1AP54750 535 aa20.46■□□□□ 0.87
PDAP1-201ENST00000350498 HDGFL1Q5TGJ6 251 aa20.46■□□□□ 0.87
PDAP1-201ENST00000350498 USP44Q9H0E7 712 aa20.46■□□□□ 0.87
PDAP1-201ENST00000350498 MRE11P49959 708 aa20.45■□□□□ 0.86
PDAP1-201ENST00000350498 IP6K1Q92551 441 aa20.45■□□□□ 0.86
PDAP1-201ENST00000350498 ERBB4Q15303 1308 aa20.44■□□□□ 0.86
PDAP1-201ENST00000350498 HTATSF1O43719 755 aaKnown RBP20.44■□□□□ 0.86
PDAP1-201ENST00000350498 IL1RAPL2Q9NP60 686 aa20.44■□□□□ 0.86
PDAP1-201ENST00000350498 LRRC37A3O60309 1634 aa20.43■□□□□ 0.86
PDAP1-201ENST00000350498 PKP1Q13835 747 aa20.43■□□□□ 0.86
PDAP1-201ENST00000350498 PRAMEF22A3QJZ6 481 aa20.43■□□□□ 0.86
PDAP1-201ENST00000350498 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
PDAP1-201ENST00000350498 HMMRO75330 724 aa20.42■□□□□ 0.86
PDAP1-201ENST00000350498 UNC5CLQ8IV45 518 aa20.42■□□□□ 0.86
PDAP1-201ENST00000350498 CHPF2Q9P2E5 772 aa20.42■□□□□ 0.86
PDAP1-201ENST00000350498 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
PDAP1-201ENST00000350498 CHD2O14647 1828 aaKnown RBP20.42■□□□□ 0.86
PDAP1-201ENST00000350498 CHAMP1Q96JM3 812 aa20.41■□□□□ 0.86
PDAP1-201ENST00000350498 AXIN2Q9Y2T1 843 aa20.41■□□□□ 0.86
PDAP1-201ENST00000350498 ATP8B2P98198 1209 aa20.41■□□□□ 0.86
PDAP1-201ENST00000350498 MAP4K4O95819 1239 aaPredicted RBP20.4■□□□□ 0.86
PDAP1-201ENST00000350498 NBPF7P0C2Y1 421 aaPredicted RBP20.4■□□□□ 0.86
PDAP1-201ENST00000350498 EIF4A1P60842 406 aaKnown RBP20.4■□□□□ 0.86
PDAP1-201ENST00000350498 DDX17Q92841 729 aaKnown RBP20.4■□□□□ 0.86
PDAP1-201ENST00000350498 CIZ1Q9ULV3 898 aaPredicted RBP20.4■□□□□ 0.86
PDAP1-201ENST00000350498 NUTM1Q86Y26 1132 aa20.39■□□□□ 0.85
PDAP1-201ENST00000350498 LRRCC1Q9C099 1032 aa20.39■□□□□ 0.85
PDAP1-201ENST00000350498 GCP02774 474 aa20.38■□□□□ 0.85
PDAP1-201ENST00000350498 ZNF530Q6P9A1 599 aaPredicted RBP20.38■□□□□ 0.85
PDAP1-201ENST00000350498 RILPL2Q969X0 211 aa20.38■□□□□ 0.85
PDAP1-201ENST00000350498 IL25Q9H293 177 aa20.38■□□□□ 0.85
PDAP1-201ENST00000350498 SALL3Q9BXA9 1300 aa20.38■□□□□ 0.85
PDAP1-201ENST00000350498 NFAT5O94916 1531 aa20.38■□□□□ 0.85
PDAP1-201ENST00000350498 PI4KAP2A4QPH2 592 aa20.37■□□□□ 0.85
PDAP1-201ENST00000350498 ZGPATQ8N5A5 531 aaKnown RBP20.37■□□□□ 0.85
PDAP1-201ENST00000350498 PI4KAP1Q8N8J0 262 aa20.37■□□□□ 0.85
PDAP1-201ENST00000350498 GNAI3P08754 354 aa20.37■□□□□ 0.85
PDAP1-201ENST00000350498 NAP1L5Q96NT1 182 aaPredicted RBP20.37■□□□□ 0.85
PDAP1-201ENST00000350498 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
PDAP1-201ENST00000350498 UBTFL1P0CB47 393 aaPredicted RBP20.36■□□□□ 0.85
PDAP1-201ENST00000350498 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
PDAP1-201ENST00000350498 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
PDAP1-201ENST00000350498 PXDNQ92626 1479 aa20.36■□□□□ 0.85
PDAP1-201ENST00000350498 BAG4O95429 457 aaKnown RBP20.36■□□□□ 0.85
PDAP1-201ENST00000350498 MX1P20591 662 aa20.36■□□□□ 0.85
PDAP1-201ENST00000350498 PPP1R42Q7Z4L9 355 aa20.36■□□□□ 0.85
PDAP1-201ENST00000350498 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
PDAP1-201ENST00000350498 PALD1Q9ULE6 856 aa20.35■□□□□ 0.85
PDAP1-201ENST00000350498 OSBPL3Q9H4L5 887 aa20.35■□□□□ 0.85
PDAP1-201ENST00000350498 CLCN1P35523 988 aa20.34■□□□□ 0.85
PDAP1-201ENST00000350498 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
PDAP1-201ENST00000350498 RABEP1Q15276 862 aa20.34■□□□□ 0.85
PDAP1-201ENST00000350498 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
PDAP1-201ENST00000350498 MCTP1Q6DN14 999 aa20.34■□□□□ 0.85
PDAP1-201ENST00000350498 NOL8Q76FK4 1167 aaKnown RBP20.34■□□□□ 0.85
PDAP1-201ENST00000350498 ERC2O15083 957 aa20.33■□□□□ 0.85
PDAP1-201ENST00000350498 TEFQ10587 303 aa20.33■□□□□ 0.85
PDAP1-201ENST00000350498 DDX49Q9Y6V7 483 aaKnown RBP20.33■□□□□ 0.85
PDAP1-201ENST00000350498 ADGRL3Q9HAR2 1447 aa20.33■□□□□ 0.85
PDAP1-201ENST00000350498 SURF6O75683 361 aaKnown RBP20.33■□□□□ 0.84
PDAP1-201ENST00000350498 ANKRD24Q8TF21 1146 aa20.33■□□□□ 0.84
PDAP1-201ENST00000350498 ARHGEF25Q86VW2 580 aa20.32■□□□□ 0.84
PDAP1-201ENST00000350498 SRCIN1Q9C0H9 1055 aa20.32■□□□□ 0.84
PDAP1-201ENST00000350498 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
PDAP1-201ENST00000350498 FOXD4L5Q5VV16 416 aaPredicted RBP20.32■□□□□ 0.84
PDAP1-201ENST00000350498 CASC1Q6TDU7 716 aa20.32■□□□□ 0.84
PDAP1-201ENST00000350498 FOXD4L4Q8WXT5 416 aaPredicted RBP20.32■□□□□ 0.84
PDAP1-201ENST00000350498 NCLP19338 710 aaKnown RBP20.31■□□□□ 0.84
PDAP1-201ENST00000350498 USP54Q70EL1 1684 aa20.31■□□□□ 0.84
PDAP1-201ENST00000350498 ESPNB1AK53 854 aa20.31■□□□□ 0.84
PDAP1-201ENST00000350498 SRGAP3O43295 1099 aa20.31■□□□□ 0.84
PDAP1-201ENST00000350498 BEND3Q5T5X7 828 aa20.31■□□□□ 0.84
PDAP1-201ENST00000350498 ESYT1Q9BSJ8 1104 aa20.3■□□□□ 0.84
PDAP1-201ENST00000350498 RNMTO43148 476 aaKnown RBP20.3■□□□□ 0.84
PDAP1-201ENST00000350498 CHMLP26374 656 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms