RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 USP32Q8NFA0 1604 aa13.15□□□□□ -0.3
STAU1-202ENST00000347458 ELF2Q15723 593 aa13.15□□□□□ -0.3
STAU1-202ENST00000347458 CEP135Q66GS9 1140 aa13.15□□□□□ -0.3
STAU1-202ENST00000347458 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
STAU1-202ENST00000347458 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
STAU1-202ENST00000347458 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
STAU1-202ENST00000347458 LUZP1Q86V48 1076 aa13.15□□□□□ -0.31
STAU1-202ENST00000347458 ZNF428Q96B54 188 aa13.15□□□□□ -0.31
STAU1-202ENST00000347458 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
STAU1-202ENST00000347458 DRC7Q8IY82 874 aa13.14□□□□□ -0.31
STAU1-202ENST00000347458 TSPYL1Q9H0U9 437 aa13.14□□□□□ -0.31
STAU1-202ENST00000347458 MYOM2P54296 1465 aa13.14□□□□□ -0.31
STAU1-202ENST00000347458 MYO3AQ8NEV4 1616 aa13.14□□□□□ -0.31
STAU1-202ENST00000347458 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
STAU1-202ENST00000347458 SAFB2Q14151 953 aaKnown RBP eCLIP13.13□□□□□ -0.31
STAU1-202ENST00000347458 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 USP27XA6NNY8 438 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 ANKRD44Q8N8A2 993 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 GTF3C6Q969F1 213 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
STAU1-202ENST00000347458 ERBB3P21860 1342 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 RGS12O14924 1447 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
STAU1-202ENST00000347458 NPHP1O15259 732 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 CCDC192P0DO97 292 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 TSHZ3Q63HK5 1081 aa13.13□□□□□ -0.31
STAU1-202ENST00000347458 CACTINQ8WUQ7 758 aaKnown RBP13.13□□□□□ -0.31
STAU1-202ENST00000347458 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
STAU1-202ENST00000347458 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
STAU1-202ENST00000347458 CHMP4CQ96CF2 233 aa13.12□□□□□ -0.31
STAU1-202ENST00000347458 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
STAU1-202ENST00000347458 FAM193AP78312 1265 aa13.12□□□□□ -0.31
STAU1-202ENST00000347458 ESYT1Q9BSJ8 1104 aa13.12□□□□□ -0.31
STAU1-202ENST00000347458 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.12□□□□□ -0.31
STAU1-202ENST00000347458 DTNBO60941 627 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 NFATC2IPQ8NCF5 419 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 MRVI1Q9Y6F6 885 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 CHRM1P11229 460 aaPredicted RBP13.11□□□□□ -0.31
STAU1-202ENST00000347458 TMEM132EQ6IEE7 984 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 SECISBP2LQ93073 1101 aaKnown RBP13.11□□□□□ -0.31
STAU1-202ENST00000347458 INO80Q9ULG1 1556 aaPredicted RBP13.11□□□□□ -0.31
STAU1-202ENST00000347458 PLCH2O75038 1416 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 SYT1P21579 422 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 CCDC144BQ3MJ40 725 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
STAU1-202ENST00000347458 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
STAU1-202ENST00000347458 STX6O43752 255 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 MCCP23508 829 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 DNM1Q05193 864 aaKnown RBP13.1□□□□□ -0.31
STAU1-202ENST00000347458 CREBRFQ8IUR6 639 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 F13A1P00488 732 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 ZNF75DP51815 510 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 PDE1AP54750 535 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 CAMK4Q16566 473 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 API5Q9BZZ5 524 aaKnown RBP13.1□□□□□ -0.31
STAU1-202ENST00000347458 TRIM5Q9C035 493 aa13.1□□□□□ -0.31
STAU1-202ENST00000347458 ANAPC15P60006 121 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 SLFNL1Q499Z3 407 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 NEK11Q8NG66 645 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 NSD2O96028 1365 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 UGGT1Q9NYU2 1555 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
STAU1-202ENST00000347458 TYRO3Q06418 890 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 ARHGEF40Q8TER5 1519 aa13.09□□□□□ -0.31
STAU1-202ENST00000347458 ARID5BQ14865 1188 aa13.08□□□□□ -0.31
STAU1-202ENST00000347458 TWISTNBQ3B726 338 aaPredicted RBP13.08□□□□□ -0.31
STAU1-202ENST00000347458 MBIPQ9NS73 344 aa13.08□□□□□ -0.31
STAU1-202ENST00000347458 BMS1Q14692 1282 aaKnown RBP13.08□□□□□ -0.32
STAU1-202ENST00000347458 TMX1Q9H3N1 280 aa13.08□□□□□ -0.32
STAU1-202ENST00000347458 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.32
STAU1-202ENST00000347458 NYAP1Q6ZVC0 841 aa13.08□□□□□ -0.32
STAU1-202ENST00000347458 RPAP2Q8IXW5 612 aaPredicted RBP13.08□□□□□ -0.32
STAU1-202ENST00000347458 EFCC1Q9HA90 598 aa13.08□□□□□ -0.32
STAU1-202ENST00000347458 CLIP2Q9UDT6 1046 aa13.08□□□□□ -0.32
STAU1-202ENST00000347458 PLA2G4AP47712 749 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 PTPN14Q15678 1187 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 ANO6Q4KMQ2 910 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 CKAP2LQ8IYA6 745 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 ZC3H13Q5T200 1668 aaKnown RBP13.07□□□□□ -0.32
STAU1-202ENST00000347458 DIAPH1O60610 1272 aaKnown RBP13.07□□□□□ -0.32
STAU1-202ENST00000347458 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 NOP2P46087 812 aaKnown RBP13.07□□□□□ -0.32
STAU1-202ENST00000347458 SYT10Q6XYQ8 523 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 RAD50Q92878 1312 aa13.07□□□□□ -0.32
STAU1-202ENST00000347458 H2AFXP16104 143 aaPredicted RBP13.06□□□□□ -0.32
STAU1-202ENST00000347458 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms